CK939233

Overview
NameCK939233
Unique NameCK939233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.091e-30
Identity = 77/171 (45.03%), Postives = 93/171 (54.39%), Query Frame = 1
Query:  253 EMKLRFATFSKNLDLIRSTNRKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN------HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            E   RF TF  N   I S N++G   YRL LN+F D    EF+   +G  +  +     +        L    LP + DWR+ G V+ VKDQG CGSCW FST  S+E       G  +SLSEQ+L+DC  A +N GC GGL   AFEYIK NGGL TE AYPY    G C
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTC 230          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 77/200 (38.50%), Postives = 109/200 (54.50%), Query Frame = 1
Query:  163 SVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            +++ VI  A     +A F + + + Y+S+ E KLRF  F   L  I   N K      +Y L +NKF+D + EEF R  L   +      +G     LT    PE+ DWR  G+V PV++QG CGSCW  ST  ++E+      G  + LS QQLVDC+ ++ N GCNGG     FEY+K N GL+++  YPY+G +  C
Sbjct:    9 ALIVVINAASDQELWADFKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEF-RDMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYVKDN-GLESDADYPYSGKEDKC 206          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.431e-30
Identity = 74/184 (40.22%), Postives = 102/184 (55.43%), Query Frame = 1
Query:  220 RRYGKIYESVEEMKLRFATFSKNLDLIRSTN-RKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETK--------DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            R +  +   ++E   RF  F +N+  I   N +K   Y+L LNKF D + +EF+    G+      + +G  K T   + E          DWR  G V+ VKDQG CGSCW FST  S+E       G+ +SLSEQ+LVDC  ++ N+GCNGGL   AFE+I+ N G+ TE++YPY   DG C
Sbjct:   44 RTHHTVARDLDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSY-NEGCNGGLMDYAFEFIQKN-GITTEDSYPYAEQDGTC 225          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.575e-29
Identity = 74/183 (40.44%), Postives = 102/183 (55.74%), Query Frame = 1
Query:  220 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            + YGK Y+   E  +R   + KNL  +   N +   G+ SY LG+N   D + EE        R+      + T K N      +LP++ DWRE G V+ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC++ + N+GCNGG  ++AF+YI  N G+D+E +YPY   D  C
Sbjct:   33 KTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPNQWQRNITYKSNPN---QMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKC 212          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29
Identity = 69/178 (38.76%), Postives = 99/178 (55.62%), Query Frame = 1
Query:  223 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRK-GLS---YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            +Y K Y  VEE +L+ A + +NL +I+  N++ GL    + + +N FAD + EEF++         + T     K  +  LP  KDWR+ G V+PV++QG CGSCW F+  G++E       G    LS Q L+DC+++  N GC  G   QAF Y+  N GL+ E  YPY G DG C
Sbjct:   35 KYAKSYSPVEE-ELKRAVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQKQVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKDGPC 211          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.987e-29
Identity = 76/184 (41.30%), Postives = 102/184 (55.43%), Query Frame = 1
Query:  220 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQA-FNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            + YGK Y+   E   R   + KNL  +   N +   G+ SY LG+N   D + EE        R+ +    + T K +       LP++ DWRE G V+ VK QG CGSCW FS  G+LEA      GK +SLS Q LVDC+ A + N+GCNGG  ++AF+YI  N G+D+E +YPY   DG C
Sbjct:   33 KTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSDPN---QKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKC 213          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.819e-29
Identity = 75/188 (39.89%), Postives = 96/188 (51.06%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            F  F  +Y K+Y+  +E + RF  F +NL  I + N    S    +N  AD S  E  +   G   +     K N   T  V+        P++ DWR+   V+ VK Q  CGSCW FS   ++E+ YH      + LSEQQLVDC +   N GCNGGL S AFE I   GG+  E  YPYTG DGVC
Sbjct:   43 FNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLSLMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKV--NNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC 228          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 7.819e-29
Identity = 61/135 (45.19%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  325 SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 729
            S+ + +N F D + EEF++   G         K   +     +P + DWRE G ++PVKDQG CGSCW FS TG+LE       GK ISL+EQ LVDC+    N+GCNGG     F Y++ NGGLD+E +YPY G
Sbjct:   15 SFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEG 149          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.819e-29
Identity = 67/178 (37.64%), Postives = 97/178 (54.49%), Query Frame = 1
Query:  223 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            +Y K Y   EE  LR A + +N+ +I+  N++      ++ + +NKF D + EEF++         + T        +  LP+ KDWRE G V+PV++QG CGSCW F+  G++E       G    LS Q L+DC++   N+GC  G   QAFEY+  N GL+ E  YPY G DG C
Sbjct:   35 KYAKSYSPKEEA-LRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKDGPC 211          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.021e-28
Identity = 75/189 (39.68%), Postives = 111/189 (58.73%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIR--STNRKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK-GNHKL-----TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            F  +   +G++Y + EE   R   F  N + IR  + NRK   S+RLGLNKFAD + +EF +  L A ++ S   K  N K+     + D  P + DWR+ G+++ VK QG CG  W FS TG++EAA+  A G  +SLSEQ+LVDC +   ++G   G   Q+FE++  +GG+ T++ YPY   +G C
Sbjct:   44 FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDCVE--ESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRC 230          
The following BLAST results are available for this feature:
BLAST of CK939233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CYSP1_HORVU1.091e-3045.03Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CATLL_PHACE1.425e-3038.50Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSP_HEMSP2.431e-3040.22Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CATS_SAIBB1.575e-2940.44Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATJ_RAT2.058e-2938.76Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATS_BOVIN5.987e-2941.30Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATV_GVXN7.819e-2939.89Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATL6_HUMAN7.819e-2945.19Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATJ_MOUSE7.819e-2937.64Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
P34_SOYBN1.021e-2839.68P34 probable thiol protease OS=Glycine max PE=1 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004432_E05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939233 ID=CK939233; Name=CK939233; organism=Citrus sinensis; type=EST; length=755bp
GGGGAAAAACAGACACAATCATTAGGCATGGCTCGCCCTGAACATTTGGT
CTCGTCCATCATCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAA
GCTTCGACGACTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGT
GACTTCGAGACCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCT
CTCCTTTGCCCGTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCCGTTG
AGGAGATGAAGCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATC
AGATCTACGAATCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTT
TGCTGATTGGAGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCAC
AAAACTGCTCTGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTG
CTTCCAGAAACGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAA
AGACCAAGGTCACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTC
TTGAGGCTGCTTACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAA
CAGCAGCTTGTAGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGG
TGGGTTGCCATCCCAAGCCTTTGAATACATCAAGTACAATGGTGGCCTTG
ATACTGAGGAAGCATATCCCTACACCGGATAAGATGGTGTCTGCANNNNC
TCATC
back to top