CN188095

Overview
NameCN188095
Unique NameCN188095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.153e-25
Identity = 68/184 (36.96%), Postives = 106/184 (57.61%), Query Frame = -1
Query:  232 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQ 783
            +SG+TA  A++  +QL+VANAGD R VL R+G A+ +S+DH+ +   E +R+  +GG+I+ G +NG L++ RA+GD + K+     +    + A P+     L +DDEFL++ CDGIWD ++SQ  V  VR  L          E+     +  +   E  DN+T+I+V F  +S  G    EQ
Sbjct:  183 SSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERVAASGGYIEDGYLNGVLSVTRALGDWDMKMPDGSISP---LIAEPEFRQTMLTEDDEFLIMGCDGIWDVMTSQHAVSIVRRGLRQHDD----PERCARELVMEAKRLETADNLTVIVVCF--VSELGSPRQEQ 357          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.796e-25
Identity = 75/197 (38.07%), Postives = 108/197 (54.82%), Query Frame = -1
Query:  211 HGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQS 792
            H   +GSTA  AI+   +L+VAN GDSR V+ R G A+ +S+DHKPD   E+ RI  AGGF+      RV G L ++RA GD      K L   KQ V A+P+I    +    EFL++A DG+WD +S++E VD VR     E     + ++ + R  A        DN+T+++V+F   +  G   + +  SDQ S
Sbjct:  169 HTRDAGSTASTAILVGDRLLVANVGDSRAVVCRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------KLL---KQYVVADPEIKEEIVDSSLEFLILASDGLWDVVSNKEAVDMVRPIQDPEQAAKRLLQEAYQRGSA--------DNITVVIVRFLEGTTTGGGPSREAASDQNS 348          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.068e-24
Identity = 73/193 (37.82%), Postives = 106/193 (54.92%), Query Frame = -1
Query:  232 HGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF---KILSNNGPSAAEQ 792
            H   +GSTA  AI+   +L+VAN GDSR V+ R G A  +S+DHKPD   E++RI  AGGF+      RV G L ++RA GD            KQ V A+P+I   ++ D  EFL++A DG+WD  S++E V  V++    E     +  +   R  A        DN+T ++V+F   K  +NNG S++E+
Sbjct:  120 HTRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAFAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGD---------RLLKQYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEEAVAVVKEVEDPEESTKKLVGEAIKRGSA--------DNITCVVVRFLESKSANNNGSSSSEE 295          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.822e-24
Identity = 77/217 (35.48%), Postives = 112/217 (51.61%), Query Frame = -1
Query:  226 DHFDDWASEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF---------KILSNNGPSAAEQPP 840
            D ++   SE     + H   +GSTA  AI+   +LVVAN GDSR V+SR G+A+ +S+DHKPD   E++RI  AGGF+      RV G L ++RA GD            KQ V A+P+I   ++ D  EFL++A DG+WD  S++  V  V++    E     +  +   R  A        DN+T ++V+F          I S++   A E PP
Sbjct:  104 DAYNHTDSELLKSENSHNRDAGSTASTAILVGDRLVVANVGDSRAVISRGGKAIAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGD---------RLLKQYVVADPEIQEEKIDDTLEFLILASDGLWDVFSNEAAVAMVKEVEDPEDSAKKLVGEAIKRGSA--------DNITCVVVRFLEKKSASSSHISSSSSKEAKEMPP 303          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.109e-24
Identity = 75/197 (38.07%), Postives = 109/197 (55.33%), Query Frame = -1
Query:  211 HGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQS 792
            H   +GSTA  AI+   +L+VAN GDSR V+ R G A+ +S+DHKPD   E+ RI  AGGF+      RV G L ++RA GD      K L   KQ V A+P+I    +    EFL++A DG+WD ++++E V  V+  L +E     + ++   R  A        DN+T ++V+F    N+ P   E+P +DQ S
Sbjct:  151 HNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------KLL---KQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVKPILDSEQAAKKLLQEASQRGSA--------DNITCLVVRFLEQENHLP---ERPTNDQAS 327          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.045e-24
Identity = 77/204 (37.75%), Postives = 111/204 (54.41%), Query Frame = -1
Query:  217 SEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQ 819
            SE   H D      GSTA  A++    L VAN GDSR V+S+ G+A+ LS+DHKP+   E+ RI  AGG +      RV G L ++RA G      N+ L   KQ V A+P+I   E+ D+ EFL++A DG+WD + +++ V  V+ +   E     + E  F R       G G DN+T I+V+F+    +G S+   P SD+
Sbjct:  312 SESHTHRD-----DGSTASTAVLVGNHLYVANVGDSRAVISKAGKAIALSEDHKPNRSDERKRIESAGGVVMWAGTWRVGGVLAMSRAFG------NRLL---KQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNEDAVSLVKIEEEPEAAARKLTETAFSR-------GSG-DNITCIVVKFQHDKMDGDSS---PTSDK 490          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C22_ORYSJ (Putative protein phosphatase 2C 22 OS=Oryza sativa subsp. japonica GN=Os02g0607500 PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.015e-23
Identity = 87/254 (34.25%), Postives = 114/254 (44.88%), Query Frame = -1
Query:  268 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGR--------------------VNGSLNLARAI---------GDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIW----------------DCLSSQELVDFVRDQLTN---------------------------------------ETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 777
            GSTACV IIR  Q+ V N GDSRCVLS+ GQA++LS DHKP++ +E+ RIL+ GG  QV R                    + G L+ +RA+         GD  +K N     + Q+VT  PDI   ++  D EFLVIA DGI                 D +SSQ++VDFV ++L +                                       E  L   CEK+ + CL      E  +N T ILVQFK
Sbjct:  235 GSTACVVIIRGNQITVGNVGDSRCVLSKNGQAIDLSTDHKPNVPLERQRILRVGG--QVWREKFPAKDSGGEIREQWGPYCIEGKLSTSRALAGIFLTTISGDFAYK-NIVYRPQYQMVTHFPDIRVAKITGDTEFLVIASDGICSIQILIVDLNTFFPFRDHMSSQDVVDFVHEKLNSRRQELCQSLINQGKKRECFTEDSQLATNKNIAPNTTTLGEETLHTTCEKLVENCL------ESRNNATAILVQFK 479          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.437e-23
Identity = 72/175 (41.14%), Postives = 100/175 (57.14%), Query Frame = -1
Query:  265 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKI 780
            +GSTA  A +   +L+VAN GDSR V SR G A+ LS DHKPD   E+ RI  AGGFI      RV G L ++RA GD + K    + AE +I     DIST+      EF+V+A DG+W+ LS+++ V  VRD    ET    + ++ + R          CDN+T I+V+F++
Sbjct:  214 AGSTAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWAGTWRVGGILAVSRAFGDKQLK--PYVIAEPEI--QEEDISTL------EFIVVASDGLWNVLSNKDAVAIVRDISDAETAARKLVQEGYAR--------GSCDNITCIVVRFEV 370          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23
Identity = 54/132 (40.91%), Postives = 81/132 (61.36%), Query Frame = -1
Query:  382 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL 777
            G+TA  A++  + L+VAN GD R VL RKG+A+++S DHK   E E+ R+   GG+ +   + G L + RA+GD   K    L      + ++PDI  + L ++DEFL++ CDG+WD ++SQ  V FVR  L
Sbjct:  229 GTTALTALVIGRHLMVANVGDCRAVLCRKGKAVDMSFDHKSTFEPERRRVEDLGGYFEGEYLYGDLAVTRALGDWSIKRFSPLGESLSPLISDPDIQQMILTEEDEFLIMGCDGVWDVMTSQYAVTFVRQGL 360          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C57_ARATH (Protein phosphatase 2C 57 OS=Arabidopsis thaliana GN=PPH1 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.800e-22
Identity = 65/185 (35.14%), Postives = 93/185 (50.27%), Query Frame = -1
Query:  343 WASEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKP-----DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQI-------------------VTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKV 825
            W    G   D     SGSTA V IIR+    +A+ GDS  VLSR GQ   L+  H+P         E  R+ +AGG+I  GR+ G + ++RA GD+ FK  K+   +K +                   V A PDI  + L  D EF+++A DG+WD + S ++V +VRDQL     + + CE +
Sbjct:  148 WLEANGDEED----ESGSTATVMIIRNDVSFIAHIGDSCAVLSRSGQIEELTDYHRPYGSSRAAIQEVKRVKEAGGWIVNGRICGDIAVSRAFGDIRFKTKKNDMLKKGVDEGRWSEKFVSRIEFKGDMVVATPDIFQVPLTSDVEFIILASDGLWDYMKSSDVVSYVRDQLRKHGNVQLACESL 328          
The following BLAST results are available for this feature:
BLAST of CN188095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
P2C47_ORYSJ2.153e-2536.96Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
P2C10_ORYSJ4.796e-2538.07Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C71_ARATH1.068e-2437.82Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C69_ARATH1.822e-2435.48Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C59_ORYSJ3.109e-2438.07Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C52_ORYSJ9.045e-2437.75Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C22_ORYSJ2.015e-2334.25Putative protein phosphatase 2C 22 OS=Oryza sativa... [more]
P2C11_ARATH3.437e-2341.14Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C43_ARATH7.657e-2340.91Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
P2C57_ARATH3.800e-2235.14Protein phosphatase 2C 57 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188095 ID=CN188095; Name=CN188095; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTAGGATATCTATCCCATTAAAATGAAAAAGCTTAAATAT
TTACAACCAAATCATGAGAATCGTTTTCCGAATGTAAAATCAGGGACCAT
GGTTCTGAGCTCAGCAGTGTTTCAGACAGTAGAAAATGAGTACCATTTAG
TCAGTGCAAAGAGTGCTACAGCTAATTCGATTCAGTCCCTGCTGAACTGC
TGGCTAACTTGGATTGTTGGTCAGATGGTGGCTGCTCAGCCGCAGAAGGA
CCATTATTAGAAAGAATTTTAAACTGAACCAAGATCATGGTCATGTTGTC
GCATCCTTCACCACCAGCTGATGGAGCCAAGCACCGATCGAATACTTTCT
CGCAAATGACTGATAGTTTTGTTTCGTTGGTTAATTGATCCCTGACAAAA
TCGACAAGTTCTTGACTTGAAAGGCAATCCCAAATCCCATCACAAGCTAT
GACAAGAAACTCATCGTCATCACAAAGTTCAATAGTACTTATATCAGGAT
TGGCAGTCACAATCTGTTTTTCAGCAGGCAAACTTTTGTTTAGCTTGAAC
TCCACATCTCCAATAGCTCTCGCCAAATTTAAACTTCCATTAACACGTCC
AACTTGTATAAAACCACCAGCTTTGAGAATTCTATCTTTCTCAACCTCAA
GATCAGGCTTATGGTCTTTAGATAGATTAAGTGCCTGGCCCTTCCTCGAT
AACACACAACGAGAATCACCAGCATTTGCAACCACGAGTTGCTTGTCTCT
AATGATTGCTACGCAAGCTGTACTTCCAGAAGTTGGTCCATGAAAATCTG
AGTGAGGACCCTCCTCCGATGCCCAATCGTCAAAATGATCATT
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