CX078338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_ASPNC (ATP-dependent RNA helicase ded1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ded1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.999e-13 Identity = 47/123 (38.21%), Postives = 60/123 (48.78%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGY 371 ++ HVINYD+P +I++YVHRIGRTGR G TGIAT F N+ + + DL LL+EA Q +P L + SG G GG G R R + M FG Y Sbjct: 517 NVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRG-NRGVVRDLIDLLKEAHQEVPSFLESI---------AREGSGYGG---RGGRGGRGRGANATRDMRRMGGGMGGPPSFGGSSY 626
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_EMENI (ATP-dependent RNA helicase ded1 OS=Emericella nidulans GN=ded1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.611e-13 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++ HVINYD+P +I++YVHRIGRTGR G TGIAT F N+ + + DL LL+EA Q +P L + Sbjct: 514 NVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRG-NRGVVRDLIDLLKEAHQEVPSFLESI 579
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_ASPTN (ATP-dependent RNA helicase ded1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ded1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.611e-13 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++ HVINYD+P +I++YVHRIGRTGR G TGIAT F N+ + + DL LL+EA Q +P L + Sbjct: 516 NVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRG-NRGVVRDLIDLLKEAHQEVPTFLESI 581
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DDX3Y_MOUSE (ATP-dependent RNA helicase DDX3Y OS=Mus musculus GN=Ddx3y PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 2.611e-13 Identity = 50/134 (37.31%), Postives = 68/134 (50.75%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHR-IRDCPKLEH--------QKSMAIASSRRDYFGSGGYRG 377 +++HVIN+D+P++IE YVHRIGRTGR G G+AT+F N+ T DL LL EAKQ +P L + + ++ G + GG G R R + S + SS FG GGY G Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNIT-KDLLDLLVEAKQEVPSWLESM---AYEHHYKGSSRGRSKSRFSGGFGARDYRQSSGSANAGFNSNRANSSRSSGSSHNRGFGGGGYGG 637
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DDX3L_MOUSE (Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus GN=D1Pas1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.611e-13 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGG 368 +++HVIN+D+P++IE YVHRIGRTGR G G+AT+F N+ T DL LL EAKQ +P + L + + + G + GG G RD + S + +S R SGG Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINIT-KDLLDLLVEAKQEVP---SWLENMAFEHHYKGGSRGRSKSRFSGGFG--ARDYRQSSGASSSSFSSGRASNSRSGG 623
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_SCLS1 (ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=ded1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++ HV+NYD+P +I++YVHRIGRTGR G TGI+T F N+ + + DL LL+EA Q IP L + Sbjct: 513 NVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGISTAFFNRG-NRGVVRDLIELLKEANQEIPAFLENI 578
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_GIBZE (ATP-dependent RNA helicase DED1 OS=Gibberella zeae GN=DED1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13 Identity = 48/126 (38.10%), Postives = 64/126 (50.79%), Query Frame = 3 Query: 6 IQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDY--FGSGGYRG 377 + HVINYD+P ++++YVHRIGRTGR G TGIAT F N+ + + +L LL+EA Q +P L + I S G GG G R R + RD+ FG GG+ G Sbjct: 514 VTHVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRG-NRGIVRELMDLLKEANQEVPAFL----------ETIARESSFGG----GGRGGRSRG--------GGGRGGATRDFRKFGGGGFGG 616
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_BOTFB (ATP-dependent RNA helicase ded1 OS=Botryotinia fuckeliana (strain B05.10) GN=ded1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 +++HV+NYD+P +I++YVHRIGRTGR G TGI+T F N+ + DL LL+EA Q IP L + Sbjct: 513 NVKHVVNYDLPTDIDDYVHRIGRTGRAGNTGISTAFFNRG-NRGVCRDLIELLKEANQEIPSFLENI 578
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_NEUCR (ATP-dependent RNA helicase ded-1 OS=Neurospora crassa GN=ded-1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVL 194 ++ HVINYD+P +I++YVHRIGRTGR G TGIAT F N+ + + +L LL+EA Q +P L Sbjct: 521 NVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRG-NRGVVRELLELLKEANQEVPAFL 583
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_AJECN (ATP-dependent RNA helicase DED1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DED1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13 Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++ HVINYD+P EI++YVHRIGRTGR G TGI+T F +++++ L LL++A Q +P L +L Sbjct: 529 NVTHVINYDLPNEIDDYVHRIGRTGRAGNTGISTAFFSRSKNFKIARSLVDLLKDANQEVPDFLEKL 595 The following BLAST results are available for this feature:
BLAST of CX078338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078338 ID=CX078338; Name=CX078338; organism=Citrus sinensis; type=EST; length=500bpback to top |