CN188066

Overview
NameCN188066
Unique NameCN188066
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188066 vs. ExPASy Swiss-Prot
Match: SUT33_ARATH (Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.353e-17
Identity = 45/144 (31.25%), Postives = 84/144 (58.33%), Query Frame = -3
Query:  320 VARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRD-EQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKM-ILSKFIDVIGKDSVFLSIEDAI 745
            V RP    +G I  +++Y D   Y+ AQ  PG L+L + SP+ FAN NY+ ER  RWI + E+  +  K   ++ ++L++S VS +D  G++ F+E+ +    K I++  +NP   V++K+    +  + +  + +FL++ +A+
Sbjct:  475 VTRPKMVIMGNIPGTDIYRDLHHYKEAQRIPGFLVLSIESPVNFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLSEVVEKLQRADEQKEFMRPEFLFLTVAEAV 618          
BLAST of CN188066 vs. ExPASy Swiss-Prot
Match: SUT21_ARATH (Sulfate transporter 2.1 OS=Arabidopsis thaliana GN=SULTR2;1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.937e-17
Identity = 50/147 (34.01%), Postives = 87/147 (59.18%), Query Frame = -3
Query:  311 RPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIY-FANCNYIRERVLRWIRDEQVLSNSKPDV---IEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDAC 739
            RP    LG++  ++ + DT QY      PG+LI ++ S +  FAN + I ER++ W+ +E+   N+K +    I  V+LD+S +  +D +GI A  E+   L    +++ ++NP+  V+ K+  +KF+D IG   V+L+I +A+DAC
Sbjct:  527 RPGIETLGRMPGTDTFTDTNQYPMTVKTPGVLIFRVKSALLCFANASSIEERIMGWVDEEEEEENTKSNAKRKILFVVLDMSSLINVDTSGITALLELHNKLIKTGVELVIVNPKWQVIHKLNQAKFVDRIG-GKVYLTIGEALDAC 672          
BLAST of CN188066 vs. ExPASy Swiss-Prot
Match: SUT41_ARATH (Sulfate transporter 4.1, chloroplastic OS=Arabidopsis thaliana GN=SULTR4;1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.685e-16
Identity = 43/146 (29.45%), Postives = 84/146 (57.53%), Query Frame = -3
Query:  311 ARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRW--IRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDAC 742
            A P    LG++  + +Y + +QY  A  + GI+I+++ SPIYFAN +YI++R+  +    D+      + D I  V+L++S V+ ID + + A +E+ +  + + I++ + NP   V   +  S  ++++GK+  F+ + DA+  C
Sbjct:  497 ANPHIAVLGRLPGTTVYRNIKQYPEAYTYNGIVIVRIDSPIYFANISYIKDRLREYEVAVDKYTNRGLEVDRINFVILEMSPVTHIDSSAVEALKELYQEYKTRDIQLAISNPNKDVHLTIARSGMVELVGKEWFFVRVHDAVQVC 642          
BLAST of CN188066 vs. ExPASy Swiss-Prot
Match: SUT42_ARATH (Probable sulfate transporter 4.2 OS=Arabidopsis thaliana GN=SULTR4;2 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.685e-15
Identity = 41/146 (28.08%), Postives = 85/146 (58.22%), Query Frame = -3
Query:  311 ARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDV--IEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDAC 742
            A P    LG++  + +Y + +QY  A  + GI+I+++ +PIYFAN +YI++R+  +       ++  PD+  I  V+L++S V+ ID + + A +++    + + I++ + NP   V+  +  +  +++IGK+  F+ + DA+  C
Sbjct:  484 ANPHIAVLGRLPGTTVYRNMKQYPEAYTYNGIVIVRIDAPIYFANISYIKDRLREYEVAIDKHTSKGPDMERIYFVILEMSPVTYIDSSAVEALKDLYEEYKTRGIQLAISNPNKEVLLTLARAGIVELIGKEWFFVRVHDAVQVC 629          
BLAST of CN188066 vs. ExPASy Swiss-Prot
Match: SUT22_ARATH (Sulfate transporter 2.2 OS=Arabidopsis thaliana GN=SULTR2;2 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.400e-14
Identity = 43/146 (29.45%), Postives = 89/146 (60.96%), Query Frame = -3
Query:  317 RPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIY-FANCNYIRERVLRWIRDEQVLSNS----KPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAID 739
            RP+   LG++S ++++ D  QY  A    G+L L++ SP+  FAN N+IR+R+L  +++ +   N     K + ++ V+LD+S V  +D +G+ A  E+ + L +  I++ + +PR  V+ K+  +K  + I  +++++++ +A+D
Sbjct:  500 RPSIEALGRLSKTDIFGDINQYPMANKTAGLLTLRISSPLLCFANANFIRDRILNSVQEIEGEENEQEVLKENGLQVVILDMSCVMGVDTSGVFALEELHQELASNDIRLVIASPRWRVLHKLKRAKLDEKIKTENIYMTVGEAVD 645          
The following BLAST results are available for this feature:
BLAST of CN188066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SUT33_ARATH1.353e-1731.25Probable sulfate transporter 3.3 OS=Arabidopsis th... [more]
SUT21_ARATH3.937e-1734.01Sulfate transporter 2.1 OS=Arabidopsis thaliana GN... [more]
SUT41_ARATH5.685e-1629.45Sulfate transporter 4.1, chloroplastic OS=Arabidop... [more]
SUT42_ARATH3.685e-1528.08Probable sulfate transporter 4.2 OS=Arabidopsis th... [more]
SUT22_ARATH1.400e-1429.45Sulfate transporter 2.2 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188066 ID=CN188066; Name=CN188066; organism=Citrus sinensis; type=EST; length=747bp
CTTTTTTTAAAAATATGGTATTTTATTCATTGTTGCTGGCTAACAAGCCA
CCCATTTACTAATTTCATATTTTCTCTTTGAAAAAAGAGAAAATCACGTT
GCATGAGATTTAGAGTTAAATTTTGATAAGGCTGTCCCATTAACTAATGG
AACTAGGCCTTGGTCTCAACCTATCCCCCAAAGTATCCTCGTCAAATTCT
TGATTATTATCACACACCAAAATTTACAAATATTTAGTCCAACTACTTGT
CTCTCAAGCAGAAATGTCCGACAAGTCGTTCTGGTGTTTCTCCTTTTGAA
GTGAAAACCGACATGCATCAATTGCATCTTCAATTGACAAGAAAACCGAA
TCCTTCCCAATGACGTCGATGAACTTTGACAGTATCATTTTATCCATAAC
CCCAATCCTGGGATTTATTAATTTCATCTTAATAGATTTTGCTTCCAAAA
TTCTGAGTATTTCTCTAAATGCGGCAATTCCTGTCATGTCTATTGTTGAA
ACTCCTGACAAATCTAGTAAAACATGCTCAATAACATCCGGCTTGGAATT
TGATAAGACCTGTTCATCTCGGATCCATCTCAAAACCCTTTCTCTAATGT
AATTGCAATTTGCAAAGTAAATAGGGGAACCAAGTTGCAGAATTAGGATT
CCTGGGAACCCTTGTGCATGCTGATACTGCTCTGTATCCAGGTACAGATT
CGAGTCTGAGATTTTTCCAAGCTTGCAAGTAGCAGGCCTTGCCACAT
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