CN188095

Overview
NameCN188095
Unique NameCN188095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.482e-22
Identity = 67/180 (37.22%), Postives = 96/180 (53.33%), Query Frame = -1
Query:  271 SDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 801
            SD      GSTA  A++   +L VAN GDSR ++ R G A+ +SKDHKPD   E+ RI  AGGF+      RV G L ++RA GD      K L   KQ V  +P+I    +    EFL++A DG+WD ++++E VD  R     E     + ++ + R        E  DN+T ++V+F
Sbjct:  110 SDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------KLL---KQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLLQEAYKR--------ESSDNITCVVVRF 272          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.482e-22
Identity = 67/172 (38.95%), Postives = 95/172 (55.23%), Query Frame = -1
Query:  271 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 777
            GSTA  AI     + VAN GDSR V+S+ G+A+ LS DHKP+ + E+ RI  AGG +      RV G L ++RA G      N+ L   K+ V A P++   E+ DD EFL++A DG+WD +S++  V FV+ +   E     + E  F R           DN+T I+V+F
Sbjct:  207 GSTASTAIFVGNHIYVANVGDSRTVMSKAGKAIALSSDHKPNRKDERKRIENAGGVVTWSGTWRVGGVLAMSRAFG------NRFL---KRFVVAEPEVQEQEIDDDLEFLILASDGLWDVVSNEHAVAFVKAEEGPEAAARKLAEIAFAR--------GSTDNITCIVVKF 361          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1L_BOVIN (Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.106e-21
Identity = 66/178 (37.08%), Postives = 100/178 (56.18%), Query Frame = -1
Query:  268 SGSTACVAIIRDKQLVVANAGDSRCVLSRK-GQALNLSKDHKPDLEVEKDRILKAGGFIQVG---RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNE--TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 780
            +G+T  +A++ DK L VAN GDSR VL  K G A+ LS DHKP    E+ RI +AGGFI      RV G L ++R++GD   K          +V  +PDI T +L     EF+++A DG+WD  S++E V F++D+L        S++ +  +  C          DN+T+++V+F+
Sbjct:  191 AGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLK-------NLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKDRLDEPHFGAKSIVLQSFYRGC---------PDNITVMVVKFR 352          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.106e-21
Identity = 71/187 (37.97%), Postives = 102/187 (54.55%), Query Frame = -1
Query:  256 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAG-------GEGC-DNMTMILVQFKILSN 783
            T GSTA VA++  +++VVAN GDSR VLSR G AL LS DHKPD   E +R+  AGG +      RV G L  +R+IGD            K  V+A P++  +E  D DEFL++A DG+WD +S++      R+ L N    S+  E V     A +A          G  DN+++++V+ + L +
Sbjct:  202 TVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGDYYL---------KPFVSAEPEVRVVERTDKDEFLILASDGLWDVVSNEVACKIARNCL-NGRAASMFPESVSGSSAADAAALLAELAVSRGSRDNISVVVVELRRLKS 378          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1L_MOUSE (Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 65/178 (36.52%), Postives = 100/178 (56.18%), Query Frame = -1
Query:  268 SGSTACVAIIRDKQLVVANAGDSRCVLSRK-GQALNLSKDHKPDLEVEKDRILKAGGFIQVG---RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNE--TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 780
            +G+T  +A++ DK L VAN GDSR VL  K G A+ LS DHKP    E+ RI +AGGFI      RV G L ++R++GD   K          +V  +PDI T +L     EF+++A DG+WD  S++E V F++++L        S++ +  +  C          DN+T+++V+F+
Sbjct:  191 AGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLK-------NLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKERLDEPHFGAKSIVLQSFYRGC---------PDNITVMVVKFR 352          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1L_HUMAN (Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 65/178 (36.52%), Postives = 100/178 (56.18%), Query Frame = -1
Query:  268 SGSTACVAIIRDKQLVVANAGDSRCVLSRK-GQALNLSKDHKPDLEVEKDRILKAGGFIQVG---RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNE--TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 780
            +G+T  +A++ DK L VAN GDSR VL  K G A+ LS DHKP    E+ RI +AGGFI      RV G L ++R++GD   K          +V  +PDI T +L     EF+++A DG+WD  S++E V F++++L        S++ +  +  C          DN+T+++V+F+
Sbjct:  191 AGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLK-------NLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKERLDEPHFGAKSIVLQSFYRGC---------PDNITVMVVKFR 352          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 66/194 (34.02%), Postives = 100/194 (51.55%), Query Frame = -1
Query:  205 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQPPSDQQSKL 777
            GSTA  A++    L VAN GDSR ++S+ G+A+ LS DHKP+   E+ RI  AGG I      RV G L ++RA G      N+ L   KQ V A P+I  +E+  + E LV+A DG+WD + +++ V   + +   E     + +  F R  A        DN+T I+V+F+      P       ++ + +L
Sbjct:  193 GSTASAAVLVGNHLYVANVGDSRTIVSKAGKAIALSDDHKPNRSDERKRIESAGGVIMWAGTWRVGGVLAMSRAFG------NRML---KQFVVAEPEIQDLEIDHEAELLVLASDGLWDVVPNEDAVALAQSEEEPEAAARKLTDTAFSRGSA--------DNITCIVVKFRHDKTESPKIETNAMAESEPEL 369          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.201e-21
Identity = 56/132 (42.42%), Postives = 82/132 (62.12%), Query Frame = -1
Query:  391 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVR 777
            GSTA V++I  ++++VAN GDSR VL R G+A+ LS DHKPD   E DRI +AGG   +    RV G L ++RAIGD            K  VT+ P+++  +  ++DEFL++A DG+WD ++++     VR
Sbjct:  233 GSTAVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRIQEAGGRVIYWDGARVLGVLAMSRAIGDNYL---------KPYVTSEPEVTVTDRTEEDEFLILATDGLWDVVTNEAACTMVR 355          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.201e-21
Identity = 65/175 (37.14%), Postives = 99/175 (56.57%), Query Frame = -1
Query:  274 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI----QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVR---DQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQ 777
            GS    A+I D  LVVANAGD R VLS  G A  L+ DH+P  + E++RI  +GG++     V R+ GSL ++R IGD            KQ + + P+I+ + +    EFL++A DG+WD +S+QE VD  R        + K  + C+K+ D  L+ S G    D+++++L+Q
Sbjct:  214 GSCCVTALISDGNLVVANAGDCRAVLSVGGFAEALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHL---------KQWIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDIARPFCKGTDQKRKPLLACKKLVD--LSVSRG--SLDDISVMLIQ 375          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.487e-21
Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = -1
Query:  271 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 780
            +GSTA  AI+   +L+VAN GDSR V+ R G A+ +S+DHKPD   E+ RI  AGGF+      RV G L ++RA GD            KQ V A+P+I   ++    EFL++A DG+WD +S++E V  ++     E     +  + + R  A        DN+T ++V+F
Sbjct:  124 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD---------RLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMIKAIEDPEEGAKRLMMEAYQRGSA--------DNITCVVVRF 279          
The following BLAST results are available for this feature:
BLAST of CN188095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
P2C45_ORYSJ6.482e-2237.22Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C07_ORYSJ6.482e-2238.95Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
PPM1L_BOVIN1.106e-2137.08Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2... [more]
P2C51_ORYSJ1.106e-2137.97Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]
PPM1L_MOUSE3.217e-2136.52Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE... [more]
PPM1L_HUMAN3.217e-2136.52Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE... [more]
P2C76_ARATH3.217e-2134.02Probable protein phosphatase 2C 76 OS=Arabidopsis ... [more]
P2C03_ARATH4.201e-2142.42Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
P2C02_ARATH4.201e-2137.14Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
P2C59_ARATH5.487e-2136.99Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188095 ID=CN188095; Name=CN188095; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTAGGATATCTATCCCATTAAAATGAAAAAGCTTAAATAT
TTACAACCAAATCATGAGAATCGTTTTCCGAATGTAAAATCAGGGACCAT
GGTTCTGAGCTCAGCAGTGTTTCAGACAGTAGAAAATGAGTACCATTTAG
TCAGTGCAAAGAGTGCTACAGCTAATTCGATTCAGTCCCTGCTGAACTGC
TGGCTAACTTGGATTGTTGGTCAGATGGTGGCTGCTCAGCCGCAGAAGGA
CCATTATTAGAAAGAATTTTAAACTGAACCAAGATCATGGTCATGTTGTC
GCATCCTTCACCACCAGCTGATGGAGCCAAGCACCGATCGAATACTTTCT
CGCAAATGACTGATAGTTTTGTTTCGTTGGTTAATTGATCCCTGACAAAA
TCGACAAGTTCTTGACTTGAAAGGCAATCCCAAATCCCATCACAAGCTAT
GACAAGAAACTCATCGTCATCACAAAGTTCAATAGTACTTATATCAGGAT
TGGCAGTCACAATCTGTTTTTCAGCAGGCAAACTTTTGTTTAGCTTGAAC
TCCACATCTCCAATAGCTCTCGCCAAATTTAAACTTCCATTAACACGTCC
AACTTGTATAAAACCACCAGCTTTGAGAATTCTATCTTTCTCAACCTCAA
GATCAGGCTTATGGTCTTTAGATAGATTAAGTGCCTGGCCCTTCCTCGAT
AACACACAACGAGAATCACCAGCATTTGCAACCACGAGTTGCTTGTCTCT
AATGATTGCTACGCAAGCTGTACTTCCAGAAGTTGGTCCATGAAAATCTG
AGTGAGGACCCTCCTCCGATGCCCAATCGTCAAAATGATCATT
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