CN188095

Overview
NameCN188095
Unique NameCN188095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C4_PARTE (Probable protein phosphatase 2C 4 OS=Paramecium tetraurelia GN=GSPATT00020181001 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.075e-36
Identity = 78/176 (44.32%), Postives = 114/176 (64.77%), Query Frame = -1
Query:  268 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE----TKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK 780
            +G TA VA+     L VANAGDSR VL R     ++S DHKPD   EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L + +Q++ A PDI  +EL   D+FL++ CDG+++ L  Q+L+ F+  +L N+      L  + E + D  +AP ++ G GCDNMT +++  K
Sbjct:  124 AGCTANVALFHKNVLYVANAGDSRSVLCRNNTNYDMSVDHKPDNYEEKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKRDSKLRSNEQLIIALPDIKKVELNQTDKFLLMGCDGVFETLDHQDLLKFINQKLGNQQITPQLLGRVAEDLLDNLIAPDTSAGTGCDNMTTLIIYLK 299          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C3_YEAST (Protein phosphatase 2C homolog 3 OS=Saccharomyces cerevisiae GN=PTC3 PE=1 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 6.039e-36
Identity = 85/174 (48.85%), Postives = 113/174 (64.94%), Query Frame = -1
Query:  277 SGSTACVAIIRD--KQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL-CDDDEFLVIACDGIWDCLSSQELVDFVRDQLT-NETKLSVICEKVFDRCLAPSAGGE--GCDNMTMILV 780
            SG TA V ++    K L+ AN+GDSR VLS  G +  +S DHKP L  EK RI+ A GF+++ RVNG+L L+RAIGD EFK N  L   +Q+VT  PDI    L  D+DEF+++ACDGIWDCL+SQE VD V   ++     LS I  ++ D C +P+  G   GCDNM++ +V
Sbjct:  118 SGCTATVILVSQLKKLLICANSGDSRTVLSTGGNSKAMSFDHKPTLLSEKSRIVAADGFVEMDRVNGNLALSRAIGDFEFKSNTKLGPHEQVVTCVPDIICHNLNYDEDEFVILACDGIWDCLTSQECVDLVHYGISQGNMTLSDISSRIVDVCCSPTTEGSGIGCDNMSISIV 291          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C2_PARTE (Probable protein phosphatase 2C 2 OS=Paramecium tetraurelia GN=GSPATT00030171001 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35
Identity = 81/176 (46.02%), Postives = 111/176 (63.07%), Query Frame = -1
Query:  268 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL----TNETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK 780
            +G TA VA+I    L VANAGDSR VL R     ++S DHKPD   EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L   +Q++ A PD+  +EL   D+FL++ CDG+++ L+  +L+  V   L      E  L    E + D+ LAP ++ G GCDNMT ILV  K
Sbjct:  124 AGCTANVALIYKNTLYVANAGDSRTVLCRNNANYDMSVDHKPDNPEEKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKRDSKLRVNEQLIIAIPDVKKVELGPQDKFLLLGCDGVFETLNHMDLLKQVNSTLGQAQVTEELLRKAAEDLLDQLLAPDTSQGTGCDNMTTILVYLK 299          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C1_PARTE (Protein phosphatase 2C 1 OS=Paramecium tetraurelia GN=GSPATT00029903001 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 80/176 (45.45%), Postives = 112/176 (63.64%), Query Frame = -1
Query:  268 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL----TNETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK 780
            +G TA VA+I    L VANAGDSR VL R     ++S DHKPD   EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L + +Q++ A PD+   EL   D+F+++ CDG+++ L+ QEL+  V   +      E  L    E + D+ LAP ++ G GCDNMT ILV  +
Sbjct:  124 AGCTANVALIYKNTLYVANAGDSRSVLCRNNTNHDMSVDHKPDNPEEKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKRDNKLRSNEQLIIALPDVKKTELTPQDKFILMGCDGVFETLNHQELLKQVNSTIGQAQVTEELLKKAAEDLLDQLLAPDTSQGTGCDNMTTILVYLR 299          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.112e-35
Identity = 88/199 (44.22%), Postives = 120/199 (60.30%), Query Frame = -1
Query:  268 PHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ-------VGR-----------VNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 807
            P + +  P+  GSTACV +IR  QL+V +AGDSRCVLSR GQA  LS DHKPD E E++R+  AGG          +GR             G ++++R+IGD   K N+ LP E Q++T NPDI T+++ DD EFLVIA +G+W  +++Q +VD   D+L    +  VICE++    L PS      DN T+ILV FK
Sbjct:  182 PQATYTAPSYEGSTACVVVIRGDQLIVGHAGDSRCVLSRNGQASALSVDHKPDSESERERVQNAGGVAVGYSYRKIMGRWVTKKQWGFTDFKGRVSISRSIGDFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQFGL-PSG-----DNTTVILVLFK 374          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.249e-33
Identity = 85/203 (41.87%), Postives = 120/203 (59.11%), Query Frame = -1
Query:  268 PHSDFHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-ALNLSKDHKP--DLEVEKDRILKAGGFIQ------------------VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE-TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 807
            P + + GP   GSTACV +IR  Q++V + GDSRCVLSR+G  A++LS DHKP    E E++R+  AGG                     +G   G + ++R+IGD  FK NK L  EKQ++  +PDI   ++ DD EFLVIA  G+W C+ S ++V ++ D+L+ E  +L VICE+V +  LA        +N T+ILVQFK
Sbjct:  132 PQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSFDHKPCTRTESERERVQNAGGRSLGLRCEQVMGNYVVKEQWVLGDFGGGVTISRSIGDFAFKKNKDLDREKQMLVCDPDILADDITDDMEFLVIASQGLWSCVDSADVVSYIHDRLSVEGAELRVICEEVVEFGLASG------ENTTVILVQFK 328          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.818e-32
Identity = 74/183 (40.44%), Postives = 110/183 (60.11%), Query Frame = -1
Query:  232 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQ 780
            SGSTA   ++    +   N GDSR VL R GQ    ++DHKP   VEK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I   ++DEF+V+ACDGIWD +S++EL +FV+ +L     L  +C  V D CL   +     DNM+++LV F    +N P  +E+
Sbjct:  130 SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSVVLVCF----SNAPKVSEE 304          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32
Identity = 73/183 (39.89%), Postives = 110/183 (60.11%), Query Frame = -1
Query:  232 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQ 780
            SGSTA   +I  K +   N GDSR VL R GQ    ++DHKP    EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I   ++DEF+++ACDGIWD +S++EL +FV+ +L     L  +C  V D CL   +     DNM+++LV F    +N P  +++
Sbjct:  130 SGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSIVLVCF----SNAPKVSDE 304          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.539e-31
Identity = 72/183 (39.34%), Postives = 110/183 (60.11%), Query Frame = -1
Query:  232 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQ 780
            SGSTA   +I  K +   N GDSR VL R GQ    ++DHKP    EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I   ++DEF+++ACDGIWD +S++EL ++V+ +L     L  +C  V D CL   +     DNM+++LV F    +N P  +++
Sbjct:  130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSIVLVCF----SNAPKVSDE 304          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C18_ORYSJ (Probable protein phosphatase 2C 18 OS=Oryza sativa subsp. japonica GN=Os02g0599200 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.539e-31
Identity = 88/234 (37.61%), Postives = 130/234 (55.56%), Query Frame = -1
Query:  175 FHGPT-SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-ALNLSKDHKPDL-EVEKDRILKAGGFIQ------------------VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNN------GPSAAEQPPSDQQSKLASSSAGTESN 795
            + GP   GSTACV +IR  Q++V +AGDSRCVLSR+G  A++LS DHKP   E E++R+  AGG                     +G    S+ ++R+IGD  FK NK L  E+Q++  +PDI T ++  D EFLVIA  G+W C+ S ++V ++  +L    +L VICE++    LA        +N T+ILVQFK  +         P+A +   S+  S  A  + G++S+
Sbjct:  245 YTGPAYEGSTACVVVIRGDQMIVGHAGDSRCVLSRQGGLAIDLSSDHKPRTSESERERVQNAGGISLGVDCEKVMENYVIKEQWILGYFGESVTISRSIGDFAFKQNKDLNREEQMLICDPDIHTHDITGDMEFLVIASQGLWSCMESADVVAYIHVRLLEGVELRVICEELVQSGLASG------ENTTVILVQFKPGAFQFQYELVDPAAFDTAASNVASTSAGPAGGSDSD 472          
The following BLAST results are available for this feature:
BLAST of CN188095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
PP2C4_PARTE2.075e-3644.32Probable protein phosphatase 2C 4 OS=Paramecium te... [more]
PP2C3_YEAST6.039e-3648.85Protein phosphatase 2C homolog 3 OS=Saccharomyces ... [more]
PP2C2_PARTE2.997e-3546.02Probable protein phosphatase 2C 2 OS=Paramecium te... [more]
PP2C1_PARTE5.112e-3545.45Protein phosphatase 2C 1 OS=Paramecium tetraurelia... [more]
P2C20_ORYSJ5.112e-3544.22Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
P2C16_ORYSJ6.249e-3341.87Probable protein phosphatase 2C 16 OS=Oryza sativa... [more]
PPM1B_MOUSE1.818e-3240.44Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
PPM1B_BOVIN6.909e-3239.89Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
PPM1B_HUMAN1.539e-3139.34Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
P2C18_ORYSJ1.539e-3137.61Probable protein phosphatase 2C 18 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188095 ID=CN188095; Name=CN188095; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTAGGATATCTATCCCATTAAAATGAAAAAGCTTAAATAT
TTACAACCAAATCATGAGAATCGTTTTCCGAATGTAAAATCAGGGACCAT
GGTTCTGAGCTCAGCAGTGTTTCAGACAGTAGAAAATGAGTACCATTTAG
TCAGTGCAAAGAGTGCTACAGCTAATTCGATTCAGTCCCTGCTGAACTGC
TGGCTAACTTGGATTGTTGGTCAGATGGTGGCTGCTCAGCCGCAGAAGGA
CCATTATTAGAAAGAATTTTAAACTGAACCAAGATCATGGTCATGTTGTC
GCATCCTTCACCACCAGCTGATGGAGCCAAGCACCGATCGAATACTTTCT
CGCAAATGACTGATAGTTTTGTTTCGTTGGTTAATTGATCCCTGACAAAA
TCGACAAGTTCTTGACTTGAAAGGCAATCCCAAATCCCATCACAAGCTAT
GACAAGAAACTCATCGTCATCACAAAGTTCAATAGTACTTATATCAGGAT
TGGCAGTCACAATCTGTTTTTCAGCAGGCAAACTTTTGTTTAGCTTGAAC
TCCACATCTCCAATAGCTCTCGCCAAATTTAAACTTCCATTAACACGTCC
AACTTGTATAAAACCACCAGCTTTGAGAATTCTATCTTTCTCAACCTCAA
GATCAGGCTTATGGTCTTTAGATAGATTAAGTGCCTGGCCCTTCCTCGAT
AACACACAACGAGAATCACCAGCATTTGCAACCACGAGTTGCTTGTCTCT
AATGATTGCTACGCAAGCTGTACTTCCAGAAGTTGGTCCATGAAAATCTG
AGTGAGGACCCTCCTCCGATGCCCAATCGTCAAAATGATCATT
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