CN188060

Overview
NameCN188060
Unique NameCN188060
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.286e-27
Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  253 TVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 1.695e-27
Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  253 TVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          

HSP 2 Score: 25.0238 bits (53), Expect = 1.695e-27
Identity = 12/19 (63.16%), Postives = 13/19 (68.42%), Query Frame = -2
Query:  636 PNMVTPGSEAP-KVTPDVI 689
            PNMVTPG   P K TP+ I
Sbjct:  231 PNMVTPGHACPIKYTPEEI 249          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.207e-27
Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  253 TVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          

HSP 2 Score: 25.0238 bits (53), Expect = 2.207e-27
Identity = 12/19 (63.16%), Postives = 13/19 (68.42%), Query Frame = -2
Query:  636 PNMVTPGSEAP-KVTPDVI 689
            PNMVTPG   P K TP+ I
Sbjct:  231 PNMVTPGHACPIKYTPEEI 249          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.868e-27
Identity = 63/115 (54.78%), Postives = 77/115 (66.96%), Query Frame = -3
Query:  290 AEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 634
            A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  288 ASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          

HSP 2 Score: 23.483 bits (49), Expect = 2.868e-27
Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = -2
Query:  636 PNMVTPGSEA-PKVTPDVI 689
            P+MVTPG+EA  + TP+ +
Sbjct:  269 PSMVTPGAEATDRATPEQV 287          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 117.087 bits (292), Expect = 4.869e-27
Identity = 63/113 (55.75%), Postives = 79/113 (69.91%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY-KGDAQLGEGAAESLHVKDYKY 625
            TV+AL+RT+PAAV  V FLSGGQSEEEAT NL+A+N +   +PW+L+FS+GRALQ S L+AWAGK+EN+   Q   L R KAN +A  G Y  G A  G G   SL V ++ Y
Sbjct:  252 TVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVAGSAGAGSG---SLFVANHAY 361          

HSP 2 Score: 25.0238 bits (53), Expect = 4.869e-27
Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = -2
Query:  636 PNMVTPGSEAPKVTPDVI 689
            PNMVT G  A K TP+ I
Sbjct:  231 PNMVTAGQSAKKNTPEEI 248          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 6.330e-27
Identity = 62/115 (53.91%), Postives = 80/115 (69.57%), Query Frame = -3
Query:  290 AEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 634
            +++T++ L R +P AVP ++FLSGGQSE EAT+NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  277 SDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          

HSP 2 Score: 21.9422 bits (45), Expect = 6.330e-27
Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = -2
Query:  636 PNMVTPGSEA-PKVTPDVI 689
            P+MVTPG+E   + TP+ +
Sbjct:  258 PSMVTPGAECKDRATPEQV 276          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.074e-26
Identity = 66/122 (54.10%), Postives = 79/122 (64.75%), Query Frame = -3
Query:  290 KLHRT*FAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 655
            K   T  AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E A + L VK Y Y
Sbjct:  238 KASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGE-SEEAKKELFVKGYSY 356          

HSP 2 Score: 20.7866 bits (42), Expect = 1.074e-26
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = -2
Query:  660 PNMVTPGSEA 689
            P+MVTPG+E+
Sbjct:  226 PSMVTPGAES 235          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.398e-26
Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+PA+VP + FLSGGQSEEEA+ +LNA+NQ+   +PW L+FS+GRALQ S L AW GK+ N    Q  F+ R K N  A+ G YK      + + +SL+   Y Y
Sbjct:  253 TVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          

HSP 2 Score: 24.2534 bits (51), Expect = 1.398e-26
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = -2
Query:  654 PNMVTPGSEAPK 689
            PNMVTPG   PK
Sbjct:  231 PNMVTPGHSCPK 242          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26
Identity = 61/112 (54.46%), Postives = 71/112 (63.39%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y      G  + +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 1.819e-26
Identity = 62/112 (55.36%), Postives = 71/112 (63.39%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV  L RT+PAAVP + FLSGGQSEEEA+ NLNAMNQ    KPW L+FS+GRALQ S L AW GK EN + AQ AF  R + NS A  G Y    +    A +SL    Y Y
Sbjct:  253 TVTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          

HSP 2 Score: 21.1718 bits (43), Expect = 1.819e-26
Identity = 8/12 (66.67%), Postives = 8/12 (66.67%), Query Frame = -2
Query:  654 PNMVTPGSEAPK 689
            PNMVT G   PK
Sbjct:  231 PNMVTAGHSCPK 242          
The following BLAST results are available for this feature:
BLAST of CN188060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOA_HUMAN1.286e-2755.36Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOC_MACFA1.695e-2750.89Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN2.207e-2750.89Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALFC1_ARATH2.868e-2754.78Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALF_DROME4.869e-2755.75Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALFC_ORYSJ6.330e-2753.91Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_PEA1.074e-2654.10Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALDOB_SPAAU1.398e-2650.00Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOB_BOVIN1.422e-2654.46Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALDOB_CHICK1.819e-2655.36Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188060 ID=CN188060; Name=CN188060; organism=Citrus sinensis; type=EST; length=699bp
CCCCTTTTTTTAGCACAGAAACATTATCAATTATGTGACAAAATCACAGA
AATTCAGTGCCATTAGGGGAAAGGAAAAAAAAAGAAAAACAAAAACAAAA
GCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGT
TCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAAAGCTCTAAAACTAT
GAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAA
GTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGT
CCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCACCC
TTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAA
AGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGA
GAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTGACCATGGC
TTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTC
CTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCA
TAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAAATCACGTCCGGTGT
AACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGGCTTCAAAAG
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