CX675616

Overview
NameCX675616
Unique NameCX675616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_BORPD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metE PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.278e-22
Identity = 68/173 (39.31%), Postives = 99/173 (57.23%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRK----DEGFFSANAAAQASRKSS 508
            F  AYA L    + + +LV TYF  +  +   T  +L  V     DL+R    L+ + +G   G+ L AG++DGRNIW  DL A+L+ L     ++G ++L ++ SCSLLH  VDL NE  LD   +SWL+FAAQK+ E+  L +ALA  +    DE   +  AA +A R+S+
Sbjct:  230 FRTAYARLAD--APVKLLVATYFGGLN-DNLATALALP-VAGLHVDLIRAPGQLQDVAAGLRPGQVLSAGIIDGRNIWRTDLDAALAALAPARQLLG-ERLWLAPSCSLLHVPVDLANETDLDAELRSWLSFAAQKLDELGLLGRALADARAPGVDEALAAQRAALRARRQSA 397          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_ACIF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metE PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.278e-22
Identity = 71/157 (45.22%), Postives = 92/157 (58.60%), Query Frame = 2
Query:   50 VLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDE--GFFSANAAAQASRKSSPR 514
            VL+ TYF  V A+  + L +L  V     DL R  + L    S +PA K L  GVVDGRN+W  DL A+L +L+     +G D+L V+ SCSLLHT VDL  E +LD   KSWL+F+ QK+ EV  + +AL    +      +A  AA ASRKSSPR
Sbjct:  262 VLLATYFDSV-ADHAKALKALP-VAGVHLDLRRAPQQLNSFLSDYPADKVLSLGVVDGRNVWRADLDAALELLQPAHKQLG-DRLWVAPSCSLLHTPVDLEQETELDAELKSWLSFSVQKLDEVAIIGRALKEGVESVAQELAAARAAVASRKSSPR 415          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_ACIF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metE PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.278e-22
Identity = 71/157 (45.22%), Postives = 92/157 (58.60%), Query Frame = 2
Query:   50 VLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDE--GFFSANAAAQASRKSSPR 514
            VL+ TYF  V A+  + L +L  V     DL R  + L    S +PA K L  GVVDGRN+W  DL A+L +L+     +G D+L V+ SCSLLHT VDL  E +LD   KSWL+F+ QK+ EV  + +AL    +      +A  AA ASRKSSPR
Sbjct:  262 VLLATYFDSV-ADHAKALKALP-VAGVHLDLRRAPQQLNSFLSDYPADKVLSLGVVDGRNVWRADLDAALELLQPAHKQLG-DRLWVAPSCSLLHTPVDLEQETELDAELKSWLSFSVQKLDEVAIIGRALKEGVESVAQELAAARAAVASRKSSPR 415          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_BURA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=metE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.587e-22
Identity = 69/170 (40.59%), Postives = 95/170 (55.88%), Query Frame = 2
Query:   11 AYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDE--GFFSANAAAQASRKSSPR 514
            AYA LE+    + VL+ TYF  +      TL +   V     D +     ++ +    PA + L  G ++GRNIW  DL A+L  L  L   +G ++L ++ SCSLLH  VDL +E KLD   +SWLAFA QK+ E+N LA AL   +D+     +ANAAA  SR+ SPR
Sbjct:  231 AYAALETRR--IKVLLATYFGALGDNL--TLAASLPVDGLHVDAINARDEVDALVRELPADRVLSVGAINGRNIWKTDLNATLDWLEPLAKQLG-ERLWIAPSCSLLHVPVDLASEQKLDPEIRSWLAFALQKLDELNVLATALNEGRDKVADALAANAAAIDSRRRSPR 395          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.297e-22
Identity = 70/173 (40.46%), Postives = 99/173 (57.23%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL--AGRKDEGFFSANAAAQASRKSSPR 514
            F  AYA L    +G  +L+ TYF D  A+  Q   +L  V  +  DLVR  + L   ++  PA   L  GV+DGRNIW  DL   L  LR ++  +G ++L ++ SCSLLH  V L +E +LD   KSWLAFA +K+ E++ L +AL  +        +A+ AAQASR++S R
Sbjct:  220 FDTAYAALRE--AGPKLLLATYF-DTAADHAQRAAALP-VDGFHIDLVRAPEQLAAWQAALPAHAVLSLGVIDGRNIWRTDLRRVLDTLRPVQAALG-ERLWLAPSCSLLHVPVSLAHEVRLDVELKSWLAFATEKLDELSVLGRALNQSDAVVAEALAASDAAQASRRASRR 387          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_COXB2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuG_Q212) GN=metE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.297e-22
Identity = 68/159 (42.77%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   44 LNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL-AGRKDEGF-FSANAAAQASRKSSPR 514
            L  L+ TYF  +      +LT    V     D  R    L+ + S  PA K L  G+VDGRNIW NDL  SL++L  ++  +G D+L V+ SCSLLH  +DL  ENKLD   KSW AFA QKV E   L + L  GR+  G     N     SRK+S R
Sbjct:  235 LKCLLATYFGSLDDNL--SLTCQLPVDGLHIDYCRAPDQLDSVLSQLPAEKILSVGIVDGRNIWCNDLNRSLTLLENIQSSLG-DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKR 390          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_BURCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=metE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.297e-22
Identity = 69/173 (39.88%), Postives = 95/173 (54.91%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDE--GFFSANAAAQASRKSSPR 514
            F  AYA LE+    + +L+ TYF  +      TL +   V     D +     ++ +    PA + L  G ++GRNIW  DL A+L  L  L   +G D+L ++ SCSLLH  VDL +E KLD   +SWLAFA QK+ E+  LA AL   +D+     +ANAAA  SR+ SPR
Sbjct:  228 FRTAYAALETRR--IKLLLATYFGQLQDNL--TLAASLPVDGLHIDAINARDEVDALVRELPAERVLSVGAINGRNIWKTDLNAALDWLEPLAKQLG-DRLWLAPSCSLLHVPVDLASEEKLDAEIRSWLAFALQKLDELKVLATALNEGRDKVADALAANAAAIDSRRRSPR 395          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_BURCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=metE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.297e-22
Identity = 69/173 (39.88%), Postives = 95/173 (54.91%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDE--GFFSANAAAQASRKSSPR 514
            F  AYA LE+    + +L+ TYF  +      TL +   V     D +     ++ +    PA + L  G ++GRNIW  DL A+L  L  L   +G D+L ++ SCSLLH  VDL +E KLD   +SWLAFA QK+ E+  LA AL   +D+     +ANAAA  SR+ SPR
Sbjct:  228 FRTAYAALETRR--IKLLLATYFGQLQDNL--TLAASLPVDGLHIDAINARDEVDALVRELPAERVLSVGAINGRNIWKTDLNAALDWLEPLAKQLG-DRLWLAPSCSLLHVPVDLASEEKLDAEIRSWLAFALQKLDELKVLATALNEGRDKVADALAANAAAIDSRRRSPR 395          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_STRSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus sanguinis (strain SK36) GN=metE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 65/160 (40.62%), Postives = 92/160 (57.50%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNAL--------AKALAGRKD 457
            F + Y +L +   GL VLV+TYF DV  + +  L  L  V A G D V G KTLEL+K GFPA K L+AG+V+G+NIW N+   SL+VL  +      + +V+++SCSLLH      NE + +    +  AFA +K+ E+  L        A+ALA  K+
Sbjct:  221 FLDLYKKLLADKKGLEVLVQTYFGDV-RDIYADLVQLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYAGIVNGKNIWRNNYEKSLAVLEQIPA----ENIVLTSSCSLLHVPFTTANE-EFEPAILNHFAFAVEKLDEIRDLDAIRNGGGAEALAANKE 373          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_STRGC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 64/160 (40.00%), Postives = 92/160 (57.50%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNAL--------AKALAGRKD 457
            F + Y +L +   GL VL++TYF DV  + +  L  L  V A G D V G KTLEL+K GFPA K L+AG+V+G+NIW N+   SL+VL  +      + +V+++SCSLLH      NE + +    +  AFA +K+ E+  L        A+ALA  K+
Sbjct:  221 FLDLYKKLLADKKGLEVLIQTYFGDV-RDIYSDLVQLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYAGIVNGKNIWRNNYEKSLAVLEQIPA----ENIVLTSSCSLLHVPFTTANE-EFEPAILNHFAFAVEKLDEIRDLDAIRNGQGAEALAANKE 373          
The following BLAST results are available for this feature:
BLAST of CX675616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
METE_BORPD4.278e-2239.315-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF54.278e-2245.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF24.278e-2245.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURA45.587e-2240.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEU7.297e-2240.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB27.297e-2242.775-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCH7.297e-2239.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCA7.297e-2239.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSV9.530e-2240.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGC9.530e-2240.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63E07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63E07-I13-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675616 ID=CX675616; Name=CX675616; organism=Citrus sinensis; type=EST; length=516bp
ATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTGGCTTGAATG
TTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCATTCCAGACC
CTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTTGGTTCGTGG
AACCAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTGGCAAGTACC
TCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAATGATCTTGCT
GCTTCTCTTAGTGTTCTCCGGGGGCTTGAGGGTGTTGTTGGCAAAGACAA
GCTTGTGGTCTCCACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTG
TTAATGAGAACAAACTCGACGACTAANTCAAGTCATGGCTGGCATTTGCT
GCCCAGAAAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCG
AAAGGATGAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAA
AGTCCTCCCCGAGAGT
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