CX675616

Overview
NameCX675616
Unique NameCX675616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_ACICJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidiphilium cryptum (strain JF-5) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.782e-19
Identity = 61/162 (37.65%), Postives = 89/162 (54.94%), Query Frame = 2
Query:   50 VLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLR-GLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEG------FFSANAAAQASRKSSPR 514
            +L+ +YFA + A+   T  +L  V     DLVRG   L  + +      +L  G+VDGRN+W  DL A+L+  R     + G ++L+++ SCSLLH  VDL  E++LD   + WLAFA QK+ EV  +A+ L    DEG         A+ AA  +R+ S R
Sbjct:  240 LLLASYFAPI-ADNLPTALALP-VAGLHLDLVRGRDDLAPVLAAIGPATWLSLGLVDGRNVWRADLRAALATAREAARALGGSERLMIAPSCSLLHVPVDLAQEDRLDPAIRPWLAFATQKLAEVATIARGL----DEGEGAIAEALEASDAALRTRRDSAR 395          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_CAMJJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=metE PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.551e-19
Identity = 59/160 (36.88%), Postives = 89/160 (55.62%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI-KSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSAN 478
            F E Y EL +    L +L+++YF D+  + +  L   K   A G D + G ++L LI K GF   K LFAG+++G+NI+AND A SL +++ L+       +V++TSCSLLH       E+KLD       AFA +K+ E+  L + L   ++   F AN
Sbjct:  221 FEEFYQELLNHKKDLKILLQSYFGDL-RDIYPKLLESK-FDALGLDFIEGKQSLALIQKYGFAKDKILFAGLINGKNIYANDYAKSLKLIKELQKYT--QNIVLNTSCSLLHVPYSTEFESKLDSSYLKLFAFAKEKLQELKDLKEILNSSEENPLFRAN 376          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_CAMJ8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=metE PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.551e-19
Identity = 59/160 (36.88%), Postives = 89/160 (55.62%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI-KSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSAN 478
            F E Y EL +    L +L+++YF D+  + +  L   K   A G D + G ++L LI K GF   K LFAG+++G+NI+AND A SL +++ L+       +V++TSCSLLH       E+KLD       AFA +K+ E+  L + L   ++   F AN
Sbjct:  221 FEEFYQELLNHKKDLKILLQSYFGDL-RDIYPKLLESK-FDALGLDFIEGKQSLALIQKYGFAKDKILFAGLINGKNIYANDYAKSLKLIKELQKYT--QNIVLNTSCSLLHVPYSTEFESKLDSSYLKLFAFAKEKLQELKDLKEILNSSEENPLFRAN 376          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_SALRD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 9.862e-19
Identity = 63/170 (37.06%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    8 EAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTL-ELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKD--EGFFSANAAAQASRKSS 508
            +AY  L    + + + V TYF  +  +   T   L  +     DL RG + L E +  G P    L  GV+DGRN+W  DL A L  +      +G D+++V  SCSLLH  VDL  E  L D  K+W AFA QK+ E+ ALA+   G +D  E  F  +  A A+R  S
Sbjct:  231 QAYEALADA-ADIELHVATYFGGLE-DNLPTALDLP-IDVLHLDLTRGEEQLDEALDHGVPDDLALSLGVIDGRNVWRADLDALLGTVETAIDALGTDRVLVGPSCSLLHVPVDLDTEPGLSDEMKTWFAFATQKIEEIVALAERADGHEDATEALFEKSRRAHAARAES 397          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_STRCO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces coelicolor GN=metE PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.288e-18
Identity = 71/171 (41.52%), Postives = 88/171 (51.46%), Query Frame = 2
Query:   11 AYAELESTLSGLNVLVETYFADVPAEAFQTLTS--LKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKD--EGFFSANAAAQASRKSSP 511
            AY EL +      +LV +YF D   +A   L    ++G+ A  F     T    L   G   GK L AGVV+GRNIW NDL  SLS L  L G+   D++ VS SCSLLH  +D   E  ++     WLAFA QK  E+  LAK LA   D   G  +A+ A  ASR  SP
Sbjct:  234 AYRELGALTDRPKLLVASYF-DRLGDALPVLAKAPIEGL-ALDFTDAAATNLDALAAVGGLPGKRLVAGVVNGRNIWINDLQKSLSTLGTLLGLA--DRVDVSASCSLLHVPLDTGAERDIEPQILRWLAFARQKTAEIVTLAKGLAQGTDAITGELAASRADMASRAGSP 400          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_LACLA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. lactis GN=metE PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.288e-18
Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELI-KSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALA 433
            F   Y EL  + + LN+L++TYF DV  ++++ +  L      G D + G  +L LI K GFP  K LFAG+V+G+NIW N+   +L +L  L+ V     +V++TSCSL H  V + NE KL        +FA +K+ E++ ++
Sbjct:  223 FVSIYEELLKSKNNLNILLQTYFGDV-RDSYKEIIKLD-FDGIGLDFIEGRDSLALIQKYGFPKKKILFAGLVNGKNIWRNNYQKTLELLTALDEVA---DIVINTSCSLQHVPVTIKNETKLSKEILKHFSFATEKLNEIDEIS 362          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 92.0485 bits (227), Expect = 1.682e-18
Identity = 58/155 (37.42%), Postives = 83/155 (53.55%), Query Frame = 2
Query:   50 VLVETYFADVPAEAFQTLTSLKG--VTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSANAAAQASRKSS 508
            + + TYF  V       L ++KG  V A   D VR  +  + + +     + L  G+VDGRNIW ND   S +++      +G D++VV+TS SLLHT VDL NE KLD   K + +FA QK+ EV  + K ++G+       ANA +  SR  S
Sbjct:  247 ITLATYFGTV----VPNLDAIKGLPVAALHVDFVRAPEQFDEVVAAIGNKQTLSVGIVDGRNIWKNDFKKSSAIVNKAIEKLGADRVVVATSSSLLHTPVDLNNETKLDAEIKGFFSFATQKLDEVVVITKNVSGQDVAAALEANAKSVESRGKS 397          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_RHOSR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodococcus sp. (strain RHA1) GN=metE PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.682e-18
Identity = 70/158 (44.30%), Postives = 87/158 (55.06%), Query Frame = 2
Query:   35 LSGLN----VLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKAL-AGRK--DEGFFSANAAA 487
            LSGL     +LV +YF  +  +A   + S  GV     DLV G+ TL  +       K++ AGVVDGRNIW  DL A+L+ L  L G  G   L VSTSCSLLH    L  E  +D   +SWLAF  +KV EV  L  AL +GR+  D+ F  A AAA
Sbjct:  228 LSGLELRPAILVASYFGSL-GDALPAIAST-GVEGIAIDLVAGSDTLATVPD--LTRKHVVAGVVDGRNIWRTDLDAALASLGTLLGSTGS--LAVSTSCSLLHVPYTLDAETGIDKALRSWLAFGTEKVREVVTLGTALTSGRESVDDEFALARAAA 379          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_CAMJD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=metE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.197e-18
Identity = 56/160 (35.00%), Postives = 89/160 (55.62%), Query Frame = 2
Query:    2 FSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKS-GFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDEGFFSAN 478
            F E Y EL +    L +L+++YF D+  + +  L   K   A G D + G ++L L++  GF   K LFAG+++G+NI+AND A SL +++ L+       ++++TSCSLLH       E+KLD       AFA +K+ E+  L + L   ++   F AN
Sbjct:  221 FEEFYQELLNHKKDLKILLQSYFGDL-RDIYPKLLESK-FDALGLDFIEGKQSLALVQQYGFAKDKILFAGLINGKNIYANDYAKSLKLIKELQKYT--QNIILNTSCSLLHVPYSTEFESKLDPSYLKLFAFAKEKLQELKDLKEILNSSEENPLFKAN 376          
BLAST of CX675616 vs. ExPASy Swiss-Prot
Match: METE_BACHD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus halodurans GN=metE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.197e-18
Identity = 56/151 (37.09%), Postives = 82/151 (54.30%), Query Frame = 2
Query:   14 YAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG-TKTLELIKS-GFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDD*XKSWLAFAAQKVVEVNALAKALAGRKDE 460
            Y ++   ++   + ++TYF  V          +KG+   G D V G  K LE +++ GFP  K L AG++DGRNIW ++L     ++  LE  V KD+LV+  SCSLLH  V    E KLD      LAFA +K+ E++ L +  AG + E
Sbjct:  222 YEQINEAIADAPLFLQTYFDAVTFYEEVVSLPVKGI---GLDFVHGGAKNLEALRTFGFPEDKVLAAGIIDGRNIWISNLRERHELVHQLEQHVAKDRLVLQPSCSLLHVPVTTKREEKLDPTLLGVLAFANEKLTELHTLKQLAAGNEAE 369          
The following BLAST results are available for this feature:
BLAST of CX675616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
METE_ACICJ5.782e-1937.655-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJJ7.551e-1936.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJ87.551e-1936.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALRD9.862e-1937.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRCO1.288e-1841.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLA1.288e-1837.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YEAST1.682e-1837.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOSR1.682e-1844.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJD2.197e-1835.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACHD2.197e-1837.095-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_63E07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63E07-I13-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675616 ID=CX675616; Name=CX675616; organism=Citrus sinensis; type=EST; length=516bp
ATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTGGCTTGAATG
TTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCATTCCAGACC
CTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTTGGTTCGTGG
AACCAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTGGCAAGTACC
TCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAATGATCTTGCT
GCTTCTCTTAGTGTTCTCCGGGGGCTTGAGGGTGTTGTTGGCAAAGACAA
GCTTGTGGTCTCCACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTG
TTAATGAGAACAAACTCGACGACTAANTCAAGTCATGGCTGGCATTTGCT
GCCCAGAAAGTTGTTGAAGTGAATGCATTGGCCAAGGCTTTGGCTGGCCG
AAAGGATGAGGGATTCTTCTCTGCCAATGCTGCAGCTCAGGCTTCAAGAA
AGTCCTCCCCGAGAGT
back to top