CK938922

Overview
NameCK938922
Unique NameCK938922
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938922 vs. ExPASy Swiss-Prot
Match: RALA_DROME (Ras-related protein Ral-a OS=Drosophila melanogaster GN=Rala PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.176e-21
Identity = 54/161 (33.54%), Postives = 98/161 (60.87%), Query Frame = 3
Query:   87 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 566
            K++++G  G GKS+L L+F+  +F+E  E T  A  + + + ++   V+ +I DTAGQE Y ++   Y+R     + V+ IT+  SF+  +++ ++ L+ + + ++   L GNK DL D RKV   E Q  AQ+  + ++ETSAKT  NV+ +F+++ + +
Sbjct:   13 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREI 172          
BLAST of CK938922 vs. ExPASy Swiss-Prot
Match: RABY_DICDI (Ras-related protein RabY OS=Dictyostelium discoideum GN=rabY PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.176e-21
Identity = 51/162 (31.48%), Postives = 95/162 (58.64%), Query Frame = 3
Query:   87 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE--RYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 566
            K+V++GD   GK+ L+ RFV+  + E    T    F  +T+ ++   +K +IWD+   E  R+++     YR A+  ++VYD TN+ SF   K W+++++  G PN +  +  NK+DL++ + + ++ A++Y     + F+ETS+K ++NV D F  + K +
Sbjct:   13 KIVIIGDRKTGKTCLMNRFVENTWSEEYRQTNLLHFKVKTIYIDCKIIKLQIWDSQADENFRFNNNNLSNYRSASGFLVVYDCTNENSFSNLKHWIKDIKLYGRPNAINIVVSNKSDLVNEKVIDSDVAKSYCDSLEIPFIETSSKHSSNVEDCFVLLIKNV 174          
BLAST of CK938922 vs. ExPASy Swiss-Prot
Match: RALB_MACFA (Ras-related protein Ral-B OS=Macaca fascicularis GN=RALB PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.454e-21
Identity = 56/190 (29.47%), Postives = 109/190 (57.37%), Query Frame = 3
Query:   87 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMV-MALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 650
            K++++G  G GKS+L L+F+  +F+E  E T  A  + + + ++   V+ +I DTAGQE Y ++   Y+R     ++V+ IT   SF    ++ ++ L+ +   + + + + GNK+DL + R+V  EEA++ A+E G+ ++ETSAKT  NV+ +F+++ + +   + + N           +++    CC
Sbjct:   16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSENKDKNGKKSGKNKKSFKERCC 204          
BLAST of CK938922 vs. ExPASy Swiss-Prot
Match: RB32A_DICDI (Ras-related protein Rab-32A OS=Dictyostelium discoideum GN=rab32A PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.123e-21
Identity = 71/220 (32.27%), Postives = 109/220 (49.55%), Query Frame = 3
Query:   42 SEHPMATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ------AQGNPNMVMALAGNKADL-LDARKVTAEEAQAYAQENGLF-FMETSAKTATN--------VNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 650
            S +P    G      K++++GD+G GK+S++ RFV   F    +STIG  F  + +  +  T V+ ++WD AGQER+ S+  +YY+ A  A+I +D+T  ++FE   KW  ++       A   P  V+ LA NK DL  DA   TA +   Y ++NG   + ETSAK   N        V+ I     +R   ++    P    L  +P   +   SCC
Sbjct:    2 SNNPADDEGYNEYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDIAGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTYGADEKPIPVVLLA-NKCDLGKDAFIKTANDMDKYCKDNGFIGWFETSAKENMNIEKAARFLVDHILKNDVRRNQPIEGTIQPGD--LNKQPQPTSTGPSCC 218          
BLAST of CK938922 vs. ExPASy Swiss-Prot
Match: RAS3_DROME (Ras-like protein 3 OS=Drosophila melanogaster GN=R PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.123e-21
Identity = 58/166 (34.94%), Postives = 96/166 (57.83%), Query Frame = 3
Query:   87 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQP 581
            K+V+LG  G GKS+L ++FV+  F+E  + TI  ++  Q + V+      EI DTAG E++ ++  +Y +     ++VY IT Q++F   +   ++ L+ +   ++ M L GNK DL + R V  E  +  A +    FMETSAK   NVNDIFY++ +++ +  P
Sbjct:    5 KIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQ-VEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKELGKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQINKKSP 169          
BLAST of CK938922 vs. ExPASy Swiss-Prot
Match: RALB_RAT (Ras-related protein Ral-B OS=Rattus norvegicus GN=Ralb PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.123e-21
Identity = 56/190 (29.47%), Postives = 108/190 (56.84%), Query Frame = 3
Query:   87 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMV-MALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERTASASCC 650
            K++++G  G GKS+L L+F+  +F+E  E T  A  + + + ++   V+ +I DTAGQE Y ++   Y+R     ++V+ IT   SF    ++ ++ L+ +   + + + + GNK+DL + R+V  EEA+  A+E G+ ++ETSAKT  NV+ +F+++ + +   + + N           +++    CC
Sbjct:   16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREIRAKKMSENKDKNGRKSGKSKKSFKERCC 204          
BLAST of CK938922 vs. ExPASy Swiss-Prot
Match: RALA_HUMAN (Ras-related protein Ral-A OS=Homo sapiens GN=RALA PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.123e-21
Identity = 54/161 (33.54%), Postives = 98/161 (60.87%), Query Frame = 3
Query:   87 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 566
            K++++G  G GKS+L L+F+  +F+E  E T  A  + + + ++   V+ +I DTAGQE Y ++   Y+R     + V+ IT   SF     + ++ L+ + + N+   L GNK+DL D R+V+ EEA+  A++  + ++ETSAKT  NV+ +F+++ + +
Sbjct:   16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREI 175          
BLAST of CK938922 vs. ExPASy Swiss-Prot
Match: RAS_BOTFU (Ras-like protein OS=Botryotinia fuckeliana GN=ras1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21
Identity = 54/163 (33.13%), Postives = 94/163 (57.67%), Query Frame = 3
Query:   87 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 572
            KLV++G  G GKS L ++ ++  F++  + TI  ++  Q + +++     ++ DTAGQE Y ++   Y R     ++VY IT++ SFE    + Q+ L+ +      + + GNK DL   R+V+ +E Q  A + G  F+ETSAK+  NV++ FY+I + + R
Sbjct:   10 KLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCV-IDEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLEGERQVSKQEGQQLADDFGCKFIETSAKSRINVDNAFYDIVREIRR 171          
BLAST of CK938922 vs. ExPASy Swiss-Prot
Match: RASG_DICDI (Ras-like protein rasG OS=Dictyostelium discoideum GN=rasG PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21
Identity = 55/161 (34.16%), Postives = 92/161 (57.14%), Query Frame = 3
Query:   87 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 566
            KLV++G  G GKS+L ++ ++  FI+  + TI  ++  Q + +++ T   +I DTAGQE Y ++   Y R     + VY IT+++SF+    + ++ L+ +    + M + GNK DL   R+VT  E Q  A+  G  F+ETSAK   NV + FY + + +
Sbjct:    5 KLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYRKQ-VTIDEETCLLDILDTAGQEEYSAMRDQYMRTGQGFLCVYSITSRSSFDEIASFREQILRVKDKDRVPMIVVGNKCDLESDRQVTTGEGQDLAKSFGSPFLETSAKIRVNVEEAFYSLVREI 164          
BLAST of CK938922 vs. ExPASy Swiss-Prot
Match: RASD_DICDI (Ras-like protein rasD OS=Dictyostelium discoideum GN=rasD PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21
Identity = 56/172 (32.56%), Postives = 97/172 (56.40%), Query Frame = 3
Query:   87 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 599
            KLV++G  G GKS+L ++ ++  FI+  + TI  ++  Q ++++D T   +I DTAGQE Y ++   Y R     + VY IT+++S++    + ++ L+ +    + + L GNKADL   R+V+  E Q  A+     FME+SAK+  NV + FY + + + +       SG
Sbjct:    5 KLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYRKQ-VSIDDETCLLDILDTAGQEEYSAMRDQYMRTGQGFLCVYSITSRSSYDEIASFREQILRVKDKDRVPLILVGNKADLDHERQVSVNEGQELAKGFNCPFMESSAKSRINVEEAFYSLVREIRKELKGDQSSG 175          
The following BLAST results are available for this feature:
BLAST of CK938922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RALA_DROME4.176e-2133.54Ras-related protein Ral-a OS=Drosophila melanogast... [more]
RABY_DICDI4.176e-2131.48Ras-related protein RabY OS=Dictyostelium discoide... [more]
RALB_MACFA5.454e-2129.47Ras-related protein Ral-B OS=Macaca fascicularis G... [more]
RB32A_DICDI7.123e-2132.27Ras-related protein Rab-32A OS=Dictyostelium disco... [more]
RAS3_DROME7.123e-2134.94Ras-like protein 3 OS=Drosophila melanogaster GN=R... [more]
RALB_RAT7.123e-2129.47Ras-related protein Ral-B OS=Rattus norvegicus GN=... [more]
RALA_HUMAN7.123e-2133.54Ras-related protein Ral-A OS=Homo sapiens GN=RALA ... [more]
RAS_BOTFU9.303e-2133.13Ras-like protein OS=Botryotinia fuckeliana GN=ras1... [more]
RASG_DICDI9.303e-2134.16Ras-like protein rasG OS=Dictyostelium discoideum ... [more]
RASD_DICDI9.303e-2132.56Ras-like protein rasD OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_E01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938922 ID=CK938922; Name=CK938922; organism=Citrus sinensis; type=EST; length=842bp
GGGGCTCTAACCCTGCGATCCAATTTTGATCCGGTCTTCGATCAGAGCAC
CCCATGGCCACCACTGGAAACAAAAACATCAATGCTAAATTGGTGCTGCT
TGGAGATGTTGGAGCTGGAAAGTCTAGTCTTGTACTGCGCTTTGTTAAAG
GCCAATTCATTGAGTTTCAGGAATCAACCATTGGAGCTGCCTTTTTCTCA
CAAACATTAGCTGTAAATGATGCTACTGTAAAATTTGAGATTTGGGATAC
AGCAGGACAAGAGAGATACCATAGCTTGGCTCCAATGTACTATAGAGGAG
CTGCCGCAGCAATTATTGTGTACGATATAACAAATCAAGCCTCATTTGAG
CGTGCTAAGAAATGGGTCCAAGAACTTCAGGCACAAGGCAATCCAAATAT
GGTTATGGCACTTGCTGGTAACAAAGCTGACTTGTTGGATGCGAGGAAGG
TCACGGCAGAGGAAGCACAAGCTTATGCCCAGGAAAATGGCCTATTCTTT
ATGGAAACCTCTGCAAAAACAGCAACCAATGTGAATGACATTTTCTATGA
AATAGCAAAGAGATTGCCTCGAGTGCAGCCAGCACCAAATCCATCAGGAA
TGGTTCTTATGGATAGACCTGGGGAAAGGACAGCGAGTGCATCATGTTGC
TCTTAGATACTTGGGTGGTGATGAGCACTGTCTGTTTGTATCTTCTAAAT
GGCTCCTCTAGCTTTACTAGGAACTTTTTGAGTCTTATCCTTCCAAGTTT
GCTATCGTGTATTATTTGTTGAGATATCAGAACTGTACATGCATCTTGCA
TTTGTATGAACTGGTAAATTGAATTGGAGAGTGGCTTCCCTT
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