CN188060

Overview
NameCN188060
Unique NameCN188060
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.819e-26
Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            T+ AL+RT+P AVP + FLSGGQSEE+A+ +LNA+N+L   KPW+L+FS+GRALQ S LKAW GK+EN++ AQ   + R K N +A+ G YK     G  A ESL V ++ Y
Sbjct:  253 TLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYK-PTGTGAAAGESLFVANHAY 363          

HSP 2 Score: 21.557 bits (44), Expect = 1.819e-26
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = -2
Query:  648 PNMVTPGSEAPKVT 689
            PNMVT G+ AP  T
Sbjct:  231 PNMVTVGTAAPAST 244          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.426e-26
Identity = 59/112 (52.68%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+P+AVP + FLSGGQSEE+A+ NLNA+NQL  ++PW+LSFS+GRALQ S LKAWAG   N+  A+  F  R   N  A  G Y      G  A+ESL + ++ Y
Sbjct:  253 TVTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.174e-26
Identity = 57/112 (50.89%), Postives = 74/112 (66.07%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N     +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A LG Y+G       A +SL+V ++ Y
Sbjct:   26 TVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          

HSP 2 Score: 23.8682 bits (50), Expect = 3.174e-26
Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = -2
Query:  636 PNMVTPGSEAP-KVTPDVI 689
            PNMVTPG   P K +P+ I
Sbjct:    4 PNMVTPGHSCPTKYSPEEI 22          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.006e-26
Identity = 61/115 (53.04%), Postives = 75/115 (65.22%), Query Frame = -3
Query:  290 AEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 634
            A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV  AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  287 AAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 398          

HSP 2 Score: 22.3274 bits (46), Expect = 4.006e-26
Identity = 9/19 (47.37%), Postives = 15/19 (78.95%), Query Frame = -2
Query:  636 PNMVTPGSEA-PKVTPDVI 689
            P+MVTPG+E+  + TP+ +
Sbjct:  268 PSMVTPGAESKDRATPEQV 286          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 5.223e-26
Identity = 58/112 (51.79%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL+V ++ Y
Sbjct:  253 TVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGD-GGAAAQSLYVANHAY 363          

HSP 2 Score: 23.483 bits (49), Expect = 5.223e-26
Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = -2
Query:  636 PNMVTPGSEAP-KVTPDVI 689
            PNMVTPG   P K +P+ I
Sbjct:  231 PNMVTPGHACPIKYSPEEI 249          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.404e-26
Identity = 64/112 (57.14%), Postives = 78/112 (69.64%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TVR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  249 TVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 7.058e-26
Identity = 59/112 (52.68%), Postives = 70/112 (62.50%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N+    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  A +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 364          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 114.39 bits (285), Expect = 8.848e-26
Identity = 57/112 (50.89%), Postives = 76/112 (67.86%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL++ ++ Y
Sbjct:  253 TVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGD-GGAAAQSLYIANHAY 363          

HSP 2 Score: 23.483 bits (49), Expect = 8.848e-26
Identity = 11/19 (57.89%), Postives = 13/19 (68.42%), Query Frame = -2
Query:  636 PNMVTPGSEAP-KVTPDVI 689
            PNMVTPG   P K +P+ I
Sbjct:  231 PNMVTPGHACPIKYSPEEI 249          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.218e-26
Identity = 60/112 (53.57%), Postives = 70/112 (62.50%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y         + +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.150e-25
Identity = 60/115 (52.17%), Postives = 77/115 (66.96%), Query Frame = -3
Query:  290 AEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 634
            A+ T+  L+R +P AVP ++FLSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ S L+ W GK E ++ +Q A LVR KANS A LG Y  + +  E A + + VK Y Y
Sbjct:  280 ADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQ--SPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGE-NEDAKKGMFVKGYTY 391          

HSP 2 Score: 21.557 bits (44), Expect = 1.150e-25
Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = -2
Query:  636 PNMVTPGSE-APKVTPDVI 689
            P+MVTPG+E   K +P+ +
Sbjct:  261 PSMVTPGAEHKNKASPETV 279          
The following BLAST results are available for this feature:
BLAST of CN188060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF1_LAMJA1.819e-2653.57Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALF2_LAMJA2.426e-2652.68Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOC_CHICK3.174e-2650.89Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALFC2_ARATH4.006e-2653.04Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALDOC_RAT5.223e-2651.79Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALF2_PLABA5.404e-2657.14Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDOB_MOUSE7.058e-2652.68Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALDOC_MOUSE8.848e-2650.89Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_SHEEP9.218e-2653.57Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALFC3_ARATH1.150e-2552.17Probable fructose-bisphosphate aldolase 3, chlorop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188060 ID=CN188060; Name=CN188060; organism=Citrus sinensis; type=EST; length=699bp
CCCCTTTTTTTAGCACAGAAACATTATCAATTATGTGACAAAATCACAGA
AATTCAGTGCCATTAGGGGAAAGGAAAAAAAAAGAAAAACAAAAACAAAA
GCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGT
TCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAAAGCTCTAAAACTAT
GAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAA
GTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGT
CCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCACCC
TTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAA
AGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGA
GAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTGACCATGGC
TTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTC
CTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCA
TAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAAATCACGTCCGGTGT
AACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGGCTTCAAAAG
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