CK938919

Overview
NameCK938919
Unique NameCK938919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:1..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 6.830e-117
Identity = 212/245 (86.53%), Postives = 223/245 (91.02%), Query Frame = 2
Query:   95 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 829
            MEGKEEDVR+GANKF ERQPIGT+AQ+   KDY EPPPAP FEPGEL SWSF+RAGIAEFIATFLFLYI+VLTVMGV +S   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 242          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 6.830e-117
Identity = 212/245 (86.53%), Postives = 223/245 (91.02%), Query Frame = 2
Query:   95 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 829
            MEGKEEDVR+GANKF ERQPIGT+AQ+   KDY EPPPAP FEPGEL SWSF+RAGIAEFIATFLFLYI+VLTVMGV +S   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 242          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 8.920e-117
Identity = 211/245 (86.12%), Postives = 224/245 (91.43%), Query Frame = 2
Query:   95 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 829
            MEGKEEDVR+GANKF ERQPIGT+AQ+   KDY EPPPAPLFEPGEL SWSF+RAGIAEFIATFLFLYI+VLTVMGV +S   C++VGIQGIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA++Y+VMQCLGAICGAGVVKGF    QY  L GGAN +AHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSD--KDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQ-PKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 242          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 413.305 bits (1061), Expect = 8.349e-115
Identity = 208/245 (84.90%), Postives = 220/245 (89.80%), Query Frame = 2
Query:   95 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 829
            MEGKEEDVRLGAN++ ERQPIGTAAQ  + KDY EPP AP+FE  EL SWSFYRAGIAEF+ATFLFLYIS+LTVMGV KS +KC+TVGIQGIAW+FGGMIF LVYCTAGISGGHINPAVT GLFLARKLSLTRA+FYM MQCLGAICGAGVVKGF   G Y    GGAN V  GYTKGDGLGAEI+GTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA
Sbjct:    1 MEGKEEDVRLGANRYTERQPIGTAAQGAEEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQ-RGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 244          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 406.757 bits (1044), Expect = 7.814e-113
Identity = 206/245 (84.08%), Postives = 218/245 (88.98%), Query Frame = 2
Query:   95 MEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 829
            MEGKEEDVRLGANKF+ER  IGTAAQ  D KDY EPPPAPLFEPGELKSWSFYR GIAEF+ATFLFLYIS+LTVMGV KS +KC+TVGIQGIAW+FGGMI  LVYCTAGIS GHINPAVT GLFLARKLSLTRA+FY++MQCLGAICG GVVKGF   G Y    G  NVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR ARDSHVPILAPLPIGFAVFLVHLAT+ ITGTGINPARSLGA
Sbjct:    1 MEGKEEDVRLGANKFSERHAIGTAAQGTDDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS-GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQ-QGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGA 243          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 394.815 bits (1013), Expect = 3.073e-109
Identity = 196/249 (78.71%), Postives = 216/249 (86.75%), Query Frame = 2
Query:   83 GPAEMEGKEEDVRLGANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 829
            G  +   +EEDVR+G ++F ERQPIGTAA    G+DY EPP APLFE  EL SWSFYRAGIAEF+ATFLFLY++VLTVMGV KS +KC TVGIQGIAWAFGGMIF LVYCTAG+SGGHINPAVT GL LARKLSLTRA++Y+VMQCLGA+CGAGVVK F G+  Y    GGAN V+ GYTKGDGLGAE++GTFVLVYTVFSATDAKR+ARDSHVP LAPLPIGFAVFLVHLATIPITGTGINPARSLGA
Sbjct:    4 GTLQDRSEEEDVRVGVDRFPERQPIGTAADDL-GRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAF-GSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGA 250          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 343.199 bits (879), Expect = 1.061e-93
Identity = 171/225 (76.00%), Postives = 185/225 (82.22%), Query Frame = 2
Query:  155 IGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 829
            +    +T  GKDYV+PPPAPL + GELKSWSFYRA IAEFIAT LFLY++V TV+G  K    C  VG+ GIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL YM+ QCLGAICG G VK FM    Y  L GGAN VA GY+KG  LGAEIIGTFVLVYTVFSATD KRSARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARS GA
Sbjct:    5 VSEEGKTHHGKDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKT-PYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGA 228          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 8.982e-93
Identity = 168/218 (77.06%), Postives = 183/218 (83.94%), Query Frame = 2
Query:  176 QDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 829
            Q GKDYV+PPPAP F+ GELK WSF+RA IAEFIAT LFLYI+V TV+G  K    C++VG+ GIAW+FGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RAL YM+ QC GAICG G+VK FM  G Y +  GGAN VA GY KG   GAE+IGTFVLVYTVFSATD KRSARDSHVPILAPLPIGFAVF+VHLATIPITGTGINPARS GA
Sbjct:   14 QHGKDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFM-KGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGA 230          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 8.407e-91
Identity = 168/216 (77.78%), Postives = 180/216 (83.33%), Query Frame = 2
Query:  182 GKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGA 829
            GKDYV+PPPAPL +  ELK WSFYRA IAEFIAT LFLY++V TV+G       C  VG+ GIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARK+SL RA+ YMV QCLGAICG G+VK FM    Y RL GGAN VA GY+ G  LGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GA
Sbjct:   12 GKDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFM-MTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGA 226          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 1.028e-88
Identity = 161/221 (72.85%), Postives = 178/221 (80.54%), Query Frame = 2
Query:  185 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-------VKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            KDY +PPPAPL +P EL  WS YRA IAEFIAT LFLYI+VLT++G        +  NT+C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFL RK+SL RAL YM+ QC GAICGAG+ KGF  +  Y R  GG N V+ GY KG  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARS G
Sbjct:   17 KDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSF-YNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFG 236          
The following BLAST results are available for this feature:
BLAST of CK938919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
PIP11_VICFA6.830e-11786.53Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH6.830e-11786.53Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_ARATH8.920e-11786.12Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP13_ORYSJ8.349e-11584.90Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP11_MAIZE7.814e-11384.08Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP16_MAIZE3.073e-10978.71Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP27_ARATH1.061e-9376.00Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP1_ATRCA8.982e-9377.06Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP28_ARATH8.407e-9177.78Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP27_MAIZE1.028e-8872.85Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_F11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938919 ID=CK938919; Name=CK938919; organism=Citrus sinensis; type=EST; length=831bp
GGGGGACTCATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAA
GTGCTTCTTATTGACTGTTTTGTGTTTTTGAGGGACCAGCAGAAATGGAA
GGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCA
GCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGC
CCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTT
TACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACAT
CTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAA
CCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTG
CTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGT
GACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTT
TCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTA
AAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAA
CGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTA
TTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAA
CGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATTGG
GTTCGCTGTGTTTTTGGTTCACTTGGCTACCATCCCAATTACCGGAACTG
GCATCAACCCAGCGAGGAGTCTTGGAGCTGC
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