CK939233

Overview
NameCK939233
Unique NameCK939233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.129e-27
Identity = 68/179 (37.99%), Postives = 102/179 (56.98%), Query Frame = 1
Query:  223 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA-DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            +Y K Y S++E KL+   + + L +I+  NR+       + + +N+F D + EEF++  +  +       K   K  A  +LP+  DWR+ G V+PV+ QG C +CW F+ TG++EA      GK   LS Q LVDC++   N GC GG    AF+Y+ +NGGL++E  YPY G DG C
Sbjct:   35 KYNKSY-SLKEEKLKRVVWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKREAGSILPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPC 212          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27
Identity = 71/184 (38.59%), Postives = 99/184 (53.80%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLT---ADV-LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            F  +  ++ KIY++++E   RF  F  NL  I  TN+K  SY LGLN FAD S +EF+    G+      TT+ +++      DV +PE  DWR+ G V+PVK+QG CGSCW FS   ++E       G     SEQ+L+DC +   + GCNGG P  A + +    G+     YPY G    C
Sbjct:   48 FESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDR--RSYGCNGGYPWSALQLVA-QYGIHYRNTYPYEGVQRYC 228          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.515e-27
Identity = 72/179 (40.22%), Postives = 97/179 (54.19%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNL---DLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH-KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 729
            F  F   Y + YES EE + R + F  N+     I++ +R    Y  G+ KF+D + EEF+   L          K    K   D+ P   DWR  G V+ VKDQG CGSCW FS TG++E  +    G  +SLSEQ+L+DC +   ++ C GGLPS A+  IK  GGL+TE+ Y Y G
Sbjct:  187 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQY--GVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM--DKACMGGLPSNAYSAIKNLGGLETEDDYSYQG 361          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27
Identity = 72/184 (39.13%), Postives = 100/184 (54.35%), Query Frame = 1
Query:  220 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            + Y K Y+   E   R   + KNL  +   N +   G+ SY LG+N   D + EE        R+ +    + T + N       LP++ DWRE G V+ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  + AF+YI  N G+D+E +YPY   +G C
Sbjct:   33 KTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSN---QKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKC 213          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.604e-27
Identity = 74/187 (39.57%), Postives = 101/187 (54.01%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNL---DLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVCXXS 753
            F  F   Y + YES EE + R   F++N+     I++ +R    Y  G+ KF+D + EEF    L    Q  S       K   D+ P   DWR+ G V+ VK+QG CGSCW FS TG++E  +    G  +SLSEQ+L+DC +   ++ C GGLPS A+  IK  GGL+TE+ Y Y G    C  S
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQY--GITKFSDLTEEEFHTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDKV--DKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFS 347          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.318e-27
Identity = 73/186 (39.25%), Postives = 105/186 (56.45%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNL---DLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA---QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            + +F  +Y K Y   E+ ++RF  F  N+    L +   R    Y  G+  ++D + +EF R  L A+    +  + T  +     + +P+  DWRE G V+ VK+QG CGSCW FSTTG++E+ + +  GK +SLSEQQLVDC     + GCNGGLPS A+E I   GGL  E+ YPY   +  C
Sbjct:   20 YVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIY--GVTPYSDLTTDEFARTHLTASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCDGL--DDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKC 200          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.318e-27
Identity = 64/184 (34.78%), Postives = 100/184 (54.35%), Query Frame = 1
Query:  205 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTN-RKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK---GNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            F  +   YG++Y+  +E   RF  F  N+  I + N R   SY LG+N+F D +  EF     G +   +   +       +    +P++ DWR+ G V+ VK+Q  CGSCW+F+   ++E  Y    G  +SLSEQ+++DCA ++   GC GG  ++A+++I  N G+ TEE YPY    G C
Sbjct:   37 FEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY---GCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTC 217          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26
Identity = 68/182 (37.36%), Postives = 99/182 (54.40%), Query Frame = 1
Query:  220 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            + +GK Y S  +   R   + KNL  I   N +      +Y L +N   D + EE  +   G     S +   +   T +    +P++ D+R+ G V+PVK+QG CGSCW FS+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ NGG+D+E+AYPY G D  C
Sbjct:   31 KTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVS--ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC 210          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.129e-26
Identity = 71/183 (38.80%), Postives = 102/183 (55.74%), Query Frame = 1
Query:  220 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK---GL-SYRLGLNKFADWSWEEFQRHRLGAAQ--NCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA--QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG*DGVC 744
            + + K Y+   E ++R   + KNL  I   N +   G+ +Y++G+N   D + EE    R+GA +    S  T      +   LP+T DWRE G V+ VK QG CG+CW FS  G+LE       GK ISLS Q LVDC+  + + N+GC GG  ++AF+YI  NGG++ + +YPY   D  C
Sbjct:   41 KTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISC-RMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKC 222          
BLAST of CK939233 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26
Identity = 69/173 (39.88%), Postives = 94/173 (54.34%), Query Frame = 1
Query:  223 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYR----LGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG 729
            ++GK Y   EE +L+ A + KN  +I   N + L  R    + +N F D +  EF +   G  +     T          +P+  DWR+ G V+PVK+QGHC S W FS TGSLE    +   + I LSEQ L+DC  +    GC+GG    AF+Y+K NGGL TEE+YPY G
Sbjct:   35 KHGKTYNMNEE-RLKRAVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLYVPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRG 206          
The following BLAST results are available for this feature:
BLAST of CK939233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATR_MOUSE1.129e-2737.99Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
PAPA1_CARPA1.475e-2738.59Papain OS=Carica papaya PE=1 SV=1[more]
CATF_HUMAN2.515e-2740.22Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATS_CANFA4.290e-2739.13Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATF_MOUSE5.604e-2739.57Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATL_SCHMA7.318e-2739.25Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
BROM1_ANACO7.318e-2734.78Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATK_RAT1.248e-2637.36Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATS_MOUSE2.129e-2638.80Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
TEST2_RAT2.781e-2639.88Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004432_E05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939233 ID=CK939233; Name=CK939233; organism=Citrus sinensis; type=EST; length=755bp
GGGGAAAAACAGACACAATCATTAGGCATGGCTCGCCCTGAACATTTGGT
CTCGTCCATCATCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAA
GCTTCGACGACTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGT
GACTTCGAGACCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCT
CTCCTTTGCCCGTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCCGTTG
AGGAGATGAAGCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATC
AGATCTACGAATCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTT
TGCTGATTGGAGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCAC
AAAACTGCTCTGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTG
CTTCCAGAAACGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAA
AGACCAAGGTCACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTC
TTGAGGCTGCTTACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAA
CAGCAGCTTGTAGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGG
TGGGTTGCCATCCCAAGCCTTTGAATACATCAAGTACAATGGTGGCCTTG
ATACTGAGGAAGCATATCCCTACACCGGATAAGATGGTGTCTGCANNNNC
TCATC
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