CX078338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana GN=RH20 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.285e-11 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 D+++VINYD P +E+YVHRIGRTGR G G A TF + +L ++LQEA Q++ P LA + Sbjct: 412 DVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFA-KELTNILQEAGQKVSPELASM 477
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DBP2_SCLS1 (ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.285e-11 Identity = 43/94 (45.74%), Postives = 50/94 (53.19%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIA-TTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLG 281 +I HV NYD P E+Y+HRIGRTGR G+ G A T F NQ + DL ++L EAKQ I P LAE M G G Y GG G Sbjct: 464 NITHVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITLFTTDNQKQAR--DLVNVLTEAKQVIDPRLAE----MTRFGGGGGGRGYGGRGYGGGRG 551
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DBP2_BOTFB (ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp2 PE=3 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 9.285e-11 Identity = 43/94 (45.74%), Postives = 50/94 (53.19%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIA-TTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLG 281 +I HV NYD P E+Y+HRIGRTGR G+ G A T F NQ + DL ++L EAKQ I P LAE M G G Y GG G Sbjct: 417 NITHVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITLFTTDNQKQAR--DLVNVLTEAKQVIDPRLAE----MTRYGGGGGGRGYGGRGYGGGRG 504
BLAST of CX078338 vs. ExPASy Swiss-Prot
Match: DBP2_AJECN (ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP2 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.285e-11 Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 3 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 203 DI HV+NYD P E+YVHRIGRTGR G G A T + ++ DL +L E+KQ+I P LAE+ Sbjct: 441 DITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAKQA-RDLVAILSESKQQIDPRLAEM 506 The following BLAST results are available for this feature:
BLAST of CX078338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078338 ID=CX078338; Name=CX078338; organism=Citrus sinensis; type=EST; length=500bpback to top |