CK939135

Overview
NameCK939135
Unique NameCK939135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.319e-52
Identity = 98/170 (57.65%), Postives = 117/170 (68.82%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNAD-ACVWS--NG-----KXXXXXXXXXXXXXXXXWFSQE-LDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECRTS*KFCK 486
            +LWFDPTA FH YSILWNP  IVF +DG PIREFKN E +GVA+PKNQPMR+Y SLWNADDWATRGGLVKT+W+  PF AS+ N+N++ ACVWS  NG                      WFSQ  +DS+S++ L+WVQ+ +M+YNYC D KRF  GLP EC    K  K
Sbjct:  135 YLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENACVWSIVNGTTTTSPCSPGDSTSSSSSSTSEWFSQRGMDSSSKKVLRWVQRKFMVYNYCKDKKRFSNGLPVECTAKNKNTK 304          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.319e-52
Identity = 94/156 (60.26%), Postives = 112/156 (71.79%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECRTS 471
            +LWFDPT +FHTYSI+W PQ I+F VD  PIR F N+E +GV FPK+QPMRIYSSLWNADDWATRGGLVKTDW+ APFTA YR FNA AC  S+G                   + EL++  + RL+WVQK +MIYNYC+D KRFP+G P EC+ S
Sbjct:  135 YLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTASSG---CDPKFKSSFGDGKLQVATELNAYGRRRLRWVQKYFMIYNYCSDLKRFPRGFPPECKKS 287          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.408e-51
Identity = 95/158 (60.13%), Postives = 113/158 (71.52%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFN-ADAC----VWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            +LWFDPTADFHTY++LWNP  I+F VDG PIR FKN+E+ GVA+PK+QPM+IYSSLW ADDWAT+GG VKTDWT+APF+ASYR+FN  D C    +W+                   W    L+S    +LKWVQK+YMIYNYC D KRFPQGLP EC
Sbjct:  134 YLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRSFNDVDCCSRTSIWN---------WVTCNANSNSWMWTTLNSNQLGQLKWVQKDYMIYNYCTDFKRFPQGLPTEC 282          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.467e-50
Identity = 91/154 (59.09%), Postives = 109/154 (70.78%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFN-ADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            +LWFDPTADFHTY++LWNP  I+F VDG PIR FKN+E+ GVA+PK+QPM+IYSSLW ADDWAT+GG VKTDWT+APF+ASY++FN  D C                      W    L+S    ++KWVQ +YMIYNYC D KRFPQGLP EC
Sbjct:  133 YLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKSFNDVDCC-----SRTSLLNWVTCNANSNSWMWTTLNSNQYGQMKWVQDDYMIYNYCTDFKRFPQGLPTEC 281          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.536e-48
Identity = 88/153 (57.52%), Postives = 103/153 (67.32%), Query Frame = 1
Query:    7 LWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465
            LWFDPTADFHTY++ WNP  I+F VDG PIR FKN+E  GVA+PKNQPMRIYSSLW ADDWAT GG VK DW++APF ASYRNFN      S+                  W    L+     ++ WVQ+++MIYNYC D KRFPQGLP EC+
Sbjct:  138 LWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNFNDQ----SSCSRTSSSKWVTCEPNSNSWMWTTLNPAQYGKMMWVQRDFMIYNYCTDFKRFPQGLPKECK 286          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.276e-44
Identity = 88/155 (56.77%), Postives = 103/155 (66.45%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWS-NGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465
            +LWFDP+ D+H+YS+LWN  +IVF VD  PIR FKNS+ +GV FP NQPM+IYSSLWNADDWATRGGL KT+W  APF ASYR F+ D C  S N K                   Q+LD+   +RLKWV+K Y IYNYC D  RFP   P ECR
Sbjct:  139 NLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEF----QDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVP-PPECR 288          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.334e-44
Identity = 83/153 (54.25%), Postives = 104/153 (67.97%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            +LWFDPT  +H+YS+LWN  +IV  VD  PIR FKNS+ +GV FP NQPM+IYSSLW+ADDWATRGGL KTDW++APFTASY +F+ D C  +  +                 F Q+LD+    RL+WV++ Y IYNYC D KR+P  LP EC
Sbjct:  139 YLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAF-QDLDALQYRRLRWVRQKYTIYNYCTDRKRYPT-LPPEC 289          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.411e-43
Identity = 84/159 (52.83%), Postives = 105/159 (66.04%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWS-NGKXXXXXXXXXXXXXXXXWFSQ----ELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465
            +LWFDPT ++H YSILWN  +IVF VD  PIR FKNS+ +GV FP +QPM+IY+SLWNADDWATRGGL KTDW+ APF A+Y+ F+ D C  S N K                W+ Q    +LD+    RL+WV++ Y IYNYC D KR+P   P EC+
Sbjct:  140 YLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAK--------FCDTQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPECK 290          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.362e-43
Identity = 84/158 (53.16%), Postives = 103/158 (65.19%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQ----ELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465
            +LWFDP+  +HTYS+LWN  +IVF VD  PIR FKN++ +GV FP NQPM++YSSLWNADDWATRGGL KT+W +APF ASYR F+ D C  S                   W+ Q    +LD+    RLKWV+  + IYNYC D  RFP  +PAECR
Sbjct:  141 YLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQAS-------VEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPV-MPAECR 290          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 9.146e-43
Identity = 83/158 (52.53%), Postives = 101/158 (63.92%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQ----ELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465
            +LWFDPT  +H YS+LWN  +IVF VD  PIR FKN + +GV FP NQPM++Y+SLWNADDWATRGGL KTDW+ APF A Y+ F+ D C  S                   W+ Q    +LDS    RLKWV++ + IYNYC D  R+PQ LP ECR
Sbjct:  139 YLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCEAS-------VNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQ-LPPECR 288          
The following BLAST results are available for this feature:
BLAST of CK939135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH21_ARATH6.319e-5257.65Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH6.319e-5260.26Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH1.408e-5160.13Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH3.467e-5059.09Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH5.536e-4857.52Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH5_ARATH1.276e-4456.77Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC6.334e-4454.25Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN1.411e-4352.83Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB5.362e-4353.16Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTHB_PHAAN9.146e-4352.53Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004433_G08 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939135 ID=CK939135; Name=CK939135; organism=Citrus sinensis; type=EST; length=638bp
GGGCACCTCTGGTTTGACCCCACTGCTGACTTTCACACCTATTCTATCCT
CTGGAATCCTCAGCGCATTGTCTTCTCTGTGGATGGTACTCCCATAAGAG
AGTTCAAGAACTCAGAGTCAATTGGAGTTGCATTCCCAAAGAATCAGCCA
ATGAGAATATACTCATCTCTCTGGAATGCTGATGACTGGGCTACAAGAGG
TGGCCTTGTCAAGACAGATTGGACGCATGCTCCCTTCACGGCTTCCTACA
GAAACTTCAACGCTGATGCCTGTGTCTGGTCTAATGGAAAATCTTCTTGC
GCTTCAAGTTCACCTTCCTCTCCATCCAGCAGCAGTGCCTGGTTCTCACA
AGAGCTTGATTCAACAAGTCAAGAAAGGCTGAAATGGGTGCAGAAGAATT
ACATGATTTACAATTATTGCGCTGATGCAAAGAGATTTCCCCAGGGACTC
CCTGCAGAATGCAGAACCTCTTAGAAGTTTTGCAAAATCAACACATACAT
CAAAAAAATTTATTCTTTTTGTCAATTCTTTGATTCTTTGTTGTATTTTG
TCGTCAATAAAATGGCAAATTAGTCCAACTTTCTCAATGTAATACAAAAT
TTAGCATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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