CN188060

Overview
NameCN188060
Unique NameCN188060
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.204e-25
Identity = 59/112 (52.68%), Postives = 69/112 (61.61%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R   N +A  G Y      G  + +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.572e-25
Identity = 61/114 (53.51%), Postives = 79/114 (69.30%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGD--AQLGEGAAESLHVKDYKY 625
            TVRALQRT+P AVP + FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK+ENV  AQ   L   KAN  A +G ++G+    LG+   +SL V ++ Y
Sbjct:  253 TVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGD---KSLFVANHAY 363          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25
Identity = 59/112 (52.68%), Postives = 69/112 (61.61%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 3.503e-25
Identity = 59/112 (52.68%), Postives = 69/112 (61.61%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24
Identity = 57/112 (50.89%), Postives = 70/112 (62.50%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL RT+PAAVP++ FLSGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  253 TVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.092e-24
Identity = 60/109 (55.05%), Postives = 72/109 (66.06%), Query Frame = -3
Query:  329 KLHRT*FAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 655
            K   T  AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  232 KASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          

HSP 2 Score: 20.7866 bits (42), Expect = 2.092e-24
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = -2
Query:  660 PNMVTPGSEA 689
            P+MVTPG+E+
Sbjct:  220 PSMVTPGAES 229          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.472e-23
Identity = 59/112 (52.68%), Postives = 73/112 (65.18%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N     KPW+L+FS+GRALQ S L AW G +EN + A   FL R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  253 TVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22
Identity = 56/112 (50.00%), Postives = 71/112 (63.39%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+P AV  V FLSGGQSEEEA+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+ R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  253 TVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.110e-22
Identity = 55/112 (49.11%), Postives = 69/112 (61.61%), Query Frame = -3
Query:  290 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 625
            TV AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  253 TVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          

HSP 2 Score: 21.557 bits (44), Expect = 3.110e-22
Identity = 8/11 (72.73%), Postives = 8/11 (72.73%), Query Frame = -2
Query:  657 PNMVTPGSEAP 689
            PNMVTPG   P
Sbjct:  231 PNMVTPGHGCP 241          
BLAST of CN188060 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 5.615e-21
Identity = 51/101 (50.50%), Postives = 63/101 (62.38%), Query Frame = -3
Query:  353 KLHRT*FAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY 655
            K H    AE+TV+ L R +P A+P V FLSGG SE  A+  LNAMN     +PW L+FS+ RALQ S +K W GKE  V+  + AF+ R K NS A LG Y
Sbjct:  253 KGHAEQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKY 353          

HSP 2 Score: 20.7866 bits (42), Expect = 5.615e-21
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = -2
Query:  660 PNMVTPGSEA 689
            PNMV PG+E+
Sbjct:  241 PNMVVPGAES 250          
The following BLAST results are available for this feature:
BLAST of CN188060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOB_RABIT1.204e-2552.68Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]
ALF_SCHMA1.572e-2553.51Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOB_HUMAN2.682e-2552.68Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALDOB_PONAB3.503e-2552.68Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALDOB_RAT1.331e-2450.89Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALFC2_PEA2.092e-2455.05Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALDOC_CARAU1.472e-2352.68Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE1.627e-2250.00Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDCA_DANRE3.110e-2249.11Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF_TRYBB5.615e-2150.50Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188060 ID=CN188060; Name=CN188060; organism=Citrus sinensis; type=EST; length=699bp
CCCCTTTTTTTAGCACAGAAACATTATCAATTATGTGACAAAATCACAGA
AATTCAGTGCCATTAGGGGAAAGGAAAAAAAAAGAAAAACAAAAACAAAA
GCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGT
TCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAAAGCTCTAAAACTAT
GAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAA
GTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGT
CCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCACCC
TTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAA
AGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGA
GAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTGACCATGGC
TTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCTC
CTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGCA
TAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAAATCACGTCCGGTGT
AACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGGCTTCAAAAG
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