CK939147

Overview
NameCK939147
Unique NameCK939147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK939147 vs. ExPASy Swiss-Prot
Match: PSBL_EMIHU (Photosystem II reaction center protein L OS=Emiliania huxleyi GN=psbL PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 1 
Query:   70 MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 183
            M+  NPN+Q VELNRTSLYWGLLL+FVLAVLFS+YFFN
Sbjct:    1 MSAPNPNKQPVELNRTSLYWGLLLMFVLAVLFSSYFFN 38
The following BLAST results are available for this feature:
BLAST of CK939147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
PSBL_EMIHU7.883e-1181.58Photosystem II reaction center protein L OS=Emilia... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004433_F07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IIF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939147 ID=CK939147; Name=CK939147; organism=Citrus sinensis; type=EST; length=677bp
TTTTTTTTTTGGGGTCAATATCAGCAATGCAGTTCATCCAACGCTAAACC
TAATCGGAATTAGAGAGCTATGACACAATCAAACCCAAACGAACAAAATG
TTGAATTGAACCGTACCAGTCTCTACTGGGGGTTATTGCTCATTTTTGTA
CTTGCTGTTTTATTTTCCAATTACTTCTTCAATTAAGAGAAGAAAAGAGA
ATAGTATAAGAATCCAAAATAGTAGGAATTCTCTTATCCCATTCGGAAGA
AGCGCATCTTATAATTATCTATGACTGTTTATGTCTCTAGCGTGACCACT
TGCAAAAATGTGCAAAAATGTGGAGGGAAGCGGGATAAATGGCCGATACT
ACTGGAAGGATTCCCCTTTGGATAATAGGAACTGTAACTGGTATTCTTGT
GATCGGTTTAATAGGCATTTTCTTTTATGGTTCATATTCCGGATTAGGTT
CGTCCTTGTAGTAATCGAATGAACTGCGTTATAGACATAAAAGCGTAAGA
ACTCAAGGTACCCTGTCGTTCCCGTGCTTTGTCTGATTCGAGGGGTAGGG
CCAGGGCCCCTTGAGTTCTTAATAAACATAATATTTTGGTTTGCTCGTAT
AAATGGAAAAAACGGATCGCTTTTTCCGATGCTTCAAAAAAATCCATTTC
ATTTTTTTCTGATTTCTGATGATTTTT
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