CK939135

Overview
NameCK939135
Unique NameCK939135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 5.030e-33
Identity = 67/157 (42.68%), Postives = 91/157 (57.96%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFS----QELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            +LWFDP+ DFH Y+I WN  RIVF VD  PIR +KN+E+  V +P+ QPM +YS+LW ADDWATRGG+ K +W+ APF A Y++F+ + C                      W+      +L        +WV+ N+M+Y+YC D  RFP   P EC
Sbjct:  142 NLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGC--------PVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVP-PPEC 289          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.337e-30
Identity = 65/152 (42.76%), Postives = 90/152 (59.21%), Query Frame = 1
Query:   10 WFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465
            WFDPT  FHTY ILWNP +IVF VD  PIR FKN +  GV +P ++PM++ +SLWN ++WAT GG  K +W +APF A Y+ F+   C   NG+                    +L +  Q+ ++ V+  YM Y+YC+D  R+P   P+ECR
Sbjct:  141 WFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYP-SKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGC-HVNGQSNNANVCGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSDRPRYPVP-PSECR 289          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.363e-28
Identity = 63/157 (40.13%), Postives = 93/157 (59.24%), Query Frame = 1
Query:    7 LWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFS----QELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAECR 465
            LWFDP+ DFHTY+ILWNP +IV  VD  P+R FKN+ S G+ +P ++PM++  SLWN ++WAT GG  K +W+ APF A+++ FN   C  +  K                W++     +L  + Q+    V++ YM Y+YC+D  RF    P+EC+
Sbjct:  146 LWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEK--------NACGSSAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRF-HVPPSECK 292          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.418e-27
Identity = 61/152 (40.13%), Postives = 87/152 (57.24%), Query Frame = 1
Query:    7 LWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            LWF+PT  +HTY +LWNP +IVF VD  PIR +KN    GV++P ++PM++ +SLWN DDWAT GG  K +W+++PF A +R+F    C   +G+                   Q L    Q+  + V+  YM Y+YC D  ++ Q  P EC
Sbjct:  143 LWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNEN--GVSYP-SKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCN-IDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKY-QTPPREC 289          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.387e-27
Identity = 59/144 (40.97%), Postives = 80/144 (55.56%), Query Frame = 1
Query:    7 LWFDPTADFHTYSILWNPQRIVFSVDGTPIREF-KNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKR 435
            LWFDPT DFH Y+ILWNP +IVF VD  PIR + + +E+I   FP  +PM +Y S+W+A DWAT  G +K D+ + PF A Y+NF    C   +                    ++ L       L W Q+N+++YNYC D KR
Sbjct:  153 LWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNEAI---FP-TRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTADSSSSCRPPSPAPMR-------NRGLSRQQMAALTWAQRNFLVYNYCHDPKR 285          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25
Identity = 55/152 (36.18%), Postives = 89/152 (58.55%), Query Frame = 1
Query:    7 LWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            LWFDP+ +FH YSILW P +I+F VD  PIRE   ++++G  +P  +PM +Y+++W+A DWAT GG  K ++  APF A +++F+ D C     +                 +S  ++S  +  ++  ++ +M Y+YC D  R+P+ LP EC
Sbjct:  145 LWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPA-KPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDCSDSVDFLESQDYS-SINSHQRAAMRRFRQRFMYYSYCYDTLRYPEPLP-EC 293          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.860e-25
Identity = 64/154 (41.56%), Postives = 84/154 (54.55%), Query Frame = 1
Query:    7 LWFDPTADFHTYSILWNPQRIVFSVDGTPIREF-KNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADAC-VWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            LWFDPT DFH Y+ILW+P+ I+F VD  PIR + K S S    FP  +PM +Y S+W+A  WAT  G  K D+ + PFTA Y NF A  C  +S+ +                + S  L     + ++WVQ + M+YNYC D KR    L  EC
Sbjct:  157 LWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSAS---TFPL-RPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGCTAYSSAR--------CYPLSASPYRSGGLTRQQHQAMRWVQTHSMVYNYCKDYKR-DHSLTPEC 297          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.382e-21
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXW---FSQELDSTSQERLK---WVQKNYMIYNYCADAKRFPQGLPAEC 462
            + WFDPT  FH Y+++WN    VF VD  P+R+F N  +   A+P ++PM +Y ++W+  +WAT+GG    ++ +APF  S  +     C  +NG                       Q+  + S+ ++    W ++  M Y+YC+D  R+ + +PAEC
Sbjct:  153 YFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSVNNGSSTGSGPCTKSGGSISSLDPVDGQDFATLSKNQINAMDWARRKLMFYSYCSDKPRY-KVMPAEC 309          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.769e-21
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 1
Query:    7 LWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWS-------NGKXXXXXXXXXXXXXXXXWFSQELDSTSQER---LKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            LWFDP+ +FH YSILW P +I+F VD  PIRE    E +   +P+ +PM +Y+++W+A  WAT GG    D+T +PF + +++   D C  S       N                    S +  + S ++   ++  ++ YM Y+YC D  R+    P EC
Sbjct:  153 LWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQ-KPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGCNVSDSFPGENNNNNIGNYNNINCSVSDQFLMSNDYSTISPKQATAMRRFRERYMYYSYCYDTIRYSVP-PPEC 312          
BLAST of CK939135 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.678e-20
Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 1
Query:    4 HLWFDPTADFHTYSILWNPQRIVFSVDGTPIREFKNSESIGVAFPKNQPMRIYSSLWNADDWATRGGLVKTDWTHAPFTASYRNFNADACVWSNGKXXXXXXXXXXXXXXXXWFSQELDSTSQERLKWVQKNYMIYNYCADAKRFPQGLPAEC 462
            +LWFDPT DFH YSILW+   I+F VD  PIRE K + S+G  FP  +PM +YS++W+   WAT GG    ++ +AP+ + + +     C     +                  + E+  + + +++  ++ +M Y+YC D  R+   L +EC
Sbjct:  143 NLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPA-KPMSLYSTIWDGSKWATDGGKYGVNYKYAPYVSQFTDLILHGCAVDPTEKFPSCKDEAVQNLR---LASEITESQRNKMEIFRQKHMTYSYCYDHMRYKVVL-SEC 290          
The following BLAST results are available for this feature:
BLAST of CK939135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH7_ARATH5.030e-3342.68Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH2_ARATH2.337e-3042.76Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_ARATH6.363e-2840.13Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH2.418e-2740.13Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH31_ARATH5.387e-2740.97Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH1.016e-2536.18Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH3.860e-2541.56Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH3.382e-2130.82Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH29_ARATH5.769e-2132.72Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH1.678e-2032.68Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004433_G08 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939135 ID=CK939135; Name=CK939135; organism=Citrus sinensis; type=EST; length=638bp
GGGCACCTCTGGTTTGACCCCACTGCTGACTTTCACACCTATTCTATCCT
CTGGAATCCTCAGCGCATTGTCTTCTCTGTGGATGGTACTCCCATAAGAG
AGTTCAAGAACTCAGAGTCAATTGGAGTTGCATTCCCAAAGAATCAGCCA
ATGAGAATATACTCATCTCTCTGGAATGCTGATGACTGGGCTACAAGAGG
TGGCCTTGTCAAGACAGATTGGACGCATGCTCCCTTCACGGCTTCCTACA
GAAACTTCAACGCTGATGCCTGTGTCTGGTCTAATGGAAAATCTTCTTGC
GCTTCAAGTTCACCTTCCTCTCCATCCAGCAGCAGTGCCTGGTTCTCACA
AGAGCTTGATTCAACAAGTCAAGAAAGGCTGAAATGGGTGCAGAAGAATT
ACATGATTTACAATTATTGCGCTGATGCAAAGAGATTTCCCCAGGGACTC
CCTGCAGAATGCAGAACCTCTTAGAAGTTTTGCAAAATCAACACATACAT
CAAAAAAATTTATTCTTTTTGTCAATTCTTTGATTCTTTGTTGTATTTTG
TCGTCAATAAAATGGCAAATTAGTCCAACTTTCTCAATGTAATACAAAAT
TTAGCATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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