CK938927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938927 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.459e-23 Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 5 FTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 271 FTI G +YF LVL+TN+ G+G + ++S+KGS TGW MSRNWG NWQ L GQ+LSF VT++ G+T+ +V PA WSFG+T+S Q Sbjct: 157 FTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFSTYQ 245
BLAST of CK938927 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 7.130e-23 Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 5 FTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 277 FTINGH YFNLVL+TNV G + ++ + GS T W PM RNWG NW S +YL GQ LSF+VT DG+T+ N+ P+ W FG+T+ S QF+ Sbjct: 188 FTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASKLQFK 280
BLAST of CK938927 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.130e-23 Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 2 Query: 5 FTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 262 FTING +YF LVL+TN+ G+G + ++S+KGS TGW M+RNWG NWQ L GQ+LSF VT++ G+T+ + PA WSFG+T+S Sbjct: 157 FTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 242
BLAST of CK938927 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.216e-22 Identity = 49/93 (52.69%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 5 FTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 277 FTINGH YF LVL+TNV AG + ++ + GS T W PM+RNWG W S YL GQ LSF+VT +D +T+ NV P W FG+T+ S QF+ Sbjct: 175 FTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGWKFGQTFASKLQFK 267
BLAST of CK938927 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.539e-22 Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 5 FTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 262 FT+ G +F LVL+ NV G+G V AVS++G+ TGW MSRNWG NWQS L GQ LSF VTT+ G+ + +VAPA W FG+T+S Sbjct: 163 FTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQTFS 248
BLAST of CK938927 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22 Identity = 46/86 (53.49%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 5 FTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 262 F ING +YF LVL+TN+ G+G + ++S+KGS TGW M+RNWG NWQ L GQ+LSF VT++ G+T+ + PA WSFG+T+S Sbjct: 148 FIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 233
BLAST of CK938927 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 5 FTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 277 FTINGH YF LVL+TNVG AG + A+ +KGS++ W M+ NWG W S YL GQ LSF+VT +DG+T+ NV W FG+T+ S QF+ Sbjct: 170 FTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGWRFGQTFASNIQFK 262
BLAST of CK938927 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.036e-22 Identity = 51/89 (57.30%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 5 FTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 271 FT+ G +YF LVLITNV G+G V + IKG+ TGW MSRNWG NWQS L GQ+LSF VTT+ G+ + +VAPA W FG+T+S Q Sbjct: 164 FTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTFSTYQ 252
BLAST of CK938927 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.345e-21 Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 5 FTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS--GAQF 274 FT+ G FN+V+I+NVGG G V +V+++GS+ W M+RNWG NWQS+ L GQ LSFKVT +D +T T NV P+SW FG+T+S G QF Sbjct: 159 FTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSSRGRQF 251
BLAST of CK938927 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.294e-21 Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 5 FTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSG 265 F G+ YF ++L NVGGAGD+ + +KG +TGW M +NWGQNW + L GQ +SF+VTTSDG T NV P +W FG+T+ G Sbjct: 186 FETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 272 The following BLAST results are available for this feature:
BLAST of CK938927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938927 ID=CK938927; Name=CK938927; organism=Citrus sinensis; type=EST; length=806bpback to top |