CK939126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14 Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 581 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742 K E+R++ +GLD AGKTTIL+KLK E + IPTIGF VETVEYKN+ FT+WDV Sbjct: 382 KMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDV 435
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARD1_MOUSE (GTP-binding protein ARD-1 OS=Mus musculus GN=Trim23 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14 Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 581 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742 K E+R++ +GLD AGKTTIL+KLK E + IPTIGF VETVEYKN+ FT+WDV Sbjct: 402 KMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDV 455
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARD1_HUMAN (GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM23 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14 Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 581 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742 K E+R++ +GLD AGKTTIL+KLK E + IPTIGF VETVEYKN+ FT+WDV Sbjct: 402 KMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDV 455
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742 MGL F KL+S LF +E ++++VGLD AGKTTILY+ + E+V T PTIG VE + KN F +WD+ Sbjct: 1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDI 67
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742 MGL F KL+S LF +E ++++VGLD AGKTTILY+ + E+V T PTIG VE + KN F +WD+ Sbjct: 1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDI 67
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARL14_HUMAN (ADP-ribosylation factor-like protein 14 OS=Homo sapiens GN=ARL14 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.456e-12 Identity = 33/54 (61.11%), Postives = 45/54 (83.33%), Query Frame = 2 Query: 584 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEY-KNISFTVWDV 742 K+ ++L++GLD+AGK+T+LYKLKL + +TTIPTIGF VE +E +N S TVWDV Sbjct: 12 KQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELERNFSLTVWDV 65
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARL5_CAEEL (ADP-ribosylation factor-like protein 5 OS=Caenorhabditis elegans GN=arl-5 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.438e-11 Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 2 Query: 539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742 MGL KLF + K+ +I++VGLD AGKTTILY + V T PTIG VE V Y+N+ F +WD+ Sbjct: 1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDI 68
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.438e-11 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742 MG+ FT+++ RLF +E ++++VGLD AGKTTILY+ + E+V T PTIG VE + N F +WD+ Sbjct: 1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDI 67
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.438e-11 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742 MG+ FT+++ RLF +E ++++VGLD AGKTTILY+ + E+V T PTIG VE + N F +WD+ Sbjct: 1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDI 67
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.438e-11 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742 MG+ FT+++ RLF +E ++++VGLD AGKTTILY+ + E+V T PTIG VE + N F +WD+ Sbjct: 1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDI 67 The following BLAST results are available for this feature:
BLAST of CK939126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939126 ID=CK939126; Name=CK939126; organism=Citrus sinensis; type=EST; length=743bpback to top |