CK939221

Overview
NameCK939221
Unique NameCK939221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.945e-38
Identity = 97/237 (40.93%), Postives = 137/237 (57.81%), Query Frame = 3
Query:  129 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 836
            +F++A  AEF+A  +F+ +S+ + +       K   V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G  +V    T G GL  E+I TF LV+T+F++ D+KR    + V  S  L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA  LY  V    + FK
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINW-GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCPDVEFK 259          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.540e-38
Identity = 95/244 (38.93%), Postives = 138/244 (56.56%), Query Frame = 3
Query:  114 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-----VKSNTKCSTVG----IQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 818
            E K  +F+RA IAEF+A  LF++IS+   +G       K+N    TVG    I  ++ AFG  I  +      +SG H+NPAVTLG  L+ ++S+ +A+ Y++ QCLGA+    ++ G     +   L  G N ++ G + G GLG EI+ TF LV  V + TD +R      V  S PL IG +V L HL  I  TG G+NPARS G+A++    + +  HWIFWVGP +G   AA+ +  ++
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKAN---QTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSL--GLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRR----HDVSGSVPLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL---TKNFTYHWIFWVGPMIGGAAAAIIYDFIL 235          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 3.317e-38
Identity = 98/237 (41.35%), Postives = 136/237 (57.38%), Query Frame = 3
Query:  129 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 836
            +F++A  AEF+AT +F+ + V + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY++ QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR    + V  S  L IGF+V + HL  I  TG  +NPARS G A+I      W +HWI+WVGP +GA LA ALY  V    +  K
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWANHWIYWVGPIMGAVLAGALYEYVFCPDVELK 259          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.261e-37
Identity = 97/236 (41.10%), Postives = 135/236 (57.20%), Query Frame = 3
Query:  114 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS-NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 818
            EL+S SF+RA +AEF+ + L+      T++G+  S        G+ G A AFG     LV     +SGGHINPA+TL   LA +LSL RAL Y++ Q LGA+ GAGV+ G   A   G L  G + +      G G   E++ T   +  VF++ D +   R    P SA LP+GF++ L HL  IP TG G+NPARS   A+I    R + +HW+FW GP +GA LAAL +++ +
Sbjct:    3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTL--GLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAALLYELAL 223          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.646e-37
Identity = 98/238 (41.18%), Postives = 136/238 (57.14%), Query Frame = 3
Query:  129 SFYRAGIAEFIATFLFLYISV-LTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 836
            +F++A  AEF+A  +F+ +S+  T+    K N     V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR    + V  S  L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA  LY  V    +  K
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL--PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCPDVELK 259          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.808e-37
Identity = 93/232 (40.09%), Postives = 134/232 (57.76%), Query Frame = 3
Query:  114 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 806
            E+ S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+V Q +GAI GAG++ G       G LA   N + +  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA +AA+ +
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLA--VNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAAVAAILY 221          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.105e-36
Identity = 91/232 (39.22%), Postives = 134/232 (57.76%), Query Frame = 3
Query:  114 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 806
            E+ S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+  Q +GAI GAG++         G LA   N +++  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA LAA+ +
Sbjct:    4 EVCSVAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLA--VNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAVLAAILY 221          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.055e-36
Identity = 92/232 (39.66%), Postives = 133/232 (57.33%), Query Frame = 3
Query:  114 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 806
            E+ S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+TL L +  ++SL RA FY+  Q +GAI GAG++ G       G LA   N + +  T+G  +  E+I TF L   +F++TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA LAA+ +
Sbjct:    4 EVCSVAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA--VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPAHWVFWVGPIVGAVLAAILY 221          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 5.296e-36
Identity = 93/237 (39.24%), Postives = 135/237 (56.96%), Query Frame = 3
Query:  129 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 836
            +F++A  AEF+A  +F+ +S+ + +    +  K   V +  I+  FG  I  +V C   ISGGHINPAVT+ +   R++S+ +++FY+  QCLGAI GAG++         G L  G   V    + G GL  E+I TF LV+T+F++ D+KR    + V  S  L IG +V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA  LY  V    +  K
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCPDVELK 259          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.917e-36
Identity = 91/232 (39.22%), Postives = 133/232 (57.33%), Query Frame = 3
Query:  114 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 806
            E+ S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+  Q +GAI GAG++         G LA   N + +  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA LAA+ +
Sbjct:    4 EVCSLAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLA--VNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAMLAAILY 221          
The following BLAST results are available for this feature:
BLAST of CK939221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
AQP4_HUMAN1.945e-3840.93Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQPA_RANES2.540e-3838.93Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_MOUSE3.317e-3841.35Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
MIP_CHICK1.261e-3741.10Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP4_DIPME1.646e-3741.18Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP5_PIG2.808e-3740.09Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP5_MOUSE3.105e-3639.22Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_HUMAN4.055e-3639.66Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP4_BOVIN5.296e-3639.24Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP5_RAT6.917e-3639.22Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004432_F02 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939221 ID=CK939221; Name=CK939221; organism=Citrus sinensis; type=EST; length=919bp
GGGGACTGGNNNCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCG
GCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCGCCGCT
CTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAG
CCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAGTG
ATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATTCAAGG
GATTGCATGGGCCTTCGGTGGCATGATCTTCGCGCTCGTTTACTGCACAG
CTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTC
TTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCA
GTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATGGGTG
CCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGC
TACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCT
TGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACT
CTCATGTTCCTATTTCGGCTCCTCTGCCAATTGGGTTCGCTGTGTTTTTG
GTTCACTTGGCTACCATCCCAATTACCGGAACTGGCATCAACCCAGCGAG
GAGTCTTGGAGCTGCAATCATCTACAACAAGGACCGCGGTTGGGATGACC
ACTGGATTTTCTGGGTGGGACCATTCGTTGGAGCTGGACTTGCAGCTTTG
TACCACCAAGTCGTGATCAGAGCCATTCCCTTCAAATGAAGCTGATCGCT
TCATCGACGTTCGTGATTGCACCTGCATTTGTTTATGGCTGTTGCTGGTT
TGCTTATGTGTATTATAAA
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