CK938919

Overview
NameCK938919
Unique NameCK938919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.945e-20
Identity = 65/192 (33.85%), Postives = 99/192 (51.56%), Query Frame = 2
Query:  251 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            +R  +AE I TF  + I V +  G  + +       I  IA+ FG  +  L      ISG HINPAVT+G  +  ++S+ +++ Y+ +QC+GAI GA V+K  +     G L  G +  +   T G  +  E + TF+LV  V   +D  R    + +   APL +G ++   HL  I +TG  +NPARS G
Sbjct:   23 WRQLMAELIGTFFLVVIGVGSCTGGSEWSPS-----IPQIAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSG-LDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGR----TDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFG 204          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.259e-19
Identity = 71/199 (35.68%), Postives = 101/199 (50.75%), Query Frame = 2
Query:  254 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG------AEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            RA I+EFIAT +F++ +  +V+ + K     ST G +  +A A    + V V     ISGGH+NPAVT G  +  ++SL RA+ Y V Q LGA+    ++          RLA G  +   G+    G+G       E + TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G
Sbjct:   26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLL----------RLATG-GMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFG 209          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.259e-19
Identity = 71/204 (34.80%), Postives = 102/204 (50.00%), Query Frame = 2
Query:  224 PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV--GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            PGEL      +A +AEFI+  +F++    + M   K      T   G+   + A    +FV V   A ISGGH+NPAVT G F+   +SL +A+ Y V Q LG++    ++K   G    G  +  A V A      + +  EI+ TF LVYTV+ +A D K+      + ++AP+ IGF V    LA     G  +NPA S G
Sbjct:   11 PGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGA-----WNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFG 205          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.950e-19
Identity = 70/203 (34.48%), Postives = 107/203 (52.71%), Query Frame = 2
Query:  254 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK----GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            RA +AEF++TF+F++    +++ + K      ++T  +T G +  +A A    +F  V     +SGGH+NPAVT    +  ++S+ RA++Y V Q +GAI    +++    G    G +         VA G ++  GL  EII TF LVY V+S A D KR +    + I+APL IG  V    L   P  G  +NPAR+ G
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH---------VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFG 213          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.950e-19
Identity = 62/192 (32.29%), Postives = 97/192 (50.52%), Query Frame = 2
Query:  251 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            +R  + E + TF  +++ V        S T  S   +  IA+ FG  +  +      +SG HINPAVTLG  +  ++S+ +A FY+++QC+GAI GA V+K  +     G L  G +           +  E + TF+LV+ V + +D  R      +   APL +G A+   HL  I ++G  +NPARS G
Sbjct:   23 WRMLLGELVGTFFLIFVGV-------GSTTSGS---VPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDL--GVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFG 198          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.853e-19
Identity = 69/194 (35.57%), Postives = 103/194 (53.09%), Query Frame = 2
Query:  254 RAGIAEFIATFLFLYISVLTVMGV--VKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            +A +AEFIAT LF++  V + +    +         G+  IA A    +FV V   A ISGGH+NPAVT GL +   +++   + Y V Q LGA     +++ ++  GQ     G       G ++ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQ-YVTHGQAIPTHG-----VSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFG 202          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.033e-19
Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2
Query:  353 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG--------AEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 820
            +G  G++ AFG  +  ++Y    ISGGH NPAVT+GL+   +      + Y++ Q +G I  A V+   + +GQ G  A  +   ++G+ +    G        AEI+ T + +  +  ATD +        P  APL IG A+ L++L +IPIT T +NPARS
Sbjct:   34 IGFVGVSLAFGLTVLTMIYAVGHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLY-VIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLTAIFLIVIIGATDRRAP------PGFAPLAIGLALVLINLISIPITNTSVNPARS 190          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.573e-19
Identity = 66/196 (33.67%), Postives = 99/196 (50.51%), Query Frame = 2
Query:  254 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV----GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            RA I+EFIAT +F++ +  +V+ + K     ST+    G+  +A A    + V V     +SGGH+NPAVT G  +  ++SL RA+ Y   Q LGA+    +++   G  +    A     +A G   G  +  E + TF  VY  + +  D KR     H+  +APL +GF +    LA  P  G G+NPAR  G
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFA-----LASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFG 214          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.573e-19
Identity = 67/193 (34.72%), Postives = 99/193 (51.30%), Query Frame = 2
Query:  254 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            RA I+EF+AT +F++ +  +++ + K     ST G +  ++ A    + V V     ISGGH+NPA+T G  L  +LSL RALFY + Q LGA+    +++   G  +    A     +A G      +  E   TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G
Sbjct:   27 RAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFA-----LASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFG 210          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.584e-19
Identity = 70/202 (34.65%), Postives = 97/202 (48.02%), Query Frame = 2
Query:  266 AEFIATFLFLYISVLTVMG--VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAIC-----------GAG--VVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            AEF+ TF      VL   G  V+ +      +G  G+A AFG  +  + Y    ISG H+NPAV++GL+   +    +   Y+V Q LGAI            GAG  V KGF   G      GG +++A        L  E++ T   +  +  ATD +  A        APL IG A+ L+HL +IP+T T +NPARS G
Sbjct:    6 AEFLGTFWL----VLGGCGSAVLAAGFPNLGIGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPGGYSLLA-------ALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTG 190          
The following BLAST results are available for this feature:
BLAST of CK938919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
AQP_HAEIX5.945e-2033.85Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
TIP31_MAIZE2.259e-1935.68Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP12_ORYSJ2.259e-1934.80Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP32_ARATH2.950e-1934.48Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
AQP_DROME2.950e-1932.29Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIP23_MAIZE3.853e-1935.57Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
AQPZ_PHOLL5.033e-1934.15Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
TIP32_MAIZE6.573e-1933.67Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP31_ORYSJ6.573e-1934.72Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
AQPZ_CHRVO8.584e-1934.65Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_F11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938919 ID=CK938919; Name=CK938919; organism=Citrus sinensis; type=EST; length=831bp
GGGGGACTCATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAA
GTGCTTCTTATTGACTGTTTTGTGTTTTTGAGGGACCAGCAGAAATGGAA
GGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCA
GCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGC
CCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTT
TACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACAT
CTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAA
CCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTG
CTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGT
GACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTT
TCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTA
AAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAA
CGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTA
TTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAA
CGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATTGG
GTTCGCTGTGTTTTTGGTTCACTTGGCTACCATCCCAATTACCGGAACTG
GCATCAACCCAGCGAGGAGTCTTGGAGCTGC
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