CN188095

Overview
NameCN188095
Unique NameCN188095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C2_SCHPO (Protein phosphatase 2C homolog 2 OS=Schizosaccharomyces pombe GN=ptc2 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.386e-48
Identity = 103/179 (57.54%), Postives = 125/179 (69.83%), Query Frame = -1
Query:  271 DFHGPTSGSTACVAIIRDKQLVV-ANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAG--GEGCDNMTMILVQF 798
            D     SG TA  A+I D Q++  ANAGDSR VL RKG A  LS DHKP+ +VEK RI  AGGFI  GRVNGSL L+RAIGD E+K + SLP EKQIVTA PD+    +  DDEFL++ACDGIWDC SSQ++V+FVR  +     L VICE + DRC+A ++   G GCDNMT+ +V F
Sbjct:  113 DMQEDPSGCTATTALIVDHQVIYCANAGDSRTVLGRKGTAEPLSFDHKPNNDVEKARITAAGGFIDFGRVNGSLALSRAIGDFEYKKDSSLPPEKQIVTAFPDVVIHNIDPDDEFLILACDGIWDCKSSQQVVEFVRRGIVARQSLEVICENLMDRCIASNSESCGIGCDNMTICIVAF 291          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C1_CAEEL (Probable protein phosphatase 2C F42G9.1 OS=Caenorhabditis elegans GN=F42G9.1 PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.434e-45
Identity = 90/175 (51.43%), Postives = 124/175 (70.86%), Query Frame = -1
Query:  271 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGE--GCDNMTMILVQF 789
            G  SG+TACV ++   +++VANAGDSR VL R G+A++LS DHKP+ EVE +RI  AGG I+ GRVNG LNL+RA GD  +K N+ L  ++Q++TA PD+    L  +DEF+V+ACDGIW+ + SQ++VDFVRD L   +  + +C+ + D CLA S  G+  GCDNMT+I   F
Sbjct:  312 GEDSGTTACVCLVGKDKVIVANAGDSRAVLCRNGKAVDLSVDHKPEDEVETNRIHAAGGQIEDGRVNGGLNLSRAFGDHAYKKNQELGLKEQMITALPDVKIEALTPEDEFIVVACDGIWNSMESQQVVDFVRDLLAKGSSCAEVCDALCDACLADSTDGDGTGCDNMTVICTTF 486          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C3_SCHPO (Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe GN=ptc3 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.117e-45
Identity = 100/187 (53.48%), Postives = 121/187 (64.71%), Query Frame = -1
Query:  241 FHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLA--PSAGGEGCDNMTMILVQFKILSNNGPSA 795
            FH   SG TA V +    +L  ANAGDSR VL  KG A  LS DHKP  E EK RI  AGGF+  GRVNG+L L+RAIGD EFK N +L  EKQIVTA PD+   E+ DDDEF+V+ACDGIWDC +SQ++++FVR  +   T L  I E + D C+A      G GCDNMT+ +V   +L  N  SA
Sbjct:  113 FHTDPSGCTATVVLRVGNKLYCANAGDSRTVLGSKGIAKPLSADHKPSNEAEKARICAAGGFVDFGRVNGNLALSRAIGDFEFK-NSNLEPEKQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQQVIEFVRRGIVAGTSLEKIAENLMDNCIASDTETTGLGCDNMTVCIV--ALLQENDKSA 296          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.342e-43
Identity = 90/170 (52.94%), Postives = 120/170 (70.59%), Query Frame = -1
Query:  277 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSA--GGEGCDNMTMILV 780
            SG+TA V +I++  +   NAGDSR V S  G+A  LS DHKP  E E  RI+ AGG+++  RVNG+L L+RA+GD  FK   + PAE+QIVTA PD+ T +L  D EF+V+ACDGIWD +++QE+VDFVR++L  +     ICE++  RCLAP    GG GCDNMT++LV
Sbjct:  115 SGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRIIAAGGWVEFNRVNGNLALSRALGDFAFKNCDTKPAEEQIVTAFPDVITDKLTPDHEFIVLACDGIWDVMTNQEVVDFVREKLAEKRDPQSICEELLTRCLAPDCQMGGLGCDNMTVVLV 284          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 172.17 bits (435), Expect = 3.306e-42
Identity = 94/207 (45.41%), Postives = 131/207 (63.29%), Query Frame = -1
Query:  184 GPTS-GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGR----VNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQSKLASSSAGT 789
            GP + G TACV +IR+ Q+VV NAGD+RCV+SR GQA+ LS DHKP+   E  RI+ AGG +   R    VN  + ++RAIGD+ +K NK L  E+Q++T +P+I   +L DD EFLVIACDG+WD L++Q +VDFVR  L N  +LSVICE +    +  +      DNM++ILV+F             P  ++ ++ A+SS  T
Sbjct:  146 GPLAEGCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDLSYKNNKKLRPEQQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFVRLHLNNGVELSVICESLLQEAI--TRDPPSTDNMSVILVRFL-----------HPEGNRGARAATSSTST 339          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.655e-41
Identity = 84/172 (48.84%), Postives = 118/172 (68.60%), Query Frame = -1
Query:  268 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAG-GEGCDNMTMILVQFK 780
            +G TA VA+I  K L VANAGDSR  L+R G+  ++SKDHKPD E EK RI +AGGF+  GRVNG+L+L+RA+GD+E+K +     E+QI+TA PD+   +L   D+FL++ CDG+++    Q++++F+  +L N   L    EK+ D+ LA     G GCDNMT IL+QFK
Sbjct:  124 AGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDEQEKKRIERAGGFVSDGRVNGNLSLSRALGDLEYKKDNRFKPEEQIITALPDVKVTQLSAADKFLLMGCDGVFETWDHQQILNFINSELKNTQNLQKAAEKLLDQLLAKDTSLGTGCDNMTCILIQFK 295          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.176e-39
Identity = 87/190 (45.79%), Postives = 117/190 (61.58%), Query Frame = -1
Query:  211 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL-TNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQS 777
            GSTACV IIR  Q++V N GDSRCVLS+ GQA++LS DHKP  E E++RI +AGG + + R+ G L  +RAIGD  +K N+++P  +Q+VT  PDI    + DD EFLVIA DG+WD + +  +V FVR +L   E  L   CEK+   CL  +      DN T ILV+FK +  +    A      Q +
Sbjct:  142 GSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVFLQRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQELRPGEENLRETCEKLVGHCLHSN------DNATAILVKFKPIEEDPDEVASARDEHQHN 325          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C5_PARTE (Probable protein phosphatase 2C 5 OS=Paramecium tetraurelia GN=GSPATT00010582001 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.835e-39
Identity = 81/172 (47.09%), Postives = 116/172 (67.44%), Query Frame = -1
Query:  268 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAG-GEGCDNMTMILVQFK 780
            +G TA VA+I  K L VANAGDSR  L+R G+  ++SKDHKPD + EK RI +AGGF+  GR NG+L+L+RA+GD+E+K +     E+QI++A PD+   +L   D+FL++ CDG+++    Q++++FV  +L +   L    EK+ D+ LA     G GCDNMT ILV FK
Sbjct:  124 AGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDDQEKKRIERAGGFVSDGRANGNLSLSRALGDLEYKKDSRFKPEEQIISALPDVKVTQLTASDKFLLMGCDGVFETWDHQQILNFVNQELKSSQNLQKATEKLLDQLLAKDTSLGTGCDNMTCILVLFK 295          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C2_YEAST (Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae GN=PTC2 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.437e-37
Identity = 88/173 (50.87%), Postives = 111/173 (64.16%), Query Frame = -1
Query:  277 SGSTACVAIIRDKQ--LVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL-CDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGE--GCDNMTMILV 780
            SG TA   ++   Q  LV  NAGDSR VL+  G A  LS DHKP L  EK RI+ A GF+++ RVNG+L L+RAIGD EFK N  L  E+QIVT  PDI    L  D DEF+++ACDGIWDCL+SQ+ VD V   L     L+ I  ++ D C AP+  G   GCDNM++++V
Sbjct:  118 SGCTATSILVSKSQNLLVCGNAGDSRTVLATDGNAKALSYDHKPTLASEKSRIVAADGFVEMDRVNGNLALSRAIGDFEFKSNPKLGPEEQIVTCVPDILEHSLDYDRDEFVILACDGIWDCLTSQDCVDLVHLGLREGKTLNEISSRIIDVCCAPTTEGTGIGCDNMSIVVV 290          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C3_PARTE (Probable protein phosphatase 2C 3 OS=Paramecium tetraurelia GN=GSPATT00031056001 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.202e-37
Identity = 84/176 (47.73%), Postives = 113/176 (64.20%), Query Frame = -1
Query:  268 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTN----ETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK 780
            +G TA VA+I    L VANAGDSR VL R     ++S DHKPD   EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L   +Q++ A PD+   EL   D+F+++ CDG+++ L+ QEL+  V   L N    E  LS   E + D+ LAP ++ G GCDNMT ILV  K
Sbjct:  124 AGCTANVALIHKNTLYVANAGDSRSVLCRNNTNFDMSVDHKPDNNEEKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKSDSKLRPNEQLIIAFPDVKKTELTPQDKFILMGCDGVFETLNHQELLKHVNTTLGNSPVTENLLSKAAEDLLDQLLAPDTSQGTGCDNMTTILVYLK 299          
The following BLAST results are available for this feature:
BLAST of CN188095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
PP2C2_SCHPO1.386e-4857.54Protein phosphatase 2C homolog 2 OS=Schizosaccharo... [more]
PP2C1_CAEEL1.434e-4551.43Probable protein phosphatase 2C F42G9.1 OS=Caenorh... [more]
PP2C3_SCHPO7.117e-4553.48Protein phosphatase 2C homolog 3 OS=Schizosaccharo... [more]
PP2C2_CAEEL1.342e-4352.94Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
P2C42_ORYSJ3.306e-4245.41Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]
PP2C6_PARTE3.655e-4148.84Probable protein phosphatase 2C 6 OS=Paramecium te... [more]
P2C21_ORYSJ1.176e-3945.79Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
PP2C5_PARTE5.835e-3947.09Probable protein phosphatase 2C 5 OS=Paramecium te... [more]
PP2C2_YEAST1.437e-3750.87Protein phosphatase 2C homolog 2 OS=Saccharomyces ... [more]
PP2C3_PARTE3.202e-3747.73Probable protein phosphatase 2C 3 OS=Paramecium te... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188095 ID=CN188095; Name=CN188095; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTAGGATATCTATCCCATTAAAATGAAAAAGCTTAAATAT
TTACAACCAAATCATGAGAATCGTTTTCCGAATGTAAAATCAGGGACCAT
GGTTCTGAGCTCAGCAGTGTTTCAGACAGTAGAAAATGAGTACCATTTAG
TCAGTGCAAAGAGTGCTACAGCTAATTCGATTCAGTCCCTGCTGAACTGC
TGGCTAACTTGGATTGTTGGTCAGATGGTGGCTGCTCAGCCGCAGAAGGA
CCATTATTAGAAAGAATTTTAAACTGAACCAAGATCATGGTCATGTTGTC
GCATCCTTCACCACCAGCTGATGGAGCCAAGCACCGATCGAATACTTTCT
CGCAAATGACTGATAGTTTTGTTTCGTTGGTTAATTGATCCCTGACAAAA
TCGACAAGTTCTTGACTTGAAAGGCAATCCCAAATCCCATCACAAGCTAT
GACAAGAAACTCATCGTCATCACAAAGTTCAATAGTACTTATATCAGGAT
TGGCAGTCACAATCTGTTTTTCAGCAGGCAAACTTTTGTTTAGCTTGAAC
TCCACATCTCCAATAGCTCTCGCCAAATTTAAACTTCCATTAACACGTCC
AACTTGTATAAAACCACCAGCTTTGAGAATTCTATCTTTCTCAACCTCAA
GATCAGGCTTATGGTCTTTAGATAGATTAAGTGCCTGGCCCTTCCTCGAT
AACACACAACGAGAATCACCAGCATTTGCAACCACGAGTTGCTTGTCTCT
AATGATTGCTACGCAAGCTGTACTTCCAGAAGTTGGTCCATGAAAATCTG
AGTGAGGACCCTCCTCCGATGCCCAATCGTCAAAATGATCATT
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