CX675616

Overview
NameCX675616
Unique NameCX675616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_RHOPT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.797e-20
Identity = 62/173 (35.84%), Postives = 96/173 (55.49%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKD--EGFFSANAAAQASRKSSPR 514
            F +AY ++   L  L++++ TYF  +  +   T  +L  +     DLVR  K +  + +  P    L  GVVDGRNIW  DL   L  +  +    G +++ ++ SCSLLH  VDL  E  LD   KSWL+F+ QK+ E++ L+ AL+G +   +   SA+A A A+R+ SP+
Sbjct:  248 FRDAYGQIARELPHLDIMLTTYFGGL-GDNLDTALALP-IAGLHLDLVRAPKQINAVIAKGPKDLVLSLGVVDGRNIWRADLPDLLDRVEPIVQQRGAERVQLAPSCSLLHVPVDLELETGLDPDLKSWLSFSLQKMGELSTLSGALSGDRAAVQDQLSASAKAAATRRKSPK 418          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_PSEU5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=metE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.797e-20
Identity = 69/174 (39.66%), Postives = 95/174 (54.60%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKD---EGFFSANAAAQASRKSSPR 514
            F  AY  L+   + L  LV TYF  +  E    L +   V     DLVR  +   +I    PA K L  G+V+GRN+W  DL  +L V R     +G ++L ++ SCSLLH+ VDL  E++LD+  KSWLAFA QK  EV  LA+A+   +D   +   + + A QA+R  SPR
Sbjct:  230 FERAYNLLQR--APLKKLVATYFGGL--EDNLGLAATLPVDGLHIDLVRAPEQYPVILDRLPAYKVLSLGLVNGRNVWRCDLDKALEVARHAAERLG-ERLWLAPSCSLLHSPVDLEREDRLDEEVKSWLAFAVQKCSEVATLARAIDDPQDAEVQAALARSRAVQAARAQSPR 398          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_PSEE4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas entomophila (strain L48) GN=metE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.797e-20
Identity = 70/160 (43.75%), Postives = 85/160 (53.12%), Query Frame = 2
Query:   44 LNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSANA---AAQASRKSSPR 514
            L  L+ TYF  +  E    L +   V     DLVR       I    PA K L  GVV+GRN+W  DL  +L VLR     +G D+L V+ SCSLLH+ VDL  E+KLDD  KSWLAFA QK  EV  LAKA+   +     +  A   A Q  R +SPR
Sbjct:  238 LKKLIATYFGGL--EDNLGLAANLPVDGLHIDLVRAPDQYPTILDRLPAYKVLSLGVVNGRNVWRCDLEKALEVLRHAHERLG-DRLWVAPSCSLLHSPVDLAREDKLDDELKSWLAFAVQKCQEVALLAKAINQPEAADVVTVLAQSRAVQHRRATSPR 394          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_LACLM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.797e-20
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI-KSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSANAA 484
            F + Y EL    + L VL++TYF D+   ++Q +  L      G D V G ++++L+ K GFP  K LFAGVV+G+NIW N    +LS+L+ L  +   D +V++TSCSL H  V   NE KL     +  AFA +K+VEV+ +++    +K+      N A
Sbjct:  221 FIKIYQELLKNKNKLRVLLQTYFGDL-RNSYQEIIKLD-FDGIGLDFVEGRESVKLVQKYGFPKNKLLFAGVVNGKNIWRNHYQKTLSLLKDLGNI---DNIVINTSCSLQHVPVTTENETKLSKEILNHFAFAKEKLVEVSEISEIYV-KKNTSLLDKNIA 376          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_PSEPW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas putida (strain W619) GN=metE PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.347e-20
Identity = 71/161 (44.10%), Postives = 89/161 (55.28%), Query Frame = 2
Query:   44 LNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSA----NAAAQASRKSSPR 514
            L  LV TYF  +  E    L +   V     DLVR  +    I    PA K L  G+V+GRN+WA DL  ++ VLR     +G D+L V+ SCSLLH+ VDL  E++LD   KSWLAFA QK  EV  LAKA+  + D    +A    + A QA R SSPR
Sbjct:  242 LKKLVATYFGGL--EENLGLAANLPVDGLHIDLVRAPEQYPTILDRLPAYKILSLGLVNGRNVWACDLEKAVDVLRHAAERLG-DRLWVAPSCSLLHSPVDLGREDQLDTELKSWLAFAVQKCQEVAVLAKAV-NQPDAAEVAAALARSRAIQAGRASSPR 398          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_MYCLE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium leprae GN=metE PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.347e-20
Identity = 72/169 (42.60%), Postives = 87/169 (51.48%), Query Frame = 2
Query:   14 YAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKD--EGFFSANAAAQASRKSSPR 514
            Y  L S      + V TYF + P  +   L     + A G D V G  T         AGK L AG+VDGRNIW  DL ++LS L  L G      + VSTSCS LH    L  E  LDD  +SWLAF A+KV EV  LA+AL   +D      +A+ AA ASR+S PR
Sbjct:  230 YTALGSVSKRPAIYVATYFGN-PGASLAGLARTP-IEAIGVDFVCGADTSVAAVPEL-AGKTLVAGIVDGRNIWRTDLESALSKLATLLGSAAT--VAVSTSCSTLHVPYSLEPETDLDDNLRSWLAFGAEKVAEVVVLARALRDGRDAVADEIAASNAAVASRRSDPR 393          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_STRR6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=metE PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.066e-20
Identity = 62/160 (38.75%), Postives = 90/160 (56.25%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNAL--------AKALAGRKD 457
            F   Y +L +   GL VL +TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K L+ G+V+G+NIW N+   SL+VL  +      + +V+++SCSLLH      NE + +    +  AFA +K+ E+  L        ++ALA  K+
Sbjct:  221 FLNLYNKLLADKKGLEVLFQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYVGIVNGKNIWRNNYEKSLTVLEQIPA----ENIVLTSSCSLLHVPFTTANE-EFEPALLNHFAFAVEKLDEIRDLDAIRNGQGSEALAANKE 373          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_STRP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=metE PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.066e-20
Identity = 62/160 (38.75%), Postives = 90/160 (56.25%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNAL--------AKALAGRKD 457
            F   Y +L +   GL VL +TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K L+ G+V+G+NIW N+   SL+VL  +      + +V+++SCSLLH      NE + +    +  AFA +K+ E+  L        ++ALA  K+
Sbjct:  221 FLNLYNKLLADKKGLEVLFQTYFGDV-RDVYADLVNLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYVGIVNGKNIWRNNYEKSLTVLEQIPA----ENIVLTSSCSLLHVPFTTANE-EFEPALLNHFAFAVEKLDEIRDLDAIRNGQGSEALAANKE 373          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_LACLS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=metE PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.066e-20
Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI-KSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSANAA 484
            F + Y EL    + L VL++TYF D+  +++Q +  L      G D V G ++++L+ K GFP  K LFAGVV+G+NIW N    +LS+L+ L  +   D +V++TSCSL H  V   NE KL     +  AFA +K+VEV+ +++    +K+      N A
Sbjct:  221 FIKIYQELLKNKNKLKVLLQTYFGDL-RDSYQEIIKLD-FDGIGLDFVEGRESVKLVQKYGFPQDKLLFAGVVNGKNIWRNHYQKTLSLLKDLGNI---DNIVINTSCSLQHVPVTTENEIKLSKEILNHFAFAKEKLVEVSEISEIYV-KKNTSLLDKNIA 376          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_BURPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.004e-20
Identity = 70/171 (40.94%), Postives = 90/171 (52.63%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL--AGRKDEGFFSANAAAQASRKSS 508
            FS AY  L +  SG+ VL+ TYF      A +   ++  V     DLVR  + L+  ++  P    L AGV+DGRNIW  DL      L+ L    G ++L VS+SCSLLH  V L  E KLD   KSWLAFA +K+ EV  LA AL      +    +A+ A  A R SS
Sbjct:  220 FSAAYDVLGT--SGVKVLLATYFESAAEHAPRV--AVLPVAGVHLDLVRAPQQLDAWRAALPKHAVLSAGVIDGRNIWRADLGEIFESLQALHAEFG-ERLWVSSSCSLLHVPVSLDAEQKLDADLKSWLAFATEKLGEVATLALALRDPAAAEATLAAADRALDARRHSS 385          
The following BLAST results are available for this feature:
BLAST of CX675616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
METE_RHOPT1.797e-2035.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEU51.797e-2039.665-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEE41.797e-2043.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLM1.797e-2037.655-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEPW2.347e-2044.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCLE2.347e-2042.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRR63.066e-2038.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP23.066e-2038.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLS3.066e-2037.655-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPP4.004e-2040.945-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63E07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63E07-I13-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675616 ID=CX675616; Name=CX675616; organism=Citrus sinensis; type=EST; length=516bp
ATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTGGCTTGAATG
TTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCATTCCAGACC
CTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTTGGTTCGTGG
AACCAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTGGCAAGTACC
TCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAATGATCTTGCT
GCTTCTCTTAGTGTTCTCCGGGGGCTTGAGGGTGTTGTTGGCAAAGACAA
GCTTGTGGTCTCCACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTG
TTAATGAGAACAAACTCGACGACTAANTCAAGTCATGGCTGGCATTTGCT
GCCCAGAAAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCG
AAAGGATGAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAA
AGTCCTCCCCGAGAGT
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