CX078338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_PICGU (ATP-dependent RNA helicase DED1 OS=Pichia guilliermondii GN=DED1 PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 5.816e-13 Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELN 206 ++ HV+NYD+P +I++YVHRIGRTGR G GIAT F N+N + + + LL EA Q +P L +++ Sbjct: 494 NVSHVVNYDLPGDIDDYVHRIGRTGRAGNVGIATAFFNRN-NRNVVKGMIELLSEANQEVPDFLQKIS 560
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_ASPFU (ATP-dependent RNA helicase ded1 OS=Aspergillus fumigatus GN=ded1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.816e-13 Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++ HVINYD+P +I++YVHRIGRTGR G TGIAT F N++ + + +L LL+EA Q +P L + Sbjct: 518 NVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRS-NRGVVRELIDLLKEAHQEVPSFLESI 583
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_NEOFI (ATP-dependent RNA helicase ded1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ded1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++ HVINYD+P +I++YVHRIGRTGR G TGIAT F N+ + + +L LL+EA Q +P L + Sbjct: 520 NVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRG-NRGVVRELIDLLKEAHQEVPSFLESI 585
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_LODEL (ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus GN=DED1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13 Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++ HVINYD+P++I++YVHRIGRTGR G GIAT F N+N ++ + + LL EA Q +P L ++ Sbjct: 500 NVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRN-NKNIVKGMLDLLTEANQEVPDFLNKI 565
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_KLULA (ATP-dependent RNA helicase DED1 OS=Kluyveromyces lactis GN=DED1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13 Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++ HVIN+D+P +I++YVHRIGRTGR G TG+ATTF N+ ++ +L LL EA Q +P L + Sbjct: 484 NVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRG-NKNVAKELVSLLSEANQEVPSFLTTI 549
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_ASPCL (ATP-dependent RNA helicase ded1 OS=Aspergillus clavatus GN=ded1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++ HVINYD+P +I++YVHRIGRTGR G TGIAT F N+ + + +L LL+EA Q +P L + Sbjct: 519 NVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRG-NRGVVRELIDLLKEAHQEVPSFLESI 584
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DDX3_XENLA (Putative ATP-dependent RNA helicase an3 OS=Xenopus laevis GN=an3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 +++HVIN+D+P++IE YVHRIGRTGR G G+AT+F N+ T DL LL EAKQ +P L + Sbjct: 550 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINIT-KDLLDLLVEAKQEVPSWLENM 615
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_COCIM (ATP-dependent RNA helicase DED1 OS=Coccidioides immitis GN=DED1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++ HV+NYD+P +I++YVHRIGRTGR G TG++T F N+ + + DL LL+EA Q +P L + Sbjct: 504 NVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGLSTAFFNRG-NRGVVRDLIELLKEAHQEVPAFLENI 569
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_CHAGB (ATP-dependent RNA helicase DED1 OS=Chaetomium globosum GN=DED1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.920e-13 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVL 194 ++ HVINYD+P ++++YVHRIGRTGR G TGIAT F N+ + + +L LL+EA Q +P L Sbjct: 524 NVTHVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRG-NRGIVRELLDLLKEANQEVPAFL 586
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: RH52_ARATH (DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana GN=RH52 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.296e-12 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 3 Query: 6 IQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 383 + HV+N+D+P +I++YVHRIGRTGR G +G+AT F N N + T L L+QEA Q +P L SG + GG R ++S + DY+G GG G + Sbjct: 474 VAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNT-TMAKPLAELMQEANQEVPDWLTRYASRASFGGGKNRRSGGR----FGGRDFR---------RESFSRGGGGADYYGGGGGYGGV 585 The following BLAST results are available for this feature:
BLAST of CX078338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078338 ID=CX078338; Name=CX078338; organism=Citrus sinensis; type=EST; length=500bpback to top |