CX675616

Overview
NameCX675616
Unique NameCX675616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_LISIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria innocua GN=metE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.987e-19
Identity = 60/166 (36.14%), Postives = 87/166 (52.41%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVR--GTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSANAAAQA 493
            F + Y      +  L + ++TYF  +  + ++ + +L  V A G D V   G     L   GFP  KYL AGV+DGRN+W +DL A L++L  +   V +DKL+V  S SLLH  V  ++E  LD+     L+FA QK+ E+  L KAL    +      N A +A
Sbjct:  221 FEKVYKAFHDAVPNLKIELQTYFESL--DYYEEVVNLP-VAAVGIDFVHDHGDSIKALKAHGFPQNKYLAAGVIDGRNVWRSDLDAKLALLTDIAHYVAEDKLIVQPSNSLLHVPVTKLSEPDLDEVILGGLSFADQKLDEIAILTKALTEGAESVAAELNEAREA 383          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_PELCD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.595e-19
Identity = 59/167 (35.33%), Postives = 82/167 (49.10%), Query Frame = 2
Query:    8 EAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSANAAAQASRKSS 508
            + Y  L +      ++V TYF  +  E      SL  V     DLVR    LE +    P    L  G++DGRN+W ++L  ++S  +      G D+++++ SCSLLH  VDL  E  LD   +SWLAFA QK  EVN +  AL G        AN  A  +R+ S
Sbjct:  223 DVYRRLAAVAGPCRLMVATYFGALQ-ENLDLALSLP-VDGLHVDLVRAPGQLEKVLPCLPENMVLSLGLIDGRNVWRSNLRQAISTAQDAVVARGSDRVMIAPSCSLLHVPVDLAGEAVLDPRIRSWLAFARQKCQEVNVVRLALDGEDVTEVLQANDTAMENRRKS 387          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_PSEF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.389e-19
Identity = 68/174 (39.08%), Postives = 93/174 (53.45%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSA---NAAAQASRKSSPR 514
            F  AY +++     L  L+ TYF  +  E    L +   V     DLVR  +    I    PA K L  G+V+GRN+W  DL  +L+ L+     +G ++L V+ SCSLLH+ VDL  E++LD   KSWLAFA QK  EV  LA+A+   +      A   + A QASR +SPR
Sbjct:  225 FERAYNQIQR--EPLKKLLATYFGGL--EENLGLAANLPVDGLHIDLVRAPEQYPTILDRLPAYKVLSLGLVNGRNVWRCDLEKALATLQHAHERLG-ERLWVAPSCSLLHSPVDLDREDQLDAELKSWLAFAVQKCQEVAVLAQAVNQPQARAVLKALEQSRAVQASRAASPR 393          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_LISMO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 65/176 (36.93%), Postives = 95/176 (53.98%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGT-KTLELIKS-GFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDE---GFFSANAAAQASRKSSPR 514
            F + Y   ++ +  L + ++TYF  +  + ++ + +L  V A G D V     +LE +K+ GFP  KYL AGV+DGRN+W +DL A LS+L  +   V   KL+V  S SLLH  V  ++E  LD+     L+FA QK+ E+  L KAL    +        A AA  A  +SS R
Sbjct:  221 FEKVYQAFQTAVPNLKIELQTYFESL--DYYEEVVNLP-VAAIGIDFVHDHGDSLEALKAHGFPEDKYLAAGVIDGRNVWRSDLDAKLSLLTEIADYVTDGKLIVQPSNSLLHVPVTKLSEPDLDEVILGGLSFADQKLDEIAILTKALTDGAESVTAELEDARAAVTALNESSHR 393          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_CHRSD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 67/174 (38.51%), Postives = 90/174 (51.72%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGR---KDEGFFSANAAAQASRKSSPR 514
            F  AY +L+S  + + +L+ TYF  +       L +   V     D VR  + L+ +    P  K L  G +DGRNIW  DLAA    L+     +G ++L +S SCSLLH  VDL  E  LD   KSWLAFA QK+ E+  LA  L GR   +D     A  +A  +R+ SPR
Sbjct:  224 FESAYNKLQS--APVKLLLATYFGALGDNL--GLAAGLPVAGLHIDTVRAPEQLDAVLDRLPTYKVLSLGAIDGRNIWRADLAALRERLQVARARLG-ERLWISASCSLLHVPVDLDAETDLDAELKSWLAFARQKLDEIVTLAHLLDGRATPEDTARLEAATSALDARRQSPR 392          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_BURP8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 61/159 (38.36%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   44 LNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKD--EGFFSANAAAQASRKSSPR 514
            + VL+ TYF  +       L     V     D +     +  + +  P    L  GV++GRN+W  DL A+L+ L  L   +G D+L ++ SCSLLH+ VDL +E KLD   +SWLAFA QK+ E+  LA AL   +   E    ANA A  SR++SPR
Sbjct:  240 VRVLLATYFGQLKENL--ELACQLPVDGLHIDAIHARDEVAQVAAQVPETAVLSVGVINGRNVWKTDLNAALAWLEPLHATLG-DRLWIAPSCSLLHSPVDLNSERKLDADIRSWLAFALQKLDELTLLASALNNGRACVEAELLANAKAIESRRASPR 395          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_VIBPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio parahaemolyticus GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.782e-19
Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 2
Query:   38 SGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAG 448
            S + VL+ TYF  V  +    +  L  V     DL    + L+ + +  P G  L AGVV+GRN+W +DL+A L  L+ ++  +G DKL V++SCSLLH+ VDL  E +L +  KSW AFA QKV EV  L +AL G
Sbjct:  235 SDVKVLLTTYFDSV-TDTLDKIVELP-VDGLHVDLSAAPQQLDDVVAKLPEGWVLSAGVVNGRNVWRSDLSAQLERLQPVKEKLG-DKLWVASSCSLLHSPVDLELETELSEEVKSWFAFAKQKVTEVALLGRALDG 368          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_SACD2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.782e-19
Identity = 69/177 (38.98%), Postives = 93/177 (52.54%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSA------NAAAQASRKSSPR 514
            F   Y +L+  L  L+VL+ TYF   P +    L +     A   D+ RG   L  +       K L  GV+DGRNIW  DL   L+ L+ ++  +G   L ++ SCSLLHT VDL +E  LD   K+WLAFA QK+ E+N L +AL    D G  S       NA A A+RK+S +
Sbjct:  229 FERVYHQLQ--LPNLSVLLATYFG--PLDTNLRLAARLPTAALHLDITRGGDDLPRVLDILSPHKILSVGVIDGRNIWKADLNKLLAQLKPVKERLGNG-LWLAPSCSLLHTPVDLDSEEALDADIKNWLAFAKQKLQELNILQRAL----DNGETSVAEALVHNAGAIAARKASAK 396          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_LISMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.782e-19
Identity = 63/176 (35.80%), Postives = 90/176 (51.14%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVR--GTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDE---GFFSANAAAQASRKSSPR 514
            F + Y   ++ +  L + ++TYF  +  + ++ + +L  V A G D V   G     L   GFP  KYL AGVVDGRN+W +DL A L +L  +   V   KL+V  S SLLH  V  ++E  LD+     L+FA QK+ E+  L KAL    +        + AA  A  +SS R
Sbjct:  221 FEKVYQAFQTAVPNLKIELQTYFESL--DYYEEVVNLP-VAAIGIDFVHDHGDSIKALKAHGFPEDKYLAAGVVDGRNVWRSDLDAKLELLTEIANYVADGKLIVQPSNSLLHVPVTKLSEPDLDEVILGGLSFADQKLEEITILTKALTNGAESVAAELEESRAAVTALNESSHR 393          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_LISMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.782e-19
Identity = 63/176 (35.80%), Postives = 90/176 (51.14%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVR--GTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDE---GFFSANAAAQASRKSSPR 514
            F + Y   ++ +  L + ++TYF  +  + ++ + +L  V A G D V   G     L   GFP  KYL AGVVDGRN+W +DL A L +L  +   V   KL+V  S SLLH  V  ++E  LD+     L+FA QK+ E+  L KAL    +        + AA  A  +SS R
Sbjct:  221 FEKVYQAFQTAVPNLKIELQTYFESL--DYYEEVVNLP-VAAIGIDFVHDHGDSIKALKAHGFPEDKYLAAGVVDGRNVWRSDLDAKLELLTEIANYVADGKLIVQPSNSLLHVPVTKLSEPDLDEVILGGLSFADQKLEEITILTKALTNGAESVAAELEESRAAVTALNESSHR 393          
The following BLAST results are available for this feature:
BLAST of CX675616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
METE_LISIN1.987e-1936.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PELCD2.595e-1935.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEF53.389e-1939.085-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMO4.427e-1936.935-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRSD4.427e-1938.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP84.427e-1938.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBPA5.782e-1943.075-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SACD25.782e-1938.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMF5.782e-1935.805-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMC5.782e-1935.805-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63E07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63E07-I13-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675616 ID=CX675616; Name=CX675616; organism=Citrus sinensis; type=EST; length=516bp
ATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTGGCTTGAATG
TTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCATTCCAGACC
CTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTTGGTTCGTGG
AACCAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTGGCAAGTACC
TCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAATGATCTTGCT
GCTTCTCTTAGTGTTCTCCGGGGGCTTGAGGGTGTTGTTGGCAAAGACAA
GCTTGTGGTCTCCACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTG
TTAATGAGAACAAACTCGACGACTAANTCAAGTCATGGCTGGCATTTGCT
GCCCAGAAAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCG
AAAGGATGAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAA
AGTCCTCCCCGAGAGT
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