CK939221

Overview
NameCK939221
Unique NameCK939221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.017e-27
Identity = 81/234 (34.62%), Postives = 127/234 (54.27%), Query Frame = 3
Query:  138 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAI-CGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGA----EIIGTFVLVYTVFS-ATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 815
            +AG+AEFI+TF+F++    + +   K  ++   +  G+   + A    +F  V   A ISGGH+NPAV  G F+   ++L R + Y++ Q LG+I C A +V               ++V A G ++G G+G     EI+ TF LVYTV++ A D K+     ++ I AP+ IGF V    L     TG  +NPA S G A++      W +HW++W GP +G G+A L ++V+
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLV-----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 235          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.441e-27
Identity = 86/235 (36.60%), Postives = 128/235 (54.47%), Query Frame = 3
Query:  111 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 806
            G+  S +  +A +AEFIAT LF++  V + +  G + +       G+  IA A    +F  V   A  SGGH+NPAVT GL +   +++   LFY V Q LGA     +++ F+  G+    A   + V+ G T+ +G+  EI+ TF LVYTV+ +A D K+ +    +   AP+ IGF V    LA  P +G  +NPARS G A+      G   +W++WVGP +G GLA L +
Sbjct:   10 GDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLR-FVTHGK----AIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAG---NWVYWVGPLIGGGLAGLVY 232          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.441e-27
Identity = 74/198 (37.37%), Postives = 107/198 (54.04%), Query Frame = 3
Query:  237 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV----KGFMGAGQYGRLA--GGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW--DDHWIFWVGPFVGAGL-AALY 803
            +G+ G+A+AFG  +  + +    ISG H+NPAV+ GL +  +      L Y++ Q +GAI  AGV+     G  G      LA  G A+    GYT G G  +E++ T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G A+      GW     W+FWV P +GA +  ALY
Sbjct:   35 IGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPALFVG---GWALQQLWLFWVAPLIGAAIGGALY 223          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.869e-27
Identity = 81/228 (35.53%), Postives = 119/228 (52.19%), Query Frame = 3
Query:  138 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSA-TDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 818
            +A I EFI TFLF++  V + M    S    + VG+  +A A    + A++     ISGGH+NPAVTLGL L   +S+ RA  Y + Q L +         F+ +   G +    + +A G +   G+  EII TF L++TV++   D K+ + D       PL  GF V    LA    +G  +NPARS G A++      W DHW++WVGP +G GLA   ++ V+
Sbjct:   19 KALIVEFITTFLFVFAGVGSAMAT-DSLVGNTLVGLFAVAVAHA-FVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAAC-----FLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGF----GPLLTGFVVGANILAGGAFSGASMNPARSFGPALV---SGNWTDHWVYWVGPLIGGGLAGFIYENVL 232          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.869e-27
Identity = 73/194 (37.63%), Postives = 104/194 (53.61%), Query Frame = 3
Query:  237 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 800
            +G  G+A AFG  +  + Y   GISGGH NPAV+LGL +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A+  ++       W+FWV P VGA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR-AALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.869e-27
Identity = 73/194 (37.63%), Postives = 104/194 (53.61%), Query Frame = 3
Query:  237 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 800
            +G  G+A AFG  +  + Y   GISGGH NPAV+LGL +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A+  ++       W+FWV P VGA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVALFADR-AALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.665e-27
Identity = 80/236 (33.90%), Postives = 124/236 (52.54%), Query Frame = 3
Query:  138 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGA------EIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 818
            RA +AEF +TF+F++    + + +VK   ++  S   +  +A A    +FA V  +  +SGGH+NPAV+ G  +  ++S+ RA++Y + Q LG+I  A V++               N+   G+    G+G       E++ TF L+YTV+ +A D KR A    V   APL IG  V    L   P  G  +NPA + G +++      W  HWIFWVGP +GA LAAL ++  +
Sbjct:   21 RASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTN-----------NMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV---GWQWHQHWIFWVGPLLGAALAALVYEYAV 238          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.001e-26
Identity = 78/237 (32.91%), Postives = 119/237 (50.21%), Query Frame = 3
Query:  138 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIP 830
            RA ++EF+AT +F++ +  +V G+ K      T+G +  +A A    + A V  +   SGGH+NPAVT G+ + R++S  RA  Y   Q LGA+    ++          RLA G        + H   +   L  E++ TF LVYTV++    +RS         APL IG       LA  P  G  +NPAR+ G A++      W  HW++W+GP +GAG+A   ++ V+   P
Sbjct:   29 RAALSEFVATAVFVFAAEGSVYGLWKMYRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLL----------RLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALV---GWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQP 248          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.708e-26
Identity = 73/194 (37.63%), Postives = 103/194 (53.09%), Query Frame = 3
Query:  237 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 800
            +G  G+A AFG  +  + Y   GISGGH NPAV+LGL +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A ++         W+FWV P VGA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.913e-26
Identity = 84/242 (34.71%), Postives = 121/242 (50.00%), Query Frame = 3
Query:  108 PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG-LGA---EIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQV 812
            P E       +A +AEFI+T +F+     + M   K     +T   G+   A A    +F  V   A ISGGH+NPAVT G F+   ++L R + Y + Q LG++    ++K            GG  V A G + G G L A   EI+ TF LVYTV+ +A D K  +    +   AP+ IGF V    LA    +G  +NPA + G A++      W +HW++W GP VG G+A L ++V
Sbjct:   11 PDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK---------FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYEV 236          
The following BLAST results are available for this feature:
BLAST of CK939221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
TIP1_MEDSA2.017e-2734.62Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP22_MAIZE3.441e-2736.60Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
AQPZ_PSEPK3.441e-2737.37Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
TIP41_ARATH5.869e-2735.53Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
AQPZ_BRUAB5.869e-2737.63Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA25.869e-2737.63Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
TIPA_PHAVU7.665e-2733.90Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP32_ORYSJ1.001e-2632.91Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
AQPZ_BRUME1.708e-2637.63Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
TIP11_ARATH2.913e-2634.71Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004432_F02 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939221 ID=CK939221; Name=CK939221; organism=Citrus sinensis; type=EST; length=919bp
GGGGACTGGNNNCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCG
GCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCGCCGCT
CTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAG
CCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAGTG
ATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATTCAAGG
GATTGCATGGGCCTTCGGTGGCATGATCTTCGCGCTCGTTTACTGCACAG
CTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTC
TTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCA
GTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATGGGTG
CCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGC
TACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCT
TGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACT
CTCATGTTCCTATTTCGGCTCCTCTGCCAATTGGGTTCGCTGTGTTTTTG
GTTCACTTGGCTACCATCCCAATTACCGGAACTGGCATCAACCCAGCGAG
GAGTCTTGGAGCTGCAATCATCTACAACAAGGACCGCGGTTGGGATGACC
ACTGGATTTTCTGGGTGGGACCATTCGTTGGAGCTGGACTTGCAGCTTTG
TACCACCAAGTCGTGATCAGAGCCATTCCCTTCAAATGAAGCTGATCGCT
TCATCGACGTTCGTGATTGCACCTGCATTTGTTTATGGCTGTTGCTGGTT
TGCTTATGTGTATTATAAA
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