CK939221

Overview
NameCK939221
Unique NameCK939221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 83/229 (36.24%), Postives = 119/229 (51.97%), Query Frame = 3
Query:  138 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 815
            +A +AEFI+T +F++  V + +   K          G+  +A   G  +F  V   A ISGGH+NPAVT GL L  ++++   +FY + Q LGAI GA +V+   G         G           +G+  EII TF LVYTV+ +A D K+ +    +   AP+ IGF V    L   P +G  +NPARS G A+       + + WI+WVGP VG GLA L ++ V
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGAF-------EGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAV---ASGDYTNIWIYWVGPLVGGGLAGLVYRYV 234          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 74/229 (32.31%), Postives = 119/229 (51.97%), Query Frame = 3
Query:  135 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIR 821
            +R  + E + TF  +++ V        S T  S   +  IA+ FG  +  +      +SG HINPAVTLG  +  ++S+ +A FY+++QC+GAI GA V+K  +     G L  G +           +  E + TF+LV+ V + +D  R      +  SAPL +G A+   HL  I ++G  +NPARS G A++      W  HW++WVGP  G  LA + ++++ +
Sbjct:   23 WRMLLGELVGTFFLIFVGV-------GSTTSGS---VPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDL--GVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVVQGV---WTYHWVYWVGPIAGGLLAGIIYRLIFK 232          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 82/237 (34.60%), Postives = 123/237 (51.90%), Query Frame = 3
Query:  129 SFYRAGIAEFIATF-LFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAH------GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 818
            S  +  +AEFI TF L L      V+     N     +G  G++ AFG  +  + +    ISG HINPAV++GL+ A++   T  L Y+  Q LG I GAGV+    G      L+GG     +      GYT    L  E++ TF+ +  +  +TD +R+ +       AP+ IG ++ L+HL +IP+T T +NPARS G A+    D    + W+FW+ P VGA LA L++   +
Sbjct:    2 SLVKRSVAEFIGTFWLVLGGCGAAVLAAAFPNLG---IGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGAGVLYLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTD-RRAPKG-----FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPALFVG-DWAIAELWLFWLAPIVGAALAGLFYHAFL 228          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.308e-28
Identity = 79/232 (34.05%), Postives = 122/232 (52.59%), Query Frame = 3
Query:  138 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV----GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 818
            RA I+EFIAT +F++ +  +V+ + K     ST+    G+  +A A    +   V     +SGGH+NPAVT G  +  ++SL RA+ Y   Q LGA+    +++   G  +    A     +A G   G  +  E + TF  VY  + +  D KR     H+   APL +GF +    LA  P  G G+NPAR  G A++  +   W  HW++W+GPF+GAGLA L ++ ++
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFA-----LASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGLVYEYLL 247          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.933e-28
Identity = 88/235 (37.45%), Postives = 130/235 (55.32%), Query Frame = 3
Query:  111 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 806
            G+  S +  +A +AEFIAT LF++  V + +  G + +       G+  IA A    +F  V   A ISGGH+NPAVT GL +   +++   +FY V Q LGA   A ++ GF+  G+    A   + VA G ++ +G+  E++ TF LVYTV+ +A D K+ +    +   AP+ IGF V    LA  P +G  +NPARS G A+      G   +W++WVGP VG GLA L +
Sbjct:   10 GDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGFVTHGK----AIPTHAVA-GISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAG---NWVYWVGPLVGGGLAGLVY 231          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 9.055e-28
Identity = 87/247 (35.22%), Postives = 125/247 (50.61%), Query Frame = 3
Query:  102 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAA-LYHQVVI 818
            F  G LK++      +AEFIAT LF++  V + +   K  ++      G+  +A A    +F  V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +   AP+ IGF V    LA  P +G  +NPARS G A++      +  +WI+W GP +G GLA  +Y  V I
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAG---DFSQNWIYWAGPLIGGGLAGFIYGDVFI 237          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.055e-28
Identity = 86/235 (36.60%), Postives = 127/235 (54.04%), Query Frame = 3
Query:  111 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 806
            G+  S +  +A +AEFIAT LF++  V + +  G + +       G+  IA A    +F  V   A ISGGH+NPAVT GL +   +++   LFY + Q LGA     ++K F+  G+     G A     G ++ +G+  EI+ TF LVYTV+ +A D K+ +    +   AP+ IGF V    LA  P +G  +NPARS G A+      G   +W++WVGP +G GLA L +
Sbjct:   10 GDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLK-FVTHGKAIPTHGVA-----GISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAG---NWVYWVGPLIGGGLAGLVY 231          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.055e-28
Identity = 87/247 (35.22%), Postives = 125/247 (50.61%), Query Frame = 3
Query:  102 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAA-LYHQVVI 818
            F  G LK++      +AEFIAT LF++  V + +   K  ++      G+  +A A    +F  V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +   AP+ IGF V    LA  P +G  +NPARS G A++      +  +WI+W GP +G GLA  +Y  V I
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAG---DFSQNWIYWAGPLIGGGLAGFIYGDVFI 237          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.055e-28
Identity = 78/239 (32.64%), Postives = 122/239 (51.05%), Query Frame = 3
Query:  108 PGELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 815
            PGE       RA  AEF +  +F++    + M  G +  +   +  G+   + +    +F  V   A +SGGH+NPAVT G F+   ++L RA+ Y + Q LGA+    ++K   G      +   A  +++G T  + +  EI+ TF LVYTV+ +A D K+      + I APL IG  V    L      G  +NPA S G A++      W +HW++WVGPF+GA +AA+ +  +
Sbjct:   11 PGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGG-----METAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
BLAST of CK939221 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 84/227 (37.00%), Postives = 119/227 (52.42%), Query Frame = 3
Query:  138 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPISAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 818
            RA  AEF+AT L+++  V +VM         +   +  IA  F  +    V  T   SG H NPAVTL   +   +SL RA+ Y+  Q +GA  GA ++ G M       L  G NVV +  + G  +  E++ T  LV  VF++TD+++++       S    IG +V L HL  I  TG  +NPARS G AII  K   +  HW+FWVGP +GA LA+L +  V+
Sbjct:   25 RALFAEFLATGLYVFFGVGSVM-----RWPTALPSVLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETL--GINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSG------SPATMIGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          
The following BLAST results are available for this feature:
BLAST of CK939221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
TIP22_ORYSJ3.112e-2836.24Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
AQP_DROME3.112e-2832.31Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
AQPZ_GLOVI3.112e-2834.60Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]
TIP32_MAIZE5.308e-2834.05Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP21_MAIZE6.933e-2837.45Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP2_TOBAC9.055e-2835.22Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP21_ORYSJ9.055e-2836.60Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP1_TOBAC9.055e-2835.22Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP13_ARATH9.055e-2832.64Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
AQP6_HUMAN1.545e-2737.00Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004432_F02 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939221 ID=CK939221; Name=CK939221; organism=Citrus sinensis; type=EST; length=919bp
GGGGACTGGNNNCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCG
GCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCGCCGCT
CTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAG
CCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAGTG
ATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATTCAAGG
GATTGCATGGGCCTTCGGTGGCATGATCTTCGCGCTCGTTTACTGCACAG
CTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTC
TTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCA
GTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATGGGTG
CCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGC
TACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCT
TGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACT
CTCATGTTCCTATTTCGGCTCCTCTGCCAATTGGGTTCGCTGTGTTTTTG
GTTCACTTGGCTACCATCCCAATTACCGGAACTGGCATCAACCCAGCGAG
GAGTCTTGGAGCTGCAATCATCTACAACAAGGACCGCGGTTGGGATGACC
ACTGGATTTTCTGGGTGGGACCATTCGTTGGAGCTGGACTTGCAGCTTTG
TACCACCAAGTCGTGATCAGAGCCATTCCCTTCAAATGAAGCTGATCGCT
TCATCGACGTTCGTGATTGCACCTGCATTTGTTTATGGCTGTTGCTGGTT
TGCTTATGTGTATTATAAA
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