CK938959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_ARATH (30S ribosomal protein S12, chloroplastic OS=Arabidopsis thaliana GN=rps12-A PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPIRNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_AMBTC (30S ribosomal protein S12, chloroplastic OS=Amborella trichopoda GN=rps12 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPIRNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_AETGR (30S ribosomal protein S12, chloroplastic OS=Aethionema grandiflora GN=rps12-A PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPIRNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_AETCO (30S ribosomal protein S12, chloroplastic OS=Aethionema cordifolium GN=rps12-A PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPIRNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_ACOCL (30S ribosomal protein S12, chloroplastic OS=Acorus calamus GN=rps12-A PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPIRNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12B_OLIPU (30S ribosomal protein S12-B, chloroplastic OS=Olimarabidopsis pumila GN=rps12-B PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPIRNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12A_OLIPU (30S ribosomal protein S12-A, chloroplastic OS=Olimarabidopsis pumila GN=rps12-A PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPIRNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_PLAOC (30S ribosomal protein S12, chloroplastic OS=Platanus occidentalis GN=rps12-A PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.886e-15 Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQP+RNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPVRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_SOYBN (30S ribosomal protein S12, chloroplastic OS=Glycine max GN=rps12-A PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.628e-15 Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPT+KQLIRN RQPIRNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTMKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_RANMC (30S ribosomal protein S12, chloroplastic OS=Ranunculus macranthus GN=rps12-A PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.628e-15 Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPI+NVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIKNVTKSPALRGCPQRRGTCTRVY 38 The following BLAST results are available for this feature:
BLAST of CK938959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938959 ID=CK938959; Name=CK938959; organism=Citrus sinensis; type=EST; length=263bpback to top |