CK938954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.694e-38 Identity = 78/220 (35.45%), Postives = 133/220 (60.45%), Query Frame = 2 Query: 17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673 +LL+E+ + SCGYE S WG ++G++Y S+ ED T FK +H +GWRS+Y P+RP F G++ NL+D L Q RW+ G V++ S++CP+ YG R+ LE AY + ++PL + +PL + +P +C+L G + PE+ + +S F+ +FLS + + E+ +G I W ++ W+I ++ L+ ++ L + SF+ T+K +D+E Sbjct: 740 SLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFK-MHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTS-IPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEE 957
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.774e-38 Identity = 78/221 (35.29%), Postives = 136/221 (61.54%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673 + L++E+ + SCGYE ++WG+++G++Y S+ ED T FK +HC+GW+SVY P R F G++ NL+D L Q RW+ G V++ +S++CPL Y R+ LE AY + ++P + +PL + T+P +C+L G + P + + +S F+ +FLS ++ + E+ +G SI+ W ++ W+I V+ L+ ++ LG + +F+ T+K A DE Sbjct: 728 AALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFK-MHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTIVYPFTS-IPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADE 946
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.408e-38 Identity = 79/224 (35.27%), Postives = 134/224 (59.82%), Query Frame = 2 Query: 8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676 S ++LL+E+ + SCGYE + WG+++G++Y S+ ED T FK +HC GWRS+Y P+RP F G++ NL+D L Q RW+ G V++ SK+CPL YG + LE +Y + ++P + +PL + T+P +C+L G + PE+ + +S F+ +F+ + E+ +G +I W ++ W+I V+ L+ ++ L + SF+ T+K DDE+ Sbjct: 756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSITEDILTGFK-MHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYGGGLKFLERFSYINSIVYPWTS-IPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDEE 977
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37 Identity = 74/220 (33.64%), Postives = 134/220 (60.91%), Query Frame = 2 Query: 17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673 +LL+E+ + SCGYE ++WG ++G++Y S+ ED T FK +H +GWRS+Y P+RP F G++ NL+D L Q RW+ G V++ S++CP+ YG R+ LE AY + ++PL + +PL + +P +C+L G + PE+ + +S F+ +F+S + + E+ +G I W ++ W+I ++ L+ ++ L + +F+ T+K +D++ Sbjct: 748 SLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFK-MHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTS-IPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 965
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37 Identity = 81/234 (34.62%), Postives = 139/234 (59.40%), Query Frame = 2 Query: 2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSL--LESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA---DDEQVKLY 688 + S + LL+E+ + SCGYE + WG ++G++Y S+ ED T FK +HC+GWRSVY P+R F G++ NL+D L Q RW+ G V++ S++ PL+YG +L LE +Y + ++P + LPL + T+P +C+L G + P + + +S F+ +F+S + + E+ +G SI+ W ++ W+I V+ L+ + ++ L + +F+ T+K DDE +LY Sbjct: 715 SSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFK-MHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTS-LPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELY 946
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37 Identity = 81/234 (34.62%), Postives = 139/234 (59.40%), Query Frame = 2 Query: 2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSL--LESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVA---DDEQVKLY 688 + S + LL+E+ + SCGYE + WG ++G++Y S+ ED T FK +HC+GWRSVY P+R F G++ NL+D L Q RW+ G V++ S++ PL+YG +L LE +Y + ++P + LPL + T+P +C+L G + P + + +S F+ +F+S + + E+ +G SI+ W ++ W+I V+ L+ + ++ L + +F+ T+K DDE +LY Sbjct: 715 SSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFK-MHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTS-LPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELY 946
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37 Identity = 75/226 (33.19%), Postives = 136/226 (60.18%), Query Frame = 2 Query: 2 NDSSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG--PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673 + S + LL+E+ + SCGYE ++WG ++G++Y S+ ED T FK +HC+GWRS+Y P+RP F G++ NL+D L Q RW+ G V++ S++ PL YG ++ LE AYA+ ++P + +PL + +P +C+L + P + + +S F+ +F+S + + E+ +G SI+ W ++ W+I ++ L+ + ++ L + +F+ T+K DD+ Sbjct: 688 SSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFK-MHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTS-IPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDD 911
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37 Identity = 75/223 (33.63%), Postives = 136/223 (60.99%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI--YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676 STL++E+ + SCGYE ++WG+++G++Y S+ ED T FK +HC+GWRS+Y P RP F G++ NL+D L Q RW+ G V++ +S++CPL YG R+ L+ ++Y + ++P + LPL + +P +C+L G + P + ++++ F+ +F+S + + E+ +G I+ W ++ W+I V+ L+ I+ + + +F+ T K DD + Sbjct: 654 STLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFK-MHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTS-LPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDTE 874
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37 Identity = 75/223 (33.63%), Postives = 136/223 (60.99%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI--YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQ 676 STL++E+ + SCGYE ++WG+++G++Y S+ ED T FK +HC+GWRS+Y P RP F G++ NL+D L Q RW+ G V++ +S++CPL YG R+ L+ ++Y + ++P + LPL + +P +C+L G + P + ++++ F+ +F+S + + E+ +G I+ W ++ W+I V+ L+ I+ + + +F+ T K DD + Sbjct: 654 STLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFK-MHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTS-LPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDTE 874
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37 Identity = 73/221 (33.03%), Postives = 135/221 (61.09%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYG-PPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDE 673 +TLL+E+ + SCGYE ++WG+++G++Y S+ ED T FK +H +GW S+Y NP RP F G++ NL+D L Q RW+ G +++ +S++CP+ YG R+ LLE +AY + ++P+ + +PL + +P C++ + PE+ + +S F+ +F+S + E+ +G SI+ W ++ W+I + L+ ++ L + +F+ T+K D++ Sbjct: 746 ATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK-MHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITS-IPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDED 964 The following BLAST results are available for this feature:
BLAST of CK938954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938954 ID=CK938954; Name=CK938954; organism=Citrus sinensis; type=EST; length=720bpback to top |