CK939233

Overview
NameCK939233
Unique NameCK939233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.021e-28
Identity = 79/198 (39.90%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYR----LGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDC--------AQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DG 738
            F  F  ++ K Y S EE   RF  F  NL  I   N   ++++     G+NKFAD S +EF+ + L    N       +    AD L        P   DWR  G V+PVK+QG CGSCW+FSTTG++E  +  +  K +SLSEQ LVDC         +   ++GCNGGL   A+ YI  NGG+ TE +YPYT   G
Sbjct:   29 FLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYL----NNKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETG 221          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.742e-28
Identity = 76/197 (38.58%), Postives = 107/197 (54.31%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL------------SYRLGLNKFADWSWEEFQRHRLGAAQNCSA--TTKGNH--KLTADV-LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            F  F ++Y K Y+  +E + R+  F  NL+ I S NR+ L            S + G+NKF+D + +E      G   N S   T   N   K   D+ LP+  DWR++  V+P+KDQG CGSCW F   G++E+ Y     K I LSEQQL+DC +   + GCNGGL   AF+ +   GG++TE  YPY G + +C
Sbjct:   57 FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDEV--DLGCNGGLMHLAFQELLLMGGVETEADYPYQGSEQMC 251          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28
Identity = 73/185 (39.46%), Postives = 102/185 (55.14%), Query Frame = 1
Query:  199 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQ-RHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI-KYNGG-LDTEEAYPYTG*DG 738
            + FA F ++YGK+Y+  +E   RF  F +N++  +           G+  F+D + EEF+ R+R GA+   +A  +      +T    P   DWRE G V+PVK QG CGSCW FST G++E  +  A    +SLSEQ LV C     + GCNGGL   AF +I   NGG + TE +YPY   +G
Sbjct:   39 MRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTI--DSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNG 221          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28
Identity = 73/182 (40.11%), Postives = 96/182 (52.75%), Query Frame = 1
Query:  199 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            ++F ++A  + K++ +  E   RFA F  N   + +      +    LN FAD + EEF +  LG       TT  N K      PE+ DWR   I++P KDQG CGSCWTF TT  LE   ++  GK  S SEQQLVDC  + N  GC GG PS + ++I+ N GL  E  YPY    G C
Sbjct:   16 VAFKQWAATHNKVFANRAEYLYRFAVFLDNKKFVEA------NANTELNVFADMTHEEFIQTHLGMTYEVPETTS-NVKAAVKAAPESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCDASDN--GCEGGHPSNSLKFIQENNGLGLESDYPYKAVAGTC 186          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28
Identity = 72/178 (40.45%), Postives = 100/178 (56.18%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLG--AAQNCSATTKGNHKLTADVL---PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY 723
            F  +  ++ KIYES++E   RF  F  NL  I  TN+K  SY LGLN FAD S +EF++  +G  A          N   T   +   P++ DWR  G V+PVK+QG CGSCW FST  ++E       G  + LSEQ+LVDC +  ++ GC GG  + + +Y+  N G+ T + YPY
Sbjct:   48 FDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQYVA-NNGVHTSKVYPY 222          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28
Identity = 71/184 (38.59%), Postives = 104/184 (56.52%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQ-RHRLGAAQNCSATTKGNHKLTADVL--PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYI--KYNGGLDTEEAYPYTG*DGV 741
            FA F +++G++YES  E   R + F +NL L R           G+  F+D + EEF+ R+  GAA   +A  +    +  +V+  P   DWR  G V+ VKDQG CGSCW FS  G++E  +  A     +LSEQ LV C +   + GC+GGL + AFE+I  + NG + TE++YPY   +G+
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGI 219          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.068e-28
Identity = 66/184 (35.87%), Postives = 103/184 (55.98%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRS-TNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK---GNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            F  +   YG++Y+  +E  LRF  F  N++ I +  NR G SY LG+N+F D +  EF     G +   +   +       +    +P++ DWR+SG V+ VK+QG CGSCW F++  ++E+ Y    G  +SLSEQQ++DCA ++   GC GG  ++A+ +I  N G+ +   YPY    G C
Sbjct:   37 FEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY---GCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTC 217          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28
Identity = 73/184 (39.67%), Postives = 102/184 (55.43%), Query Frame = 1
Query:  220 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            + YGK Y+   E  +R   + KNL  +   N +   G+ SY LG+N   D + EE        R+ +    + T K N      +LP++ DWRE G V+ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  + AF+YI  N G+D++ +YPY   D  C
Sbjct:   33 KTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNR---ILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKC 213          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28
Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 1
Query:  451 LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            +P++ DW + G V+PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVD ++   NQGCNGGL   AF+YIK NGGLD+EE+YPY   D  C
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSC 98          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.129e-27
Identity = 74/193 (38.34%), Postives = 99/193 (51.30%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRH----RLGAAQNCSATTKGNHKLTA------DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVCXXS 753
            F  FA +Y K Y S EE  ++   F  NL +I   N         +N+++D +     R     RLG  +N SA T     +         +LPET DWR+   V+PVK+Q  CGSCW FST  ++E+ Y+  + K ++LSEQ LV+C     N GC GGL   A E I   GG+ + E  PY G DGVC  S
Sbjct:   32 FKNFAIKYNKTYVSDEERAIKLENFKNNLKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCDNI--NNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVCKKS 222          
The following BLAST results are available for this feature:
BLAST of CK939233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CYSP1_DICDI1.021e-2839.90Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATV_NPVHZ1.742e-2838.58Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSP_TRYBB2.275e-2839.46Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
ACP1_ENTHI2.275e-2840.11Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
PAPA2_CARPA3.881e-2840.45Chymopapain OS=Carica papaya PE=1 SV=2[more]
CYSP_TRYCR3.881e-2838.59Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
ANAN_ANACO5.068e-2835.87Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CATS_HUMAN8.645e-2839.67Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATL1_SHEEP8.645e-2857.14Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATV_GVCP1.129e-2738.34Viral cathepsin OS=Cydia pomonella granulosis viru... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004432_E05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939233 ID=CK939233; Name=CK939233; organism=Citrus sinensis; type=EST; length=755bp
GGGGAAAAACAGACACAATCATTAGGCATGGCTCGCCCTGAACATTTGGT
CTCGTCCATCATCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAA
GCTTCGACGACTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGT
GACTTCGAGACCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCT
CTCCTTTGCCCGTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCCGTTG
AGGAGATGAAGCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATC
AGATCTACGAATCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTT
TGCTGATTGGAGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCAC
AAAACTGCTCTGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTG
CTTCCAGAAACGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAA
AGACCAAGGTCACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTC
TTGAGGCTGCTTACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAA
CAGCAGCTTGTAGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGG
TGGGTTGCCATCCCAAGCCTTTGAATACATCAAGTACAATGGTGGCCTTG
ATACTGAGGAAGCATATCCCTACACCGGATAAGATGGTGTCTGCANNNNC
TCATC
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