CX675616

Overview
NameCX675616
Unique NameCX675616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_RALEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL--AGRKDEGFFSANAAAQASRKSSPR 514
            F  AYA L    +G  +L+ TYF D  A+  Q   +L  V  +  DLVR  + L   ++  PA   L  GV+DGRNIW  DL   L  LR ++  +G ++L ++ SCSLLH  V L +E +LD   KSWLAFA +K+ E++ L +AL           +A+ AAQASR++S R
Sbjct:  220 FDTAYAALRE--AGPKLLLATYF-DTAADHAQRAAALP-VDGFHIDLVRAPEQLAAWQAALPAHAVLSLGVIDGRNIWRTDLRRVLDTLRPVQAALG-ERLWLAPSCSLLHVPVSLAHEVRLDVELKSWLAFATEKLDELSVLGRALNQGDAVVAEALAASDAAQASRRASRR 387          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_MYCA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium avium (strain 104) GN=metE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 78/171 (45.61%), Postives = 93/171 (54.39%), Query Frame = 2
Query:   14 YAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALA-GRK---DEGFFSANAAAQASRKSSPR 514
            Y +L S  +   + V TYF D P  +   L     V A G DLV G  T         AGK + AGVVDGRN+W  DLAA+L  L  L G   +  + VSTSCS LH    L  E  LDD  +SWLAF  +KV EV  LA+AL  GR+   DE   +A+ AA ASRKS PR
Sbjct:  226 YNKLGSAANRPAIYVATYFGD-PGASLAGLARTP-VEAIGVDLVYGPDTAVAAVPEL-AGKTVVAGVVDGRNVWRTDLAAALDKLTTLLGSAAR--VAVSTSCSTLHVPYSLEPETDLDDALRSWLAFGREKVAEVVTLARALRDGREAVADE--IAASNAAVASRKSDPR 389          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_COXBU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii GN=metE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 67/159 (42.14%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   44 LNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL-AGRKDEGF-FSANAAAQASRKSSPR 514
            L  L+ TYF  +      +LT    V     D  R    L+ + S  PA K L  G++DGRNIW NDL  SL++L  ++  +G D+L V+ SCSLLH  +DL  ENKLD   KSW AFA QKV E   L + L  GR+  G     N     SRK+S R
Sbjct:  235 LKCLLATYFGSLDDNL--SLTCQLPVDGLHIDYCRAPDQLDSVLSQLPAEKILSVGIIDGRNIWCNDLNRSLTLLENIQSSLG-DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKR 390          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_COXBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 67/159 (42.14%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   44 LNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL-AGRKDEGF-FSANAAAQASRKSSPR 514
            L  L+ TYF  +      +LT    V     D  R    L+ + S  PA K L  G++DGRNIW NDL  SL++L  ++  +G D+L V+ SCSLLH  +DL  ENKLD   KSW AFA QKV E   L + L  GR+  G     N     SRK+S R
Sbjct:  235 LKCLLATYFGSLDDNL--SLTCQLPVDGLHIDYCRAPDQLDSVLSQLPAEKILSVGIIDGRNIWCNDLNRSLTLLENIQSSLG-DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKR 390          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_COXBN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 67/159 (42.14%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   44 LNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL-AGRKDEGF-FSANAAAQASRKSSPR 514
            L  L+ TYF  +      +LT    V     D  R    L+ + S  PA K L  G++DGRNIW NDL  SL++L  ++  +G D+L V+ SCSLLH  +DL  ENKLD   KSW AFA QKV E   L + L  GR+  G     N     SRK+S R
Sbjct:  235 LKCLLATYFGSLDDNL--SLTCQLPVDGLHIDYCRAPDQLDSVLSQLPAEKILSVGIIDGRNIWCNDLNRSLTLLENIQSSLG-DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKR 390          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_COXB1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=metE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 67/159 (42.14%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   44 LNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL-AGRKDEGF-FSANAAAQASRKSSPR 514
            L  L+ TYF  +      +LT    V     D  R    L+ + S  PA K L  G++DGRNIW NDL  SL++L  ++  +G D+L V+ SCSLLH  +DL  ENKLD   KSW AFA QKV E   L + L  GR+  G     N     SRK+S R
Sbjct:  235 LKCLLATYFGSLDDNL--SLTCQLPVDGLHIDYCRAPDQLDSVLSQLPAEKILSVGIIDGRNIWCNDLNRSLTLLENIQSSLG-DRLWVAPSCSLLHVPIDLDQENKLDVELKSWFAFAKQKVAEAAFLTRGLREGRESIGAELKKNEEVIISRKTSKR 390          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_BURS3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia sp. (strain 383) GN=metE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 69/173 (39.88%), Postives = 94/173 (54.34%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDE--GFFSANAAAQASRKSSPR 514
            F  AYA LE+    + VL+ TYF  +       L +   V     D +     ++ +    PA + L  G ++GRNIW  DL A+L  L  L   +G D+L ++ SCSLLH  VDL +E KLD   +SWLAFA QK+ E+  LA AL   +D+     +ANAAA  SR+ SPR
Sbjct:  228 FRTAYAALETRR--IKVLLATYFGQLQGNL--ALATSLPVDGLHVDAINARDEVDALARELPAERVLSVGAINGRNIWKTDLNATLDWLEPLAKRLG-DRLWLAPSCSLLHVPVDLASEEKLDAEIRSWLAFALQKLDELKVLATALNEGRDKVADALAANAAAIHSRRHSPR 395          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_STRPI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.245e-21
Identity = 64/160 (40.00%), Postives = 93/160 (58.13%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNAL--------AKALAGRKD 457
            F   Y +L +   GL VL++TYF DV  + +  L +L  V A GFD V G KTLEL+K GFPA K L+AG+V+G+NIW N+   SL+VL  +      + +V+++SCSLLH      NE + +    +  AFA +K+ E+  L        ++ALA  K+
Sbjct:  221 FLNLYNKLLADKKGLEVLLQTYFGDV-RDVYADLVNLP-VDAIGFDFVEGKKTLELVKGGFPADKTLYAGIVNGKNIWRNNYEKSLAVLEQIPA----ENIVLTSSCSLLHVPFTTANE-EFEPALLNHFAFAVEKLDEIRDLDAIRNGQGSEALAANKE 373          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.245e-21
Identity = 77/171 (45.03%), Postives = 89/171 (52.05%), Query Frame = 2
Query:   14 YAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP--AGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKD--EGFFSANAAAQASRKSSPR 514
            Y  L S  +   + V TYF D P  A   L     V A G DLV G  T     +G P  AGK L AGVVDGRN+W  DL A+L  L  L G      + VSTSCS LH    L  E  LDD  +SWLAF A+KV EV  LA+AL    D      +++ AA ASRK  PR
Sbjct:  230 YTALCSVSNRPAIYVATYFGD-PGAALPALARTP-VEAIGVDLVAGADTSV---AGVPELAGKTLVAGVVDGRNVWRTDLEAALGTLATLLGSAAT--VAVSTSCSTLHVPYSLEPETDLDDALRSWLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPR 393          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.245e-21
Identity = 77/171 (45.03%), Postives = 89/171 (52.05%), Query Frame = 2
Query:   14 YAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFP--AGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKD--EGFFSANAAAQASRKSSPR 514
            Y  L S  +   + V TYF D P  A   L     V A G DLV G  T     +G P  AGK L AGVVDGRN+W  DL A+L  L  L G      + VSTSCS LH    L  E  LDD  +SWLAF A+KV EV  LA+AL    D      +++ AA ASRK  PR
Sbjct:  230 YTALCSVSNRPAIYVATYFGD-PGAALPALARTP-VEAIGVDLVAGADTSV---AGVPELAGKTLVAGVVDGRNVWRTDLEAALGTLATLLGSAAT--VAVSTSCSTLHVPYSLEPETDLDDALRSWLAFGAEKVREVVVLARALRDGHDAVADEIASSRAAIASRKRDPR 393          
The following BLAST results are available for this feature:
BLAST of CX675616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
METE_RALEH9.530e-2240.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCA19.530e-2245.615-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBU9.530e-2242.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBR9.530e-2242.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBN9.530e-2242.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB19.530e-2242.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURS39.530e-2239.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPI1.245e-2140.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTU1.245e-2145.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA1.245e-2145.035-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63E07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63E07-I13-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675616 ID=CX675616; Name=CX675616; organism=Citrus sinensis; type=EST; length=516bp
ATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTGGCTTGAATG
TTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCATTCCAGACC
CTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTTGGTTCGTGG
AACCAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTGGCAAGTACC
TCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAATGATCTTGCT
GCTTCTCTTAGTGTTCTCCGGGGGCTTGAGGGTGTTGTTGGCAAAGACAA
GCTTGTGGTCTCCACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTG
TTAATGAGAACAAACTCGACGACTAANTCAAGTCATGGCTGGCATTTGCT
GCCCAGAAAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCG
AAAGGATGAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAA
AGTCCTCCCCGAGAGT
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