CN188095

Overview
NameCN188095
Unique NameCN188095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11
Identity = 62/210 (29.52%), Postives = 98/210 (46.67%), Query Frame = -1
Query:  211 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSK-----DHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNET--KLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQS 780
            SGSTA   + +   LVV N GDSR ++  +  A NL+      D KP+L  E  RI +  G +       +V RV      +  L +ARA GD   K       +  +++  P IS   L + DEF+++A DG+WD LS++E VD V    +  T  +  V C     R   P++  + C  + + L   K      P   ++  S++++
Sbjct:  223 SGSTAVTLVKQGLDLVVGNLGDSRAIMGTRDAANNLTAVQLTVDLKPNLPREAARIQQCRGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLK-------DYGLISV-PQISYRRLTEKDEFIILATDGVWDVLSNKEAVDIVAAAPSRATAARALVDCAVRSWRLKFPTSKSDDCAVVCLFLDHAK-----SPDLIQENESEEET 419          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C74_ARATH (Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11
Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = -1
Query:  394 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFV 780
            SG+TA   + + + LV+ N GDSR VL  + +        L++D KPD+  E +RI +  G I        V R+      +  L +ARA GD   K       +  +++  PD+S   L + DEF+V+A DGIWD L+++E+V  V
Sbjct:  206 SGTTAVTMVKQGQHLVIGNIGDSRAVLGVRNKDNKLVPFQLTEDLKPDVPAEAERIKRCRGRIFALRDEPGVARLWLPNHNSPGLAMARAFGDFCLK-------DFGLISV-PDVSYRRLTEKDEFVVLATDGIWDALTNEEVVKIV 344          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C61_ARATH (Probable protein phosphatase 2C 61 OS=Arabidopsis thaliana GN=At4g32950 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11
Identity = 50/147 (34.01%), Postives = 74/147 (50.34%), Query Frame = -1
Query:  394 SGSTACVAIIRDKQLVVANAGDSRCVL---SRKGQA--LNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFV 780
            SG+TA +A+    Q++VAN GDSR V+   S  G+     L+ D KP +  E +RI K  G +        + RV         L ++RA GD   K           V A P +ST ++   D+FL++A DG+WD LS++E+   V
Sbjct:  138 SGTTAVLAVKHGNQVMVANLGDSRAVMIGTSEDGETKVAQLTNDLKPSVPSEAERIRKRNGRVLALESEPHILRVWLPTENRPGLAMSRAFGDFLLK--------SYGVIATPQVSTHQITSSDQFLLLASDGVWDVLSNEEVATVV 276          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C46_ARATH (Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11
Identity = 53/164 (32.32%), Postives = 78/164 (47.56%), Query Frame = -1
Query:  376 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQA------LNLSKDHKPDLEVEKDRI------------LKAGGFIQVGRVNGSLNLARAIGDVEFK---LNKSL---------PAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTN 777
            GS   V +I    L +AN GDSR VL R  +A      L LS +H   +E  +  +            LK      V RV G + ++R+IGDV  K    NK           P ++ I++  P I+  E+   D+FL+ A DG+W+ +S+QE VD V++   N
Sbjct:  147 GSCCLVGVICGGMLYIANVGDSRAVLGRAMKATGEVIALQLSAEHNVSIESVRQEMHSLHPDDSHIVMLKHN----VWRVKGLIQISRSIGDVYLKKAEFNKEPLYTKYRIREPFKRPILSGEPTITEHEIQPQDKFLIFASDGLWEQMSNQEAVDIVQNHPRN 306          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C38_ARATH (Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 54/154 (35.06%), Postives = 74/154 (48.05%), Query Frame = -1
Query:  394 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQA------LNLSKDHKPDLE-----------------VEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAE---KQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFV 777
            G+   V II    L +ANAGDSR VL R  +A      + LS +H   LE                 V K ++ +  G IQV R  G   L +A  + E  L K    E   K I+ A P I+  ++  +D+FL+ A DG+W+ LS+QE VD V
Sbjct:  151 GACCLVGIICSGLLYIANAGDSRVVLGRLEKAFKIVKAVQLSSEHNASLESVREELRSLHPNDPQIVVLKHKVWRVKGIIQVSRSIGDAYLKKAEFNREPLLAKFRVPEVFHKPILRAEPAITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIV 304          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C14_ORYSJ (Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 60/227 (26.43%), Postives = 102/227 (44.93%), Query Frame = -1
Query:  175 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFD--RCLAPSAGGEGCDNMTMILVQFKILSNNGPSA-----AEQPPSDQQSKLASSSAGTESN 780
            SG+TA   + + + L++ N GDSR +L  + +     A+ L+ D KP++  E  RI +  G I       +V RV      +  L +ARA GD   K           + + P++S   + + DEF+V+A DG+WD LS+ E+V  V    +  +   ++ E      R   P++  + C  + + L   ++   +   A     A +  S Q S     S G  S+
Sbjct:  259 SGTTAVAVLKQGRNLIIGNLGDSRAILGTRDKDNQLMAVQLTVDLKPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLK--------DYGLISMPEVSYHRITEKDEFVVLATDGVWDVLSNTEVVSIVNRATSRASAARLLVESAHRAWRARFPTSKIDDCAVVCLFLDTDELSETSSSMARDMTNAVEVSSGQHSNTIQLSTGVSSD 477          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C15_ORYSJ (Probable protein phosphatase 2C 15 OS=Oryza sativa subsp. japonica GN=Os02g0567200 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.723e-11
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = -1
Query:  412 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEK-DRILKAGGFIQVGRVN--------------GSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQ 783
            +SG+T    II    + VA+ GDSRCVL  +G   +LS DH+ D   E+ DR+ ++GG   VGR+N              G L L+R+IGD +           Q +   P +  ++L      L+I+ DG+WD L+++
Sbjct:  137 SSGTTVTFVIIDGLFITVASVGDSRCVLEAEGSIYHLSADHRFDASKEEVDRVTESGG--DVGRLNVVGGAEIGPLRCWPGGLCLSRSIGDQDV---------GQFIVPVPYVKQVKLSTAGGRLIISSDGVWDVLTAE 264          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C01_ARATH (Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.723e-11
Identity = 55/165 (33.33%), Postives = 77/165 (46.67%), Query Frame = -1
Query:  394 FDDWASEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFV 834
            F+    E   H +     SG TA   I +   L + N GDSR +L  K       A+ L+ D KPDL  E +RI +  G +       +V RV         L +ARA GD   K           V + P+ S   L D D+F+V+A DG+WD LS++E+V+ V
Sbjct:  166 FNAMDKELRSHPNLECFCSGCTAVTIIKQGSNLYMGNIGDSRAILGSKDSNDSMIAVQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVSRVWLPFDNAPGLAMARAFGDFCLK--------DYGVISIPEFSHRVLTDRDQFIVLASDGVWDVLSNEEVVEVV 322          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C52_ARATH (Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.781e-11
Identity = 51/147 (34.69%), Postives = 72/147 (48.98%), Query Frame = -1
Query:  394 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFV 780
            SGST    + +   L + N GDSR +L  K       A  L+ D KPDL  E +RI +  G +       +V RV         L +ARA GD   K        +  V + P+ +   L D D+F+V+A DG+WD LS++E+VD V
Sbjct:  194 SGSTGVTILKQGSNLFMGNIGDSRAILGSKDSNDSMVATQLTVDLKPDLPREAERIKRCKGRVFAMEDEPEVPRVWLPYDDAPGLAMARAFGDFCLK--------EYGVISVPEFTHRVLTDRDQFIVLASDGVWDVLSNEEVVDIV 332          
The following BLAST results are available for this feature:
BLAST of CN188095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
P2C66_ORYSJ2.311e-1129.52Probable protein phosphatase 2C 66 OS=Oryza sativa... [more]
P2C74_ARATH3.018e-1134.01Probable protein phosphatase 2C 74 OS=Arabidopsis ... [more]
P2C61_ARATH3.018e-1134.01Probable protein phosphatase 2C 61 OS=Arabidopsis ... [more]
P2C46_ARATH3.018e-1132.32Probable protein phosphatase 2C 46 OS=Arabidopsis ... [more]
P2C38_ARATH3.941e-1135.06Probable protein phosphatase 2C 38 OS=Arabidopsis ... [more]
P2C14_ORYSJ3.941e-1126.43Probable protein phosphatase 2C 14 OS=Oryza sativa... [more]
P2C15_ORYSJ6.723e-1133.09Probable protein phosphatase 2C 15 OS=Oryza sativa... [more]
P2C01_ARATH6.723e-1133.33Probable protein phosphatase 2C 1 OS=Arabidopsis t... [more]
P2C52_ARATH8.781e-1134.69Probable protein phosphatase 2C 52 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188095 ID=CN188095; Name=CN188095; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTAGGATATCTATCCCATTAAAATGAAAAAGCTTAAATAT
TTACAACCAAATCATGAGAATCGTTTTCCGAATGTAAAATCAGGGACCAT
GGTTCTGAGCTCAGCAGTGTTTCAGACAGTAGAAAATGAGTACCATTTAG
TCAGTGCAAAGAGTGCTACAGCTAATTCGATTCAGTCCCTGCTGAACTGC
TGGCTAACTTGGATTGTTGGTCAGATGGTGGCTGCTCAGCCGCAGAAGGA
CCATTATTAGAAAGAATTTTAAACTGAACCAAGATCATGGTCATGTTGTC
GCATCCTTCACCACCAGCTGATGGAGCCAAGCACCGATCGAATACTTTCT
CGCAAATGACTGATAGTTTTGTTTCGTTGGTTAATTGATCCCTGACAAAA
TCGACAAGTTCTTGACTTGAAAGGCAATCCCAAATCCCATCACAAGCTAT
GACAAGAAACTCATCGTCATCACAAAGTTCAATAGTACTTATATCAGGAT
TGGCAGTCACAATCTGTTTTTCAGCAGGCAAACTTTTGTTTAGCTTGAAC
TCCACATCTCCAATAGCTCTCGCCAAATTTAAACTTCCATTAACACGTCC
AACTTGTATAAAACCACCAGCTTTGAGAATTCTATCTTTCTCAACCTCAA
GATCAGGCTTATGGTCTTTAGATAGATTAAGTGCCTGGCCCTTCCTCGAT
AACACACAACGAGAATCACCAGCATTTGCAACCACGAGTTGCTTGTCTCT
AATGATTGCTACGCAAGCTGTACTTCCAGAAGTTGGTCCATGAAAATCTG
AGTGAGGACCCTCCTCCGATGCCCAATCGTCAAAATGATCATT
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