CN188065

Overview
NameCN188065
Unique NameCN188065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188065 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.681e-73
Identity = 139/214 (64.95%), Postives = 164/214 (76.64%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCT-PGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL 715
            EL   A  I   GKGILAADES GT+GKRL+ I +EN + +RR  R+LLF T P   +++ G+I F ET+YQKT  G PFV ++K+ G+L GIKVDKG V LAGTNGE TTQGLDGLA+RC +Y + GA FAKWR VLKI PN PS+L+I ENAN LARYA ICQ+NGLVPIVEPEIL DG HD+  C  +TE+VLAA YKAL+DHHV LEGTL
Sbjct:   15 ELADIAQRIVASGKGILAADESVGTMGKRLTQIGLENTDEHRRFYRQLLFTTDPSIKEHIGGIIFFHETMYQKTDGGVPFVKLVKDNGILVGIKVDKGVVPLAGTNGEGTTQGLDGLAERCAQYKKDGADFAKWRCVLKISPNTPSRLSIVENANVLARYATICQQNGLVPIVEPEILPDGDHDLKTCQYITEKVLAATYKALSDHHVYLEGTL 228          
BLAST of CN188065 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 272.707 bits (696), Expect = 1.362e-72
Identity = 139/209 (66.51%), Postives = 161/209 (77.03%), Query Frame = 2
Query:   92 AAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL 715
            A  I   GKGILAADES GT+G RL  INVEN E NRRA RE+LF +  ++ + + GVILF ETLYQK ++GKPF  ++KE G++ GIK+D GT  LAGTNGETT QGLD LA+RC +Y + GA F KWRAVLKI    PSQLAI ENAN LARYA ICQ+NGLVPIVEPE+L DG HD+ +C  VTE+VLAA YKALNDHHV LEGTL
Sbjct:   20 AQRIVASGKGILAADESVGTMGNRLQRINVENTEENRRAFREILFSSDASISKSIGGVILFHETLYQKDSSGKPFPAIIKEKGMVVGIKLDAGTAPLAGTNGETTIQGLDKLAERCAQYKKDGADFGKWRAVLKISSTTPSQLAIQENANTLARYASICQQNGLVPIVEPEVLPDGDHDLQRCQYVTEKVLAAVYKALNDHHVYLEGTL 228          
BLAST of CN188065 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 3.034e-72
Identity = 139/214 (64.95%), Postives = 163/214 (76.17%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL 715
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQK   G PF  ++K+ G++ GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAACYKAL+DHHV LEGTL
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFTADERMDKCIGGVIFFHETLYQKADDGTPFAKMIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISETSPSELAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAACYKALSDHHVYLEGTL 228          
BLAST of CN188065 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.355e-71
Identity = 138/214 (64.49%), Postives = 162/214 (75.70%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL 715
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQ T  G  F  ++K+ G++ GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAACYKAL+DHHV LEGTL
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFSADERIDKCIGGVIFFHETLYQNTDDGTNFAQLIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISDTTPSELAIMENANVLARYASICQQNGIVPIVEPEILPDGEHDLKRCQYVTEKVLAACYKALSDHHVYLEGTL 228          
BLAST of CN188065 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 4.382e-71
Identity = 141/214 (65.89%), Postives = 159/214 (74.30%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL 715
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+DHHV LEGTL
Sbjct:   15 ELADIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSSLAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTL 228          
BLAST of CN188065 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 7.474e-71
Identity = 141/214 (65.89%), Postives = 159/214 (74.30%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL 715
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+DHHV LEGTL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTL 228          
BLAST of CN188065 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 9.761e-71
Identity = 140/214 (65.42%), Postives = 159/214 (74.30%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL 715
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+DHH+ LEGTL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTL 228          
BLAST of CN188065 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 266.544 bits (680), Expect = 9.761e-71
Identity = 140/214 (65.42%), Postives = 159/214 (74.30%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL 715
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+DHH+ LEGTL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTL 228          
BLAST of CN188065 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 9.761e-71
Identity = 140/214 (65.42%), Postives = 159/214 (74.30%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL 715
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+VLAA YKAL+DHH+ LEGTL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTL 228          
BLAST of CN188065 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 4.845e-70
Identity = 139/214 (64.95%), Postives = 158/214 (73.83%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTL 715
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPI EPEIL DG HD+ +C  VTE+VLAA YKAL+DHH+ LEGTL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIVGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIAEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTL 228          
The following BLAST results are available for this feature:
BLAST of CN188065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF1_LAMJA4.681e-7364.95Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOB_CHICK1.362e-7266.51Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDOC_CARAU3.034e-7264.95Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE3.355e-7164.49Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDOA_RAT4.382e-7165.89Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALDOA_MOUSE7.474e-7165.89Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_RABIT9.761e-7165.42Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_PONAB9.761e-7165.42Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_HUMAN9.761e-7165.42Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOA_PANTR4.845e-7064.95Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005H04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188065 ID=CN188065; Name=CN188065; organism=Citrus sinensis; type=EST; length=716bp
AGTCTCCCTCTAACAAAACAAATTTTCTATCTTCAAGTCGATCACCATGT
CTTGCTTCAAGGGCAAATACGCCGATGAGCTCATTAAAAATGCTGCCTAC
ATTGGCACCCCTGGAAAGGGTATCCTTGCTGCTGATGAGTCAACAGGCAC
CATTGGCAAGCGTCTATCCAGCATCAATGTTGAGAATGTTGAGTCAAACA
GGCGTGCTCTCCGCGAGCTCCTTTTCTGCACTCCCGGTGCCCTTCAGTAC
CTCAGTGGTGTCATCCTCTTCGAGGAGACCCTCTACCAGAAGACTGCTGC
TGGCAAGCCCTTTGTTGATGTCTTGAAGGAGGGTGGAGTCCTCCCTGGAA
TTAAGGTTGACAAGGGTACTGTTGAGCTTGCTGGTACCAATGGTGAGACC
ACCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGCCAGAAATACTATGA
AGCTGGTGCTCGTTTTGCCAAATGGCGTGCTGTTCTTAAGATTGGCCCTA
ATGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCAATGGCCTGGCCCGA
TATGCTATCATCTGCCAGGAGAATGGCCTTGTTCCCATTGTTGAACCTGA
GATCCTTGTTGACGGTCCCCATGACATCAACAAGTGTGCTGATGTGACCG
AGCGTGTTCTTGCTGCATGCTACAAGGCTCTGAATGACCACCATGTCCTT
CTTGAGGGTACCCTTT
back to top