CN188058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CAN2_CHICK (Calpain-2 catalytic subunit OS=Gallus gallus GN=CAPN2 PE=2 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12 Identity = 35/130 (26.92%), Postives = 75/130 (57.69%), Query Frame = -1 Query: 206 NQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 595 + FS+ T ++++ N + K+G KEF ++ +Q ++ ++ ++D DRSG ++S E+R AL + GF +S + ++V +F + I++DN + C + ++ L + F++ DT +G+ N++ Sbjct: 569 SDGFSIETCKIMVDLLDNDGSGKLGLKEFHTLWTKIQKYQKIYREIDVDRSGTMNSYEMRRALEAAGFKLSCQLHQIIVARF---ADEDLIIDFDNCVRCLIRLETLYKMFRKLDTEKTGTIELNLINWL 695
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CAN1_RABIT (Calpain-1 catalytic subunit (Fragment) OS=Oryctolagus cuniculus GN=CAPN1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11 Identity = 47/161 (29.19%), Postives = 84/161 (52.17%), Query Frame = -1 Query: 224 FVACF-QLADRDNSGLIDDKELQGALSSYN--------QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATF 679 F A F QLA D I +ELQ L+ + FS+ + R ++ K+G EF +++ ++N+ A+F K D D+SG + + E+R A+ S GF ++ + +L++T++ + A+++DNF+ C + ++ + FK DT G TF Sbjct: 135 FKALFRQLAGEDLE--ISVRELQTILNRITSKHKDLRTKGFSMESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLAIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSE---PDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTF 290
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CAN1_PIG (Calpain-1 catalytic subunit OS=Sus scrofa GN=CAPN1 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 35/123 (28.46%), Postives = 70/123 (56.91%), Query Frame = -1 Query: 224 QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATF 592 + FSL + R ++ K+G EF +++ ++N+ ++F K D D+SG + + E+R A+ S GF ++ + +L++T++ + A+++DNF+ C + ++ + FK DT G TF Sbjct: 583 KGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLFELIITRYSE---PDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTF 702
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CAN1_MACFA (Calpain-1 catalytic subunit OS=Macaca fascicularis GN=CAPN1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 47/161 (29.19%), Postives = 84/161 (52.17%), Query Frame = -1 Query: 224 FVACF-QLADRDNSGLIDDKELQGALSSY--------NQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATF 679 F A F QLA D I KEL+ L+ + FSL + R ++ K+G EF +++ ++N+ ++F K D D+SG + + E+R A+ S GF ++ + +L++T++ + A+++DNF+ C + ++ + FK DT G TF Sbjct: 547 FKALFRQLAGEDME--ISVKELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSE---PDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTF 702
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CAN1_HUMAN (Calpain-1 catalytic subunit OS=Homo sapiens GN=CAPN1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 47/161 (29.19%), Postives = 84/161 (52.17%), Query Frame = -1 Query: 224 FVACF-QLADRDNSGLIDDKELQGALSSY--------NQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATF 679 F A F QLA D I KEL+ L+ + FSL + R ++ K+G EF +++ ++N+ ++F K D D+SG + + E+R A+ S GF ++ + +L++T++ + A+++DNF+ C + ++ + FK DT G TF Sbjct: 547 FKALFRQLAGEDME--ISVKELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSE---PDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTF 702
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CAN1_PONAB (Calpain-1 catalytic subunit OS=Pongo abelii GN=CAPN1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11 Identity = 35/123 (28.46%), Postives = 70/123 (56.91%), Query Frame = -1 Query: 224 QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATF 592 + FSL + R ++ K+G EF +++ ++N+ ++F K D D+SG + + E+R A+ S GF ++ + +L++T++ + A+++DNF+ C + ++ + FK DT G TF Sbjct: 583 KGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELIITRYSE---PDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTF 702
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CAN11_RAT (Calpain 11 OS=Rattus norvegicus GN=Capn11 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11 Identity = 43/149 (28.86%), Postives = 81/149 (54.36%), Query Frame = -1 Query: 233 LADRDNS-GLIDDKELQGALSSYNQSF-----SLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGS 661 LA+RD+ + D ++L +SS +SF SL R ++ ++ K+G EF ++ ++ W +F++ D+DRSG ++S E+R A+ G ++ V +++V ++ + +++DNFI C L +K + F DT +GS Sbjct: 556 LANRDSQVDMYDLQKLLNKMSSKVKSFKSKGFSLDVCRRMVNLMDKDDSGKLGLHEFHILWKKIKKWMEIFKECDQDRSGNLNSYEMRLAIEKAGIRMNNRVTEVVVARY---ADANMIVDFDNFINCFLRLKAMFAFFLSMDTKKTGS 701
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CPNS2_HUMAN (Calpain small subunit 2 OS=Homo sapiens GN=CAPNS2 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11 Identity = 32/117 (27.35%), Postives = 66/117 (56.41%), Query Frame = -1 Query: 236 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSG 586 FSL T R ++ + K+G +EF ++++++ W+ ++++ DRD SG + S++LR AL + GF ++ + ++V ++ G ++++NFI C + + + FK D G Sbjct: 119 FSLDTCRSIVSVMDSDTTGKLGFEEFKYLWNNIKKWQCVYKQYDRDHSGSLGSSQLRGALQAAGFQLNEQLYQMIVRRYANEDGD---MDFNNFISCLVRLDAMFRAFKSLDRDRDG 232
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CPNS1_BOVIN (Calpain small subunit 1 OS=Bos taurus GN=CAPNS1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11 Identity = 32/127 (25.20%), Postives = 70/127 (55.12%), Query Frame = -1 Query: 206 FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 586 F + T R ++ + K+G +EF ++++++ W+A++++ D DRSG I S+EL A + GF ++ + ++++ ++ GG +++DNFI C + + + FK D +G + ++ Sbjct: 134 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAVYKQFDVDRSGTIGSSELPGAFEAAGFRLNEHLYNMIIRRYSDEGGN---MDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWL 257 The following BLAST results are available for this feature:
BLAST of CN188058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188058 ID=CN188058; Name=CN188058; organism=Citrus sinensis; type=EST; length=700bpback to top |