CK938959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_NYMAL (30S ribosomal protein S12, chloroplastic OS=Nymphaea alba GN=rps12-A PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.628e-15 Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQP+RNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPMRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_NUPAD (30S ribosomal protein S12, chloroplastic OS=Nuphar advena GN=rps12-A PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.628e-15 Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQP+RNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPMRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_MORIN (30S ribosomal protein S12, chloroplastic OS=Morus indica GN=rps12-A PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.628e-15 Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPI+NVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIKNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_DRIGR (30S ribosomal protein S12, chloroplastic OS=Drimys granadensis GN=rps12-A PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.628e-15 Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPI+NVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIKNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_ATRBE (30S ribosomal protein S12, chloroplastic OS=Atropa belladonna GN=rps12-A PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.131e-14 Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTI QLIRN RQPIRNVTKSPALRGCPQRRGTCTRVY Sbjct: 1 MPTINQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_NANDO (30S ribosomal protein S12, chloroplastic OS=Nandina domestica GN=rps12-A PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.477e-14 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPI+NVTKSPALRGCPQR+GTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIKNVTKSPALRGCPQRKGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_POPAL (30S ribosomal protein S12, chloroplastic OS=Populus alba GN=rps12-A PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.929e-14 Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPIRNVTKSPAL GCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_PHAVU (30S ribosomal protein S12, chloroplastic OS=Phaseolus vulgaris GN=rps12-A PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.929e-14 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPT+KQLIRN RQPIRNVTKSPAL+GCPQRRGTCTRVY Sbjct: 1 MPTMKQLIRNTRQPIRNVTKSPALQGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_GOSHI (30S ribosomal protein S12, chloroplastic OS=Gossypium hirsutum GN=rps12-A PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.929e-14 Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPIRNVTKSPAL GCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNARQPIRNVTKSPALGGCPQRRGTCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_EUCGG (30S ribosomal protein S12, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rps12-A PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.929e-14 Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTIKQLIRN RQPIRNVTKSPAL GCPQRRGTCTRVY Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVY 38 The following BLAST results are available for this feature:
BLAST of CK938959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938959 ID=CK938959; Name=CK938959; organism=Citrus sinensis; type=EST; length=263bpback to top |