CK939233

Overview
NameCK939233
Unique NameCK939233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.573e-24
Identity = 66/179 (36.87%), Postives = 94/179 (52.51%), Query Frame = 1
Query:  247 VEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL---------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            V+E+  R   + KNL  I   N +      +Y L +N   D + EE  +   G     S      H  + D L         P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G +  C
Sbjct:   41 VDEISRRLI-WEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLS------HSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC 210          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 70/186 (37.63%), Postives = 93/186 (50.00%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA-----QN-CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            F  F  ++ K Y S  E   RF  F  NL+ I + N    + +  +NKFAD S +E      G +     QN C            D  P   DWR    V+ VK+QG CG+CW F+T GSLE+ +     + I+LSEQQL+DC   F + GC+GGL   AFE +   GG+  E  YPY   +G C
Sbjct:   28 FEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVVVLDR---PPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDC--DFVDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDC 208          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 69/192 (35.94%), Postives = 103/192 (53.65%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRS--TNRKGLSYRLGLNKFADWSWEEFQRHRLG-----AAQNCSATTKGNHKLTADVLPETKDWRESGIVS--PVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVCXXS 753
            +A +  +Y + Y +  +   R+  F+ NL+ IR+   + +  ++ L LN+FAD S +EF +  L       A+  +A +   +K  A+V     DW ++  V    VK+QG CGSCW FS  G+LE        +   LSEQ LVDC+  ++N GCNGG    AFEY+  NG  + ++ YPYT  DG C  S
Sbjct:   26 YANWKMKYNRRYTNQRDEMYRYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSLKVPRTAKLNAANSNFQYK-GAEV-----DWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYDNDGCNGGWMDSAFEYVADNGLAEAKD-YPYTAKDGTCKTS 210          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.687e-23
Identity = 76/212 (35.85%), Postives = 105/212 (49.53%), Query Frame = 1
Query:  199 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH---------------KLT-ADVLPETKD----------WRESGIVSPVKDQG-HCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVCXXS 753
            + F  F  +Y K++ S ++   RF TF KN  +++ T++    Y L LNKF+D S EEF+          + T+   H               KL  A  + E KD          W  +  VSP+KDQG HCGSCW FS+  S+E+ Y     K   LSEQ+LV+C +  ++ GC GGLP  A EYI ++ G+  E   PYTG    C  S
Sbjct:  118 IEFDAFVEKYKKVHRSFDQRVQRFLTFRKNYHIVK-THKPTEPYSLDLNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCDK--SSMGCAGGLPITALEYI-HSKGVSFESEVPYTGIVSPCKPS 325          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.687e-23
Identity = 69/186 (37.10%), Postives = 94/186 (50.54%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA-----QN-CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            F  F  ++ K Y S  E   RF  F  NL+ I + N+   S +  +NKF+D S +E      G +     QN C            D  P   DWR    V+ VK+QG CG+CW F+T GSLE+ +     + I+LSEQQL+DC   F + GC+GGL   A+E +   GG+  E  YPY   +G C
Sbjct:   28 FEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGLSLPLQKQNFCEVVVLDR---PPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDC--DFVDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPC 208          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.204e-23
Identity = 69/174 (39.66%), Postives = 95/174 (54.60%), Query Frame = 1
Query:  253 EMKLRFATFSKNLDLIRSTNRK---GL-SYRLGLNKFADWSWEEFQRH----RLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA--QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            E  +R   + KNL  I   N +   G+ SY +G+N   D + EE   +    R+    N S T K +   T   LP++ DWRE G V+ VK QG CGSCW FS  G+LE       GK +SLS Q LVDC+  + + N+GC GG  ++AF+YI  +  +D+E +YPY   D  C
Sbjct:   42 EEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVIGYMGSLRIPRPWNRSGTLKSSSNQT---LPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYI-IDTSIDSEASYPYKAMDEKC 211          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23
Identity = 69/186 (37.10%), Postives = 94/186 (50.54%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA-----QN-CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            F  F  ++ K Y S  E   RF  F  NL+ I + N+   + +  +NKF+D S EE      G +     QN C            D  P   DWR+   V+ VK+QG CG+CW F+T GSLE+ +   + + I+LSEQQ +DC +   N GC+GGL   AFE     GG+  E  YPY   +G C
Sbjct:   28 FEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLSLPHQTQNFCEVVILDR---PPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDRV--NAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQC 208          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23
Identity = 69/185 (37.30%), Postives = 92/185 (49.73%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA-----QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            F  F   + K Y S  E   RF  F  NL+ I + N    S +  +NKF+D S +E      G +     QN       N     D  P   DWR    V+ VK+QG CG+CW F+T GSLE+ +     + I+LSEQQL+DC   F + GC+GGL   A+E +   GG+  E  YPY   +G C
Sbjct:   28 FEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISKYTGLSLPLQNQNFCEVVVLNRP--PDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDC--DFVDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDC 208          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23
Identity = 65/191 (34.03%), Postives = 96/191 (50.26%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN---HKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            +  F +++ K Y + ++    F  F +NL  + + N        G+NKF+D     F     G   N   +T  N   ++L   V         PE+ DWR+   V+ VK+QG CGSCW F+  G++E+ Y       I LSEQQL+DC +   +QGC+GGL   AF+ I   GG++ E  YPY G +  C
Sbjct:   33 YENFIKQHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDIDKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDRV--DQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIEYAC 221          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.373e-23
Identity = 65/181 (35.91%), Postives = 90/181 (49.72%), Query Frame = 1
Query:  199 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQN------CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 723
            L F +F  +Y K Y+S +E K R+  F  N++ I   N +  S    +N+FAD    E      G A        C               P + DWR    ++ VKDQG CG+CW F++ G+LE+ Y   + + I LSEQQLVDC   F + GC+GGL   A+E I   GG++ E  Y Y
Sbjct:   38 LYFEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEIVIRHTGLASGELGLNFCETIVVDGPAQRQR--PVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDC--DFVDMGCDGGLIHTAYEQIMKMGGVEQEFDYSY 214          
The following BLAST results are available for this feature:
BLAST of CK939233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATK_HUMAN7.573e-2436.87Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATV_NPVCF1.292e-2337.63Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATL1_PARTE1.292e-2335.94Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CYSP_THEAN1.687e-2335.85Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CATV_NPVAP1.687e-2337.10Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATS_RAT2.204e-2339.66Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATV_NPVOP4.909e-2337.10Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATV_NPVCD4.909e-2337.30Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATV_NPVST6.411e-2334.03Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATV_NPVSE8.373e-2335.91Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004432_E05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939233 ID=CK939233; Name=CK939233; organism=Citrus sinensis; type=EST; length=755bp
GGGGAAAAACAGACACAATCATTAGGCATGGCTCGCCCTGAACATTTGGT
CTCGTCCATCATCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAA
GCTTCGACGACTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGT
GACTTCGAGACCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCT
CTCCTTTGCCCGTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCCGTTG
AGGAGATGAAGCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATC
AGATCTACGAATCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTT
TGCTGATTGGAGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCAC
AAAACTGCTCTGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTG
CTTCCAGAAACGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAA
AGACCAAGGTCACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTC
TTGAGGCTGCTTACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAA
CAGCAGCTTGTAGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGG
TGGGTTGCCATCCCAAGCCTTTGAATACATCAAGTACAATGGTGGCCTTG
ATACTGAGGAAGCATATCCCTACACCGGATAAGATGGTGTCTGCANNNNC
TCATC
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