CK938959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_MARPO (30S ribosomal protein S12, chloroplastic OS=Marchantia polymorpha GN=rps12 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.805e-12 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTI+QLIRN RQPI N TKSPAL+GCPQRRG CTRVY Sbjct: 1 MPTIQQLIRNKRQPIENRTKSPALKGCPQRRGVCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_HUPLU (30S ribosomal protein S12, chloroplastic OS=Huperzia lucidula GN=rps12 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.079e-12 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTI+QLIRN RQP+ N TKSPAL+GCPQRRG CTRVY Sbjct: 1 MPTIQQLIRNQRQPVENRTKSPALQGCPQRRGVCTRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_SORBI (30S ribosomal protein S12, chloroplastic OS=Sorghum bicolor GN=rps12-A PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.021e-12 Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPT+KQLIRN RQPIRN KS AL+GCPQRRGTC RVY Sbjct: 1 MPTVKQLIRNARQPIRNARKSAALKGCPQRRGTCARVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_SACOF (30S ribosomal protein S12, chloroplastic OS=Saccharum officinarum GN=rps12-A PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.021e-12 Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPT+KQLIRN RQPIRN KS AL+GCPQRRGTC RVY Sbjct: 1 MPTVKQLIRNARQPIRNARKSAALKGCPQRRGTCARVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_SACHY (30S ribosomal protein S12, chloroplastic OS=Saccharum hybrid GN=rps12 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.021e-12 Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPT+KQLIRN RQPIRN KS AL+GCPQRRGTC RVY Sbjct: 1 MPTVKQLIRNARQPIRNARKSAALKGCPQRRGTCARVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_PSINU (30S ribosomal protein S12, chloroplastic OS=Psilotum nudum GN=rps12-A PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.021e-12 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPTI+QLIRN RQPIR+ TKSPALRGCPQRRG C RVY Sbjct: 1 MPTIQQLIRNARQPIRSRTKSPALRGCPQRRGVCIRVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_ORYSJ (30S ribosomal protein S12, chloroplastic OS=Oryza sativa subsp. japonica GN=rps12-A PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.021e-12 Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPT+KQLIRN RQPIRN KS AL+GCPQRRGTC RVY Sbjct: 1 MPTVKQLIRNARQPIRNARKSAALKGCPQRRGTCARVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_ORYSI (30S ribosomal protein S12, chloroplastic OS=Oryza sativa subsp. indica GN=rps12-A PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.021e-12 Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPT+KQLIRN RQPIRN KS AL+GCPQRRGTC RVY Sbjct: 1 MPTVKQLIRNARQPIRNARKSAALKGCPQRRGTCARVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_ORYSA (30S ribosomal protein S12, chloroplastic OS=Oryza sativa GN=rps12-A PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.021e-12 Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPT+KQLIRN RQPIRN KS AL+GCPQRRGTC RVY Sbjct: 1 MPTVKQLIRNARQPIRNARKSAALKGCPQRRGTCARVY 38
BLAST of CK938959 vs. ExPASy Swiss-Prot
Match: RR12_ORYNI (30S ribosomal protein S12, chloroplastic OS=Oryza nivara GN=rps12 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.021e-12 Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 2 Query: 86 MPTIKQLIRNPRQPIRNVTKSPALRGCPQRRGTCTRVY 199 MPT+KQLIRN RQPIRN KS AL+GCPQRRGTC RVY Sbjct: 1 MPTVKQLIRNARQPIRNARKSAALKGCPQRRGTCARVY 38 The following BLAST results are available for this feature:
BLAST of CK938959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938959 ID=CK938959; Name=CK938959; organism=Citrus sinensis; type=EST; length=263bpback to top |