CN188095

Overview
NameCN188095
Unique NameCN188095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.487e-21
Identity = 59/133 (44.36%), Postives = 81/133 (60.90%), Query Frame = -1
Query:  391 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVR 780
            +GSTA VA++   Q+VVANAGDSR V+SR G  + LS DHKPD   E +RI  AGG   +    RV G L ++RAIGD            K  VT+ P+++  E  DDDE L++A DG+WD ++++   + VR
Sbjct:  212 AGSTAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDGYL---------KPYVTSEPEVTVTERTDDDECLILASDGLWDVVTNEMACEVVR 335          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20
Identity = 63/181 (34.81%), Postives = 99/181 (54.70%), Query Frame = -1
Query:  259 SGSTACV-AIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI----QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLS--VICEKVFDRCLAPSAGGEGCDNMTMILVQFKILS 780
            SG   CV A+++   LVV+NAGD R VLSR G+A  L+ DH+   E E++RI   GGF+       RV GSL ++R IGD            KQ V ++PD +T+ +    EFL++A DG+WD + +QE VD  R    +  K S    C ++ +  +   +     D+++++++Q +  S
Sbjct:  223 SGGACCVTALLQKGGLVVSNAGDCRAVLSRAGKAEALTSDHRASREDERERIENLGGFVVNYRGTWRVQGSLAVSRGIGDAHL---------KQWVVSDPDTTTLGVDSQCEFLILASDGLWDKVENQEAVDIARPLYISNDKASRMTACRRLVETAVTRGS----TDDISIVIIQLQQFS 390          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1E_HUMAN (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 66/171 (38.60%), Postives = 93/171 (54.39%), Query Frame = -1
Query:  277 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL-TNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILV 777
            G+T  V  IR   L VA  GDS+ +L RKGQA+ L K HKPD E EK RI   GG I      RVNGSL+++RAIGD E          K  +  + D ++  L   +++L++ACDG +D ++  E V  V D L  N    S++  K+    +A +      DN+T+I+V
Sbjct:  340 GTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCIVWFGAWRVNGSLSVSRAIGDAE---------HKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKL----VASARDAGSSDNITVIVV 497          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 63/144 (43.75%), Postives = 79/144 (54.86%), Query Frame = -1
Query:  358 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV---GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSV 780
            SGSTA  A++    ++VAN GDSR VL R G A+ LS DHKPD   E+ RI  AGG + V    RV G L  +RAIGD            K +V   P+++ +     DE LV+A DG+WD LSSQ   D  R  L  ET  S+
Sbjct:  230 SGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIPLSNDHKPDRPDERARIEAAGGRVLVVDGARVEGILATSRAIGDRYL---------KPMVAWEPEVTFMRRESGDECLVLASDGLWDVLSSQLACDIARFCLREETPSSL 364          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 69/195 (35.38%), Postives = 104/195 (53.33%), Query Frame = -1
Query:  235 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKL----SVICEKVFDRC-----LAPSAGGEGCDNMTMILVQFKILSNNGPSAAE 783
            T GSTA VA++  +++VVAN GDSR VLSR G A+ LS DHKPD   E +R+  AGG +      R+ G L  +R+IGD            K  V A P+++ ++  D DEFL++A DG+WD +S+       R+ L+         SV      D       LA S G +  DN+++++V+ + L +   ++ E
Sbjct:  217 TVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEMERVEAAGGRVINWNGYRILGVLATSRSIGDYYL---------KPYVIAEPEVTVMDRTDKDEFLILASDGLWDVVSNDVACKIARNCLSGRAASKYPESVSGSTAADAAALLVELAISRGSK--DNISVVVVELRRLRSRTTASKE 400          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 71/178 (39.89%), Postives = 101/178 (56.74%), Query Frame = -1
Query:  271 TSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGR--VNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 783
            TSG+TA VA++RD  +LVVA+ GDSR +L RKG+ + L+ DH P+ + EK+RI K GGF+    +G+  VNG L + R+IGD++ K +         V A P+   I+L   DD FLV+  DGI   ++SQE+ DFV            + E+      A   G E  DN T ++V F
Sbjct:  185 TSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG--------VIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQ------AIQYGTE--DNSTAVVVPF 346          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1E_RAT (Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm1e PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 65/171 (38.01%), Postives = 93/171 (54.39%), Query Frame = -1
Query:  277 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL-TNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILV 777
            G+T  V  IR   L VA  GDS+ +L RKGQA+ L K HKPD E EK RI   GG   +    RVNGSL+++RAIGD E          K  +  + D ++  L   +++L++ACDG +D ++  E V  V D L  N    S++  K+    +A +      DN+T+I+V
Sbjct:  326 GTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAE---------HKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKL----VASARDAGSSDNITVIVV 483          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1E_MOUSE (Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 65/171 (38.01%), Postives = 93/171 (54.39%), Query Frame = -1
Query:  277 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL-TNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILV 777
            G+T  V  IR   L VA  GDS+ +L RKGQA+ L K HKPD E EK RI   GG   +    RVNGSL+++RAIGD E          K  +  + D ++  L   +++L++ACDG +D ++  E V  V D L  N    S++  K+    +A +      DN+T+I+V
Sbjct:  326 GTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAE---------HKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKL----VASARDAGSSDNITVIVV 483          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: PPM1K_MOUSE (Protein phosphatase 1K, mitochondrial OS=Mus musculus GN=Ppm1k PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.723e-20
Identity = 62/137 (45.26%), Postives = 89/137 (64.96%), Query Frame = -1
Query:  394 TSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGR--VNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFV 783
            TSG+TA VA++RD  +LVVA+ GDSR +L RKG+ + L+ DH P+ + EK+RI K GGF+    +G+  VNG L + R+IGD++ K +         V A P+ + I+L   DD FLV+  DGI   ++SQE+ DFV
Sbjct:  185 TSGTTATVALLRDGVELVVASVGDSRALLCRKGKPMKLTTDHTPERKDEKERIKKFGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKASG--------VIAEPETTRIKLYHADDSFLVLTTDGINFMVNSQEICDFV 313          
BLAST of CN188095 vs. ExPASy Swiss-Prot
Match: P2C25_ARATH (Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.723e-20
Identity = 63/176 (35.80%), Postives = 96/176 (54.55%), Query Frame = -1
Query:  268 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ----VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL--TNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 777
            GS    A++ +  LVV+NAGD R V+S  G A  LS DH+P  + E+ RI   GG++     V R+ GSL ++R IGD +          K+ V A P+     +  D EFL++A DG+WD +S+QE VD  R     T +  L   C+K+ D  L+ S G    D+++++L+  +
Sbjct:  231 GSCCVTALVNEGNLVVSNAGDCRAVMSVGGVAKALSSDHRPSRDDERKRIETTGGYVDTFHGVWRIQGSLAVSRGIGDAQL---------KKWVIAEPETKISRIEHDHEFLILASDGLWDKVSNQEAVDIARPLCLGTEKPLLLAACKKLVD--LSASRGSS--DDISVMLIPLR 393          
The following BLAST results are available for this feature:
BLAST of CN188095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
P2C09_ORYSJ5.487e-2144.36Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
P2C32_ORYSJ1.222e-2034.81Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
PPM1E_HUMAN1.597e-2038.60Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE... [more]
P2C75_ARATH1.597e-2043.75Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]
P2C08_ORYSJ1.597e-2035.38Probable protein phosphatase 2C 8 OS=Oryza sativa ... [more]
PPM1K_HUMAN2.085e-2039.89Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]
PPM1E_RAT2.085e-2038.01Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm... [more]
PPM1E_MOUSE2.085e-2038.01Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE... [more]
PPM1K_MOUSE2.723e-2045.26Protein phosphatase 1K, mitochondrial OS=Mus muscu... [more]
P2C25_ARATH2.723e-2035.80Probable protein phosphatase 2C 25 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188095 ID=CN188095; Name=CN188095; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTAGGATATCTATCCCATTAAAATGAAAAAGCTTAAATAT
TTACAACCAAATCATGAGAATCGTTTTCCGAATGTAAAATCAGGGACCAT
GGTTCTGAGCTCAGCAGTGTTTCAGACAGTAGAAAATGAGTACCATTTAG
TCAGTGCAAAGAGTGCTACAGCTAATTCGATTCAGTCCCTGCTGAACTGC
TGGCTAACTTGGATTGTTGGTCAGATGGTGGCTGCTCAGCCGCAGAAGGA
CCATTATTAGAAAGAATTTTAAACTGAACCAAGATCATGGTCATGTTGTC
GCATCCTTCACCACCAGCTGATGGAGCCAAGCACCGATCGAATACTTTCT
CGCAAATGACTGATAGTTTTGTTTCGTTGGTTAATTGATCCCTGACAAAA
TCGACAAGTTCTTGACTTGAAAGGCAATCCCAAATCCCATCACAAGCTAT
GACAAGAAACTCATCGTCATCACAAAGTTCAATAGTACTTATATCAGGAT
TGGCAGTCACAATCTGTTTTTCAGCAGGCAAACTTTTGTTTAGCTTGAAC
TCCACATCTCCAATAGCTCTCGCCAAATTTAAACTTCCATTAACACGTCC
AACTTGTATAAAACCACCAGCTTTGAGAATTCTATCTTTCTCAACCTCAA
GATCAGGCTTATGGTCTTTAGATAGATTAAGTGCCTGGCCCTTCCTCGAT
AACACACAACGAGAATCACCAGCATTTGCAACCACGAGTTGCTTGTCTCT
AATGATTGCTACGCAAGCTGTACTTCCAGAAGTTGGTCCATGAAAATCTG
AGTGAGGACCCTCCTCCGATGCCCAATCGTCAAAATGATCATT
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