CX675616

Overview
NameCX675616
Unique NameCX675616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_STAA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain JH1) GN=metE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.885e-11
Identity = 49/147 (33.33%), Postives = 77/147 (52.38%), Query Frame = 2
Query:    8 EAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTK-TLELIKSG-FPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL 442
            EAY   E       ++++TYF     +   +L     V   G D V      L+ I++G F   K L+AG++DGRN+WA+D+ A   ++  L  +   ++LV+  S SLLH  V L +E  LD      L+FA +K+ E++AL + L
Sbjct:  219 EAYDYFEKAGVAKKLVIQTYFERAHLKFLSSLP----VGGLGLDFVHDNGYNLKQIEAGDFDKSKTLYAGIIDGRNVWASDIEAKKVLIDKL--LAHTNELVIQPSSSLLHVPVSLDDET-LDTSVGEGLSFATEKLDELDALRRLL 358          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_STAA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=metE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.885e-11
Identity = 49/147 (33.33%), Postives = 77/147 (52.38%), Query Frame = 2
Query:    8 EAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTK-TLELIKSG-FPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL 442
            EAY   E       ++++TYF     +   +L     V   G D V      L+ I++G F   K L+AG++DGRN+WA+D+ A   ++  L  +   ++LV+  S SLLH  V L +E  LD      L+FA +K+ E++AL + L
Sbjct:  219 EAYDYFEKAGVAKKLVIQTYFERAHLKFLSSLP----VGGLGLDFVHDNGYNLKQIEAGDFDKSKTLYAGIIDGRNVWASDIEAKKVLIDKL--LAHTNELVIQPSSSLLHVPVSLDDET-LDTSVGEGLSFATEKLDELDALRRLL 358          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.885e-11
Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGF--DLVR-GTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL 442
            +  AY +L  T   + +L+ TYF  +    +  L  +K +   G   DL       + L+    P    L AG+++G+NIW  +L         L  +  +  L + +SCSLLH+ +DL  E+KL++  K+W AFA QK  E+  L  AL
Sbjct:  227 YLHAYDQLYQTK--IKLLLTTYFGKI----YHQLPIIKQLKVNGLHIDLTNCSDNDISLLHEQLPKKWILSAGIINGKNIWKTNL---YDWFLKLNTITHQRSLWIGSSCSLLHSPIDLNIESKLNNNIKNWFAFAIQKCSEIKLLCDAL 367          
The following BLAST results are available for this feature:
BLAST of CX675616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
METE_STAA29.885e-1133.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAA19.885e-1133.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL9.885e-1131.335-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63E07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63E07-I13-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675616 ID=CX675616; Name=CX675616; organism=Citrus sinensis; type=EST; length=516bp
ATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTGGCTTGAATG
TTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCATTCCAGACC
CTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTTGGTTCGTGG
AACCAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTGGCAAGTACC
TCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAATGATCTTGCT
GCTTCTCTTAGTGTTCTCCGGGGGCTTGAGGGTGTTGTTGGCAAAGACAA
GCTTGTGGTCTCCACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTG
TTAATGAGAACAAACTCGACGACTAANTCAAGTCATGGCTGGCATTTGCT
GCCCAGAAAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCG
AAAGGATGAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAA
AGTCCTCCCCGAGAGT
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