CK939135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.195e-42 Identity = 83/158 (52.53%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQ----ELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465 +LWFDP+ +HTYSILWN +IVF VD PIR FKN++ +GV FP NQPM++YSSLWNADDWATRGGL KT+W +APF ASY+ F+ D C S W+ Q +LD+ RLKWV+ + IYNYC D RFP +PAEC+ Sbjct: 142 YLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQAS-------VEAKYCATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDRTRFPV-MPAECK 291
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.661e-42 Identity = 84/158 (53.16%), Postives = 102/158 (64.56%), Query Frame = 1 Query: 4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWS-NGKXXXXXXXXXXXXXXXXWFSQ----ELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462 +LWFDPT +H YS+LWN +IVF VD PIR FKNS +GV FP NQPM+IY+SLWNADDWATRGGL KTDW+ APF ASY+ F+ D C S N K W+ Q +LD+ ++L WV+ Y IYNYC D KR+ Q +P EC Sbjct: 138 YLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAK--------FCDTQGKRWWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKRYSQ-VPPEC 286
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.725e-41 Identity = 79/153 (51.63%), Postives = 100/153 (65.36%), Query Frame = 1 Query: 4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462 +LWFDPT +H+YS+LWN IV VD PIR FKNS+ +GV FP NQPM+IYSSLW+ADDWATRGGL KT+W +APFTASY +F+ D C + + F Q+LD+ RL+WV++ Y +YNYC D R+P P EC Sbjct: 140 YLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAF-QDLDALQYRRLRWVRQKYTVYNYCTDKARYPVP-PPEC 290
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.843e-41 Identity = 74/153 (48.37%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462 +LWFDPTADFHTY I+WNPQ I+F VD P+R FK + + A+P+++PMR++++LW+ WATR G VK DW+ APF SYR ++ +ACV N W +ELD + W ++NYM YNYCAD RFPQG PAEC Sbjct: 139 YLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDL--AYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV--NNNPAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAEC 287
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.460e-40 Identity = 80/158 (50.63%), Postives = 99/158 (62.66%), Query Frame = 1 Query: 4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFS----QELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465 +LWFDPT D+H+YS+LWN I F VD TPIR FKNS+ +GV +P +QPM++YSSLWNADDWATRGG KTDW+ APF ASYR F+ D C S W+ Q+LD+ RL WV+K + IYNYC D R+ P EC+ Sbjct: 139 YLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEAS-------AEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAP-ECK 288
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 5.549e-40 Identity = 80/158 (50.63%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQ----ELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465 +LWFDPT +FHTYSILW+ + +VF VD TPIR KN E G+ F K+Q M +YSS+WNADDWAT+GGLVKTDW+HAPF ASY+ F DAC + W+ + EL +L WV+ N+MIY+YC DA RFP P EC+ Sbjct: 134 NLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDAC-----EIPTTTDLSKCNGDQKFWWDEPTVSELSLHQNHQLIWVRANHMIYDYCFDATRFPV-TPLECQ 285
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.973e-37 Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 7 LWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESI--GVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQ----ELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECRTS 471 LWFDPT D+HTYSILWN ++VF VD PIR +KNS+ + FP +PM ++SS+WNADDWATRGGL KTDW APF +SY++F + C W + W+ Q L T + WVQ+N ++Y+YC D++RFP LP EC S Sbjct: 136 LWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKD------PFPACVSTTTENWWDQYDAWHLSKTQKMDYAWVQRNLVVYDYCKDSERFPT-LPWECSIS 289
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 1.973e-37 Identity = 72/158 (45.57%), Postives = 99/158 (62.66%), Query Frame = 1 Query: 4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFS----QELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465 +LWFDP+ D+HTY+ILW+ + IVF VD PIRE+KN+E+ +A+P +QPM +YS+LW ADDWATRGGL K DW+ APF A Y++F+ + C W+ Q L++ R +WV+ N+M+Y+YC D RFP P ECR Sbjct: 143 NLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGC--------PVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVP-PPECR 291
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.291e-36 Identity = 71/156 (45.51%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQER---LKWVQKNYMIYNYCADAKRFPQGLPAEC 462 HLWFDP DFHTYSILWN +IVF VD PIR ++N GVA+P+ QPM + +SLWN + WATRGG K DW+ PF AS+ ++ DAC+W W E S ++ + KWV+K ++IY+YC D RF LP EC Sbjct: 144 HLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDACIWIGN-----TSFCNGESTENWWNKNEFSSLTRVQKRWFKWVRKYHLIYDYCQDYGRFNNKLPKEC 294
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.115e-35 Identity = 67/155 (43.23%), Postives = 96/155 (61.94%), Query Frame = 1 Query: 10 WFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFS----QELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462 WF+PT FH Y+I WNP +V+ VDGTPIR F+N ES G+A+P Q M++++SLWNA+DWAT+GG VKT+WT APF A R + A AC+W K W++ +L ++ +++ ++ +MIY+YC D RF +P EC Sbjct: 136 WFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLW---KGSVSIKQCVDPTIRSNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPEC 287 The following BLAST results are available for this feature:
BLAST of CK939135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939135 ID=CK939135; Name=CK939135; organism=Citrus sinensis; type=EST; length=638bpback to top |