CK939221

Overview
NameCK939221
Unique NameCK939221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.969e-26
Identity = 81/245 (33.06%), Postives = 123/245 (50.20%), Query Frame = 3
Query:   99 LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK---GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 815
            ++ PG LK      A +AEFI+T +F++    + M   K     +T   G+   A A    +F  V   A ISGGH+NPAVT G F+   ++L R L Y + Q LG+     +++   G +  G +G           G +  + L  EI+ TF LVYTV+ +A D K+ +    +   AP+ IGF V    L      G  +NPA S G A++      W+  W++WVGP +G GLA + ++V+
Sbjct:   14 VYHPGALK------AALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFG---------LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWESQWVYWVGPLIGGGLAGVIYEVL 236          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.969e-26
Identity = 79/228 (34.65%), Postives = 114/228 (50.00%), Query Frame = 3
Query:  141 AGIAEFIATFLFLYISVLTV------MGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG----ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 794
            A + EF  TF+FL+ + +        + +V +        +  IA  FG  +   ++C AG+SGG +NPAV+L L LAR +S TR +   V Q         +V G    G    +  G    AN +  G ++  GL  E+ GT +L  TV      KR          A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W+GP +G+ LA
Sbjct:   51 AAVGEFCGTFMFLWCAYVICNVANHDVALVAAPDGSHPGQLIMIAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQ---------IVAGMAAGGAASAMTPGEVLFANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILA 262          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.489e-26
Identity = 79/226 (34.96%), Postives = 113/226 (50.00%), Query Frame = 3
Query:  141 AGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG--------IAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA 794
            A + EF  TF+FL+ +   V+  V ++    T   +G        IA  FG  +   ++C AG+SGG +NPAV+L L LAR +S  R +     Q +  +   G           G++    N +  G ++  GL  E+ GT VL  TV      KR          A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W+GP +GA LA
Sbjct:   50 AAVGEFCGTFMFLWCAY--VICNVANHDVALTTEPEGSHPGQLIMIALGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTP----GKVLF-TNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLA 261          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 8.475e-26
Identity = 81/226 (35.84%), Postives = 119/226 (52.65%), Query Frame = 3
Query:  138 RAGIAEFIATFLFLYISVLTVMGV--VKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 806
            +A +AEFIAT LF++  V + +    +         G+  IA A    +F  V   A ISGGH+NPAVT GL +   +++   + Y V Q LGA     +++ ++  GQ     G       G ++ +G+  EI+ TF LVYTV+ +A D K+ +    +   AP+ IGF V    LA  P +G  +NPARS G A+      G   +W++WVGP VG GLA L +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQ-YVTHGQAIPTHG-----VSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAG---NWVYWVGPLVGGGLAGLVY 231          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.475e-26
Identity = 72/194 (37.11%), Postives = 102/194 (52.58%), Query Frame = 3
Query:  237 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAAL 800
            +G  G+A AFG  +  + Y   GISGGH NPAV+L L +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A ++         W+FWV P VGA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.107e-25
Identity = 77/233 (33.05%), Postives = 116/233 (49.79%), Query Frame = 3
Query:  138 RAGIAEFIATFLFLYISVLT--VMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG----LGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 815
            RA +AEFI+T +F++    +      +  N   +  G+   A A    +F  V   A ISGGH+NPAVT G+ L   ++L R + Y + Q LG++    ++             GG  + A G + G G    L  EI+ TF LVYTV+ +A D K  +    +   AP+ IGF V    LA    +G  +NPA + G A++      W +HW++W GP +G GLA + +  V
Sbjct:   22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLL---------SFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLIGGGLAGIIYDFV 238          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.446e-25
Identity = 69/202 (34.16%), Postives = 103/202 (50.99%), Query Frame = 3
Query:  237 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV-----------KGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPIS-APLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW--DDHWIFWVGPFVGAGLAAL 800
            +G+ G+++AFG  +  + Y   GISGGH NPAV+LGL +A ++     + Y++ Q  GAI  A V+            G   A  YG  + G      GY+    L  E++ TF  +  +  +T  +       VP   AP+ IG A+ L+HL +IP+T T +NPARS G A+      GW     W+FW+ P  GA +A +
Sbjct:   34 IGLLGVSFAFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPG------GYSLTAALVTEVVMTFFFLIIILGSTHRR-------VPAGFAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQALFVG---GWALSQLWLFWIAPLFGAAIAGI 219          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.888e-25
Identity = 79/240 (32.92%), Postives = 116/240 (48.33%), Query Frame = 3
Query:  111 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAG--ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 824
            GE     F+R  + E + TFLF++I V   M    + TK ST G    A A G  +   V  TAG  ISGGH+NPAVTL L +   ++L R+  Y+  Q L +     +++   G      LA   + +A G     G+ AE + TF L++ +++     R      +P + PL  G  V    +A   ++G  +NPARS G A+       W  HW++WVGP  G  LA L ++    A
Sbjct:   10 GEASEPDFFRGVLGELVLTFLFVFIGVGAAM-TDGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGG-----LATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL----LPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGV---WTHHWVYWVGPLAGGPLAVLVYECCFMA 236          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.466e-25
Identity = 77/232 (33.19%), Postives = 113/232 (48.71%), Query Frame = 3
Query:  138 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV-GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIP 830
            RA +AE + TFLF++  V + M   K      T+ G+  +A A   ++  +V     +SGGHINPAVTLGL     ++L R+  Y   Q LG+     ++    G    G  A   +  A G      +  E + TF L++ V++    +R A    V    PL +G  V    LA  P +G  +NPARS G A+   +   W DHWI+WVGP +G  LA L ++ +    P
Sbjct:   19 RAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTG----GEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRA----VGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGE---WADHWIYWVGPLIGGPLAGLVYEGLFMGPP 239          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.221e-25
Identity = 76/237 (32.07%), Postives = 116/237 (48.95%), Query Frame = 3
Query:  114 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 824
            E+++  F+R+ I+E +A+F++++I      GV    +  S   +   A A G  +  L  C   ISG HINPAVTL L + R +S  RA  Y+  QC G I GA ++ G    G  G L    +  A      +  G E I TF++V   F +TD  +         ++   IG A       ++P     +NPARSLG + + NK   WD HW++W GP VG   + L ++ +  +
Sbjct:   58 EIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSV--LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSA-ALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMG-----NSAASIGCAYSACCFVSMPY----LNPARSLGPSFVLNK---WDSHWVYWFGPLVGGMASGLVYEYIFNS 279          
The following BLAST results are available for this feature:
BLAST of CK939221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
TIP11_ORYSJ4.969e-2633.06Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
AQY1_YEAST4.969e-2634.65Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQY2_YEAST6.489e-2634.96Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
TIP23_MAIZE8.475e-2635.84Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
AQPZ_BRUSU8.475e-2637.11Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
TIP12_ARATH1.107e-2533.05Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
AQPZ2_RHIME1.446e-2534.16Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
TIP43_MAIZE1.888e-2532.92Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP43_ORYSJ2.466e-2533.19Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
BIB_DROME3.221e-2532.07Neurogenic protein big brain OS=Drosophila melanog... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004432_F02 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939221 ID=CK939221; Name=CK939221; organism=Citrus sinensis; type=EST; length=919bp
GGGGACTGGNNNCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCG
GCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCGCCGCT
CTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAG
CCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAGTG
ATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATTCAAGG
GATTGCATGGGCCTTCGGTGGCATGATCTTCGCGCTCGTTTACTGCACAG
CTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTC
TTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCA
GTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATGGGTG
CCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGC
TACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCT
TGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACT
CTCATGTTCCTATTTCGGCTCCTCTGCCAATTGGGTTCGCTGTGTTTTTG
GTTCACTTGGCTACCATCCCAATTACCGGAACTGGCATCAACCCAGCGAG
GAGTCTTGGAGCTGCAATCATCTACAACAAGGACCGCGGTTGGGATGACC
ACTGGATTTTCTGGGTGGGACCATTCGTTGGAGCTGGACTTGCAGCTTTG
TACCACCAAGTCGTGATCAGAGCCATTCCCTTCAAATGAAGCTGATCGCT
TCATCGACGTTCGTGATTGCACCTGCATTTGTTTATGGCTGTTGCTGGTT
TGCTTATGTGTATTATAAA
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