CK938954

Overview
NameCK938954
Unique NameCK938954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3674 contig Csv1_Contig3674:449..1168. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.694e-38
Identity = 78/220 (35.45%), Postives = 133/220 (60.45%), Query Frame = 2
Query:   17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            +LL+E+  + SCGYE  S WG ++G++Y S+ ED  T FK +H +GWRS+Y  P+RP F G++  NL+D L Q  RW+ G V++  S++CP+ YG   R+  LE  AY +  ++PL + +PL  +  +P +C+L G  + PE+ + +S  F+ +FLS  +  + E+  +G  I  W   ++ W+I  ++  L+     ++  L   + SF+ T+K +D+E
Sbjct:  740 SLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFK-MHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTS-IPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEE 957          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.774e-38
Identity = 78/221 (35.29%), Postives = 136/221 (61.54%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            + L++E+  + SCGYE  ++WG+++G++Y S+ ED  T FK +HC+GW+SVY  P R  F G++  NL+D L Q  RW+ G V++ +S++CPL Y    R+  LE  AY +  ++P  + +PL  + T+P +C+L G  + P + + +S  F+ +FLS ++  + E+  +G SI+ W   ++ W+I  V+  L+     ++  LG  + +F+ T+K A DE
Sbjct:  728 AALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFK-MHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTIVYPFTS-IPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADE 946          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.408e-38
Identity = 79/224 (35.27%), Postives = 134/224 (59.82%), Query Frame = 2
Query:    8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676
            S ++LL+E+  + SCGYE  + WG+++G++Y S+ ED  T FK +HC GWRS+Y  P+RP F G++  NL+D L Q  RW+ G V++  SK+CPL YG    +  LE  +Y +  ++P  + +PL  + T+P +C+L G  + PE+ + +S  F+ +F+      + E+  +G +I  W   ++ W+I  V+  L+     ++  L   + SF+ T+K  DDE+
Sbjct:  756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSITEDILTGFK-MHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYGGGLKFLERFSYINSIVYPWTS-IPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDEE 977          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37
Identity = 74/220 (33.64%), Postives = 134/220 (60.91%), Query Frame = 2
Query:   17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            +LL+E+  + SCGYE  ++WG ++G++Y S+ ED  T FK +H +GWRS+Y  P+RP F G++  NL+D L Q  RW+ G V++  S++CP+ YG   R+  LE  AY +  ++PL + +PL  +  +P +C+L G  + PE+ + +S  F+ +F+S  +  + E+  +G  I  W   ++ W+I  ++  L+     ++  L   + +F+ T+K +D++
Sbjct:  748 SLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFK-MHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTS-IPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 965          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37
Identity = 81/234 (34.62%), Postives = 139/234 (59.40%), Query Frame = 2
Query:    2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSL--LESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA---DDEQVKLY 688
            + S + LL+E+  + SCGYE  + WG ++G++Y S+ ED  T FK +HC+GWRSVY  P+R  F G++  NL+D L Q  RW+ G V++  S++ PL+YG    +L  LE  +Y +  ++P  + LPL  + T+P +C+L G  + P + + +S  F+ +F+S  +  + E+  +G SI+ W   ++ W+I  V+  L+  +  ++  L   + +F+ T+K     DDE  +LY
Sbjct:  715 SSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFK-MHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTS-LPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELY 946          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37
Identity = 81/234 (34.62%), Postives = 139/234 (59.40%), Query Frame = 2
Query:    2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSL--LESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA---DDEQVKLY 688
            + S + LL+E+  + SCGYE  + WG ++G++Y S+ ED  T FK +HC+GWRSVY  P+R  F G++  NL+D L Q  RW+ G V++  S++ PL+YG    +L  LE  +Y +  ++P  + LPL  + T+P +C+L G  + P + + +S  F+ +F+S  +  + E+  +G SI+ W   ++ W+I  V+  L+  +  ++  L   + +F+ T+K     DDE  +LY
Sbjct:  715 SSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFK-MHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTS-LPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELY 946          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37
Identity = 75/226 (33.19%), Postives = 136/226 (60.18%), Query Frame = 2
Query:    2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG--PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            + S + LL+E+  + SCGYE  ++WG ++G++Y S+ ED  T FK +HC+GWRS+Y  P+RP F G++  NL+D L Q  RW+ G V++  S++ PL YG    ++  LE  AYA+  ++P  + +PL  +  +P +C+L    + P + + +S  F+ +F+S +   + E+  +G SI+ W   ++ W+I  ++  L+  +  ++  L   + +F+ T+K  DD+
Sbjct:  688 SSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFK-MHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTS-IPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDD 911          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37
Identity = 75/223 (33.63%), Postives = 136/223 (60.99%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI--YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676
            STL++E+  + SCGYE  ++WG+++G++Y S+ ED  T FK +HC+GWRS+Y  P RP F G++  NL+D L Q  RW+ G V++ +S++CPL   YG  R+  L+ ++Y +  ++P  + LPL  +  +P +C+L G  + P + ++++  F+ +F+S +   + E+  +G  I+ W   ++ W+I  V+  L+     I+  +   + +F+ T K  DD +
Sbjct:  654 STLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFK-MHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTS-LPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDTE 874          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37
Identity = 75/223 (33.63%), Postives = 136/223 (60.99%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI--YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676
            STL++E+  + SCGYE  ++WG+++G++Y S+ ED  T FK +HC+GWRS+Y  P RP F G++  NL+D L Q  RW+ G V++ +S++CPL   YG  R+  L+ ++Y +  ++P  + LPL  +  +P +C+L G  + P + ++++  F+ +F+S +   + E+  +G  I+ W   ++ W+I  V+  L+     I+  +   + +F+ T K  DD +
Sbjct:  654 STLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFK-MHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTS-LPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDTE 874          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37
Identity = 73/221 (33.03%), Postives = 135/221 (61.09%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673
            +TLL+E+  + SCGYE  ++WG+++G++Y S+ ED  T FK +H +GW S+Y NP RP F G++  NL+D L Q  RW+ G +++ +S++CP+ YG   R+ LLE +AY +  ++P+ + +PL  +  +P  C++    + PE+ + +S  F+ +F+S     + E+  +G SI+ W   ++ W+I   +  L+     ++  L   + +F+ T+K  D++
Sbjct:  746 ATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITS-IPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDED 964          
The following BLAST results are available for this feature:
BLAST of CK938954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA2_ORYSI1.694e-3835.45Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA7_ORYSJ3.774e-3835.29Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA6_ORYSJ8.408e-3835.27Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA8_ORYSJ1.434e-3733.64Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA9_ORYSJ3.195e-3734.62Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI3.195e-3734.62Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA7_ARATH4.173e-3733.19Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA4_ORYSJ7.118e-3733.63Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI7.118e-3733.63Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA1_ARATH7.118e-3733.03Cellulose synthase A catalytic subunit 1 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_B05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938954 ID=CK938954; Name=CK938954; organism=Citrus sinensis; type=EST; length=720bp
TAATGATTCATCAAGCACTTTGCTACAAGAGAGCAAATTTTTGGCCTCAT
GTGGCTATGAAAGTAACTCAAAATGGGGTGAAAAGGTTGGTTTTATGTAT
CATTCTCTTGTTGAAGATTACTTCACGNGATTTAAACAACTACACTGCAA
AGGATGGAGATCGGTGTATCTTAACCCGGAAAGGCCGCAATTTTTGGGCA
CTTCTACAACAAACTTAAATGACTCGTTGGTTCAAGGCACGAGATGGAGT
TCGGGATTGGTTCAAGTAGCAATCTCAAAGTATTGCCCTCTGATATATGG
ACCACCGAGGATGTCTTTGCTTGAAAGCATGGCCTATGCTGACCTTGGAA
TGTTCCCTCTTCTTAATTGCTTGCCTCTGTGGTGCTTTGCCACTGTCCCT
CATCTCTGCGTATTGCATGGCATCCCATTGTACCCTGAGGTTTTAAGTTC
ATCTTCCCCCATATTCGTATTCGTTTTCCTATCGGCGCTTTCTAAACATC
TATACGAGGTTCTTTCAACTGGTGGATCAATCAAGATATGGAGAAATGAA
CAGAGAATATGGATGATAAGGGCAGTCACATGCCAACTTTATGGAAGCTT
AAATGCCATTATGCACAAGCTTGGCTTAGCTGAAGCCAGTTTCTCGGCCA
CAAATAAAGTCGCGGATGATGAACAAGTGAAGCTCTACGGAATGGGCAAG
TTCGATTTCCGAACATCAAA
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