CX078338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DED1_USTMA (ATP-dependent RNA helicase DED1 OS=Ustilago maydis GN=DED1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.430e-12 Identity = 30/61 (49.18%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIP 185 ++ HV+NYD+P+++++YVHRIGRTGR G G AT F N+ ++ + DL LL+EA Q +P Sbjct: 518 NVTHVVNYDLPSDVDDYVHRIGRTGRAGNVGHATAFFNRG-NKNIVRDLIELLKEANQEVP 577
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DBP2_ASPCL (ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus GN=dbp2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.430e-12 Identity = 36/67 (53.73%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 DI HV+NYD P E+Y+HRIGRTGR G G A TF + S+ DL +L EAKQ+I P LAE+ Sbjct: 440 DITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQA-RDLVTILTEAKQQIDPRLAEM 505
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DDX4_MOUSE (Probable ATP-dependent RNA helicase DDX4 OS=Mus musculus GN=Ddx4 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 8.398e-12 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++QHVIN+D+P+ I+ YVHRIGRTGRCG TG A +F + + L +L +A+Q +P L E+ Sbjct: 581 NVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQPLVKVLSDAQQDVPAWLEEI 647
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.398e-12 Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 DI HV+NYD P E+Y+HRIGRTGR G G A TF S+ DL +L EAKQ+I P LAE+ Sbjct: 434 DITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQA-RDLVTILTEAKQQIDPRLAEM 499
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DBP2_CHAGB (ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum GN=DBP2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.398e-12 Identity = 36/67 (53.73%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 +I HV+NYD P E+Y+HRIGRTGR G G A TF + S+ DL +LQEAKQ I P LAE+ Sbjct: 453 NITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQA-RDLVGVLQEAKQHIDPRLAEM 518
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DBP2_ASPFU (ATP-dependent RNA helicase dbp2 OS=Aspergillus fumigatus GN=dbp2 PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 8.398e-12 Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 DI HV+NYD P E+Y+HRIGRTGR G G A TF S+ DL +L EAKQ+I P LAE+ Sbjct: 436 DITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQA-RDLVTILTEAKQQIDPRLAEM 501
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: VASA_DROME (ATP-dependent RNA helicase vasa OS=Drosophila melanogaster GN=vas PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.097e-11 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPKLEHQK 320 +I+HVINYDMP++I++YVHRIGRTGR G G AT+F + + DL +L+ + Q +P L + + N GV G G+ + D +E ++ Sbjct: 557 NIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFLRTCGAGGDGGYSNQNFGGVD----VRGRGNYVGDATNVEEEE 658
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: RH37_ARATH (DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana GN=RH37 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.097e-11 Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 3 Query: 6 IQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRG 377 + HV+N+D+P +I++YVHRIGRTGR GK+G+AT F N + + L L+QEA Q +P L + ++ G K G G R + ++ + S R Y G GG G Sbjct: 487 VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNT-SLARPLAELMQEANQEVPEWLTR-------YASRSSFGGGKNRRSGGRFGGR-------DFRREGSFGSGRGGYGGGGGGYG 595
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DDX4_BOVIN (Probable ATP-dependent RNA helicase DDX4 OS=Bos taurus GN=DDX4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.097e-11 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 ++QHVIN+D+P+ I+ YVHRIGRTGRCG TG A +F + L +L +A+Q +P L E+ Sbjct: 610 NVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQPLVKVLSDAQQDVPAWLEEI 676
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DBP2_MAGGR (ATP-dependent RNA helicase DBP2 OS=Magnaporthe grisea GN=DBP2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.097e-11 Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 +I HV+NYD P E+Y+HRIGRTGR G G A TF S+ DL +LQEAKQ I P LAE+ Sbjct: 442 NITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQA-RDLLGVLQEAKQEIDPRLAEM 507 The following BLAST results are available for this feature:
BLAST of CX078338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078338 ID=CX078338; Name=CX078338; organism=Citrus sinensis; type=EST; length=500bpback to top |