CN188095

Overview
NameCN188095
Unique NameCN188095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.338e-29
Identity = 67/171 (39.18%), Postives = 101/171 (59.06%), Query Frame = -1
Query:  271 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 783
            +SG+TA  A+I  + L+VANAGD R VLSR+G A+ +SKDH+     E+ RI   GG++  G +NG L + RA+GD   +  K +      ++A P++  I L  +DEFL+I  DGIWD  S+Q  VDF R +L     L + C+++ +  +   A     DN+T ++V F
Sbjct:  153 SSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYVDDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQNAVDFTRKRLQEHNDLRLCCKQIVEEAIRRGAS----DNLTAVMVSF 319          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.338e-29
Identity = 70/171 (40.94%), Postives = 101/171 (59.06%), Query Frame = -1
Query:  271 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 783
            +SG+TA  A I  ++L++ANAGD R VL R+G+A+ LSKDHKP+   EK RI K GG +  G +NG L++ARAIGD   K  K        ++  P++   +L +DDEFL++ CDG+WD +SSQ  V   R +L           ++    L  +     CDN+T+I+V F
Sbjct:  181 SSGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVVYDGYLNGQLSVARAIGDWHMKGPKGSACP---LSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQCAVTIARKELMIHNDPERCSRELVREALKRNT----CDNLTVIVVCF 344          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.220e-28
Identity = 72/170 (42.35%), Postives = 105/170 (61.76%), Query Frame = -1
Query:  277 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGD--VEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILV 780
            SG+TA  AI+  + LVVANAGD R VLSR+G+A+ +S+DHKP    E+ RI  +GG +  G +NG LN+ARA+GD  +E    K   ++   + A P++ T +L ++DEFL+I CDG+WD   SQ  VDF R +L  E    V+C K     +  +   +  DN+T ++V
Sbjct:  189 SGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVFDGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAVDFARRRL-QEHNDPVMCSK---ELVEEALKRKSADNVTAVVV 354          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.593e-28
Identity = 65/173 (37.57%), Postives = 102/173 (58.96%), Query Frame = -1
Query:  271 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 789
            G   GSTA   ++  + L +A+ GDSR +LSR G     ++DH+P    E++RI  AGG ++  RV GSL ++RA+GD  +K     P E Q+V+A P+++ +   D+DEF+++A DG+WD LS  +L   V  +L     L ++C ++ D CL   +     DNMT ++V F
Sbjct:  151 GDPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRPRERERIHDAGGTVRRRRVEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAALARQDEDEFVLLASDGVWDALSGADLAGLVTSRLRLGLDLELLCAQLLDTCLCKGS----LDNMTCMVVCF 319          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.053e-28
Identity = 67/173 (38.73%), Postives = 99/173 (57.23%), Query Frame = -1
Query:  265 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKI 783
            +SG+TA  A+I  + L++ANAGD R VLSR G A+ +S DH+P    EK R+   GG++  G +NG L + RA+GD   +  K        ++A P++  I L  DDEFL+I  DGIWD  S+Q +VDF R +L     +   C ++ +  +   A     DN+T +LV F +
Sbjct:  159 SSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYVDDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNVVDFARRRLQEHNDVKSCCREIVEEAIKRGA----TDNLTAVLVSFHL 327          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PP2C4_YEAST (Protein phosphatase 2C homolog 4 OS=Saccharomyces cerevisiae GN=PTC4 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.923e-27
Identity = 80/203 (39.41%), Postives = 109/203 (53.69%), Query Frame = -1
Query:  277 EEGPHSDFHGPTSGSTACVA-IIRDKQLVVANAGDSRCVLSRKGQALN-LSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFK------------------LNKSLPAEKQIVTANPDISTIEL-CDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAP--SAGGEGCDNMTMILV 816
            +E  +  F   + GSTA VA II ++ L VAN GDSRC+LS K   +  +S DHKP    E  RI   GG + +GRV G L L+RA  D +FK                  L    P ++  VT  PD+   ++    DEFLV+ACDGIWD  ++++L+ F++  L + TKL  I  K+ D  +A   S  G G DNMT I+V
Sbjct:  164 DEELYRHFANSSCGSTAVVACIINEESLYVANCGDSRCILSSKSNGIKTMSFDHKPQHIGELIRINDNGGTVSLGRVGGVLALSRAFSDFQFKRGVTYPHRRTKLTNITQNLTYGTPPQEAQVTVEPDVLMHKIDYSKDEFLVLACDGIWDIYNNKQLIHFIKYHLVSGTKLDTIITKLLDHGIAQANSNTGVGFDNMTAIIV 366          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C19_ORYSJ (Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 8.740e-27
Identity = 74/170 (43.53%), Postives = 94/170 (55.29%), Query Frame = -1
Query:  268 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 777
            GSTACV +IR  QL+V +AGDSRCVLSR GQA  LS DHKPD                               D   K N+ LP E Q++T NPDI T+++ DD EFLVIA +G+W  +++Q +VD   D+L    +  VICE++    L PS      DN T+ILV FK
Sbjct:  385 GSTACVVVIRGNQLIVGHAGDSRCVLSRNGQASALSVDHKPDR------------------------------DFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQFGL-PSG-----DNTTVILVLFK 518          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.947e-26
Identity = 66/171 (38.60%), Postives = 99/171 (57.89%), Query Frame = -1
Query:  271 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 783
            T G TA V ++  + L +A+ GDSR VLSR G     ++DH+P    E++RI  AGG I+  RV GSL ++RA+GD  +K     P E Q+V+A P+++ +    +DEF+++A DG+WD +S   L   V  +L       ++C ++ D CL   +     DNMT ILV F
Sbjct:  160 TGGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIRRRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRLRLGLAPELLCAQLLDTCLCKGS----LDNMTCILVCF 326          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.321e-26
Identity = 74/183 (40.44%), Postives = 108/183 (59.02%), Query Frame = -1
Query:  229 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQP 777
            G+TA  A+I  + L+VANAGD R VL R+G A+++S DH+   E E+ RI   GG+ + G +NG L + RAIGD E K N    +   ++ ++P+I  I L +DDEFL++ACDGIWD LSSQ  V  VR  L           ++       +A  +  DNMT+I++ F    ++ PS+ +QP
Sbjct:  187 GTTALTALIIGRHLLVANAGDCRAVLCRRGVAVDMSFDHRSTYEPERRRIEDLGGYFEDGYLNGVLAVTRAIGDWELK-NPFTDSSSPLI-SDPEIGQIILTEDDEFLILACDGIWDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKE----AARLQSSDNMTVIVICF----SSVPSSPKQP 359          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.338e-26
Identity = 71/170 (41.76%), Postives = 101/170 (59.41%), Query Frame = -1
Query:  271 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI-QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 777
            G+TA  A+I  + L+VANAGD R VL RKG+A+++S+DHKP   +E+ R+ ++GGFI   G +N  L + RA+GD + KL       +  + + P+I  I L +DDEFLVI CDGIWD L+SQE V  VR  L      +    ++    L    G    DN+T ++V F
Sbjct:  187 GTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDGYLNEVLAVTRALGDWDLKLPH---GSQSPLISEPEIKQITLTEDDEFLVIGCDGIWDVLTSQEAVSIVRRGLNRHNDPTRCARELVMEAL----GRNSFDNLTAVVVCF 349          
The following BLAST results are available for this feature:
BLAST of CN188095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
P2C27_ORYSJ9.338e-2939.18Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C27_ARATH9.338e-2940.94Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C22_ARATH1.220e-2842.35Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
PPMBL_MOUSE1.593e-2837.57Probable protein phosphatase 1B-like OS=Mus muscul... [more]
P2C54_ORYSJ6.053e-2838.73Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
PP2C4_YEAST3.923e-2739.41Protein phosphatase 2C homolog 4 OS=Saccharomyces ... [more]
P2C19_ORYSJ8.740e-2743.53Probable protein phosphatase 2C 19 OS=Oryza sativa... [more]
PPMBL_HUMAN1.947e-2638.60Probable protein phosphatase 1B-like OS=Homo sapie... [more]
P2C13_ARATH3.321e-2640.44Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
P2C49_ARATH4.338e-2641.76Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188095 ID=CN188095; Name=CN188095; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTAGGATATCTATCCCATTAAAATGAAAAAGCTTAAATAT
TTACAACCAAATCATGAGAATCGTTTTCCGAATGTAAAATCAGGGACCAT
GGTTCTGAGCTCAGCAGTGTTTCAGACAGTAGAAAATGAGTACCATTTAG
TCAGTGCAAAGAGTGCTACAGCTAATTCGATTCAGTCCCTGCTGAACTGC
TGGCTAACTTGGATTGTTGGTCAGATGGTGGCTGCTCAGCCGCAGAAGGA
CCATTATTAGAAAGAATTTTAAACTGAACCAAGATCATGGTCATGTTGTC
GCATCCTTCACCACCAGCTGATGGAGCCAAGCACCGATCGAATACTTTCT
CGCAAATGACTGATAGTTTTGTTTCGTTGGTTAATTGATCCCTGACAAAA
TCGACAAGTTCTTGACTTGAAAGGCAATCCCAAATCCCATCACAAGCTAT
GACAAGAAACTCATCGTCATCACAAAGTTCAATAGTACTTATATCAGGAT
TGGCAGTCACAATCTGTTTTTCAGCAGGCAAACTTTTGTTTAGCTTGAAC
TCCACATCTCCAATAGCTCTCGCCAAATTTAAACTTCCATTAACACGTCC
AACTTGTATAAAACCACCAGCTTTGAGAATTCTATCTTTCTCAACCTCAA
GATCAGGCTTATGGTCTTTAGATAGATTAAGTGCCTGGCCCTTCCTCGAT
AACACACAACGAGAATCACCAGCATTTGCAACCACGAGTTGCTTGTCTCT
AATGATTGCTACGCAAGCTGTACTTCCAGAAGTTGGTCCATGAAAATCTG
AGTGAGGACCCTCCTCCGATGCCCAATCGTCAAAATGATCATT
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