CK938919

Overview
NameCK938919
Unique NameCK938919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.874e-14
Identity = 61/193 (31.61%), Postives = 86/193 (44.56%), Query Frame = 2
Query:  263 IAEFIATFLFLYISVLTVMGVVKSN-TKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQY----GRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            I + IA     Y  +    G V  N +K   +   G+A  +G  + V+VY    ISG H NPAVTL     R+    +   Y   Q LGA   AG ++  M  G++    G L  G++V          L  E I TF L++ +       R+  +     LA L +G  + L  L   PI+G  +NPARSLG
Sbjct:   47 IQKIIAEIFGTYFLIFAGCGAVTINQSKNGQITFPGVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLR-LMFGGRHEHFPGTLPAGSDV--------QSLVLEFIITFYLMFVISGVATDNRAIGE-----LAGLAVGATILLNVLIAGPISGASMNPARSLG 225          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.366e-14
Identity = 68/201 (33.83%), Postives = 97/201 (48.26%), Query Frame = 2
Query:  239 SW--SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA--NVVAHGYTKGDGLGAEIIGTFVLVYTV-FSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            SW   F +  + E + + LF++I  L+V   +++ T     G+   A A G  + +++     ISGGH NPAV+L   L   L+L   L Y V Q LG + GA + K      ++   +G A   V   G   G  L AEII T +L   V   A + K          LAP  IGFAV +  LA  P++G  +NPAR+ G
Sbjct:   29 SWYERFVQPCLVELLGSALFIFIGCLSV---IENGTD---TGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAG-ALVAEIILTTLLALAVCMGAINEKTKGP------LAPFSIGFAVTVDILAGGPVSGGCMNPARAFG 216          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.314e-14
Identity = 63/194 (32.47%), Postives = 95/194 (48.97%), Query Frame = 2
Query:  263 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIF-VLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG-----LGAEIIGTFVLVY-TVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 823
            I+E +ATFL ++++        + N + S +G Q +A   GG+I  V++Y T  ISG H+NPAVTL     R     +  FY   Q  GA+C A V+K  +             +   G T   G     L  EI+ TF +++ T   ATD++       V  LA L +G AV +  +   P++G  +NPAR+L
Sbjct:   58 ISEVVATFLLVFVTCGAASIYGEDNARISQLG-QSVA---GGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVL-----------QPIAVIGTTTPSGPHWHALAIEIVVTFNMMFVTCAVATDSRA------VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTL 230          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13
Identity = 61/198 (30.81%), Postives = 92/198 (46.46%), Query Frame = 2
Query:  248 FYRAGIAEFIATFLFLYI---SVLTVMGVVKSNTK--CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            F R  +AEF  T   +YI   S L     V       C    +QG A+A       +++  +GISG  +NPAVT+G     ++ +   + +++ QC+GA+ GAG++K  +       L+  A  +A G     G   E++ T  LV+ V     A  +  D  +  +APL IG AV          TG  +NPARS G
Sbjct:   30 FTRQLLAEFFGTLFVVYIVSGSTLAANFAVSDPIVRVCLICLVQGFAFA------AIIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYERDLS--ATTLATGVNVARGFFLEMVTTSFLVFVVLGV--AVYNEWDPKISRVAPLAIGCAVIAGVGFLNLFTGGSLNPARSFG 217          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.160e-13
Identity = 64/202 (31.68%), Postives = 94/202 (46.53%), Query Frame = 2
Query:  254 RAGIAEFIATFLFLYISVLTVMGVVKSNTK--CSTVG---IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA------RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            R+ +AEFI+TFLF++ +V + +      T    S+ G      +A AFG  +F  V   A +SGGH+NPAVT    +  ++ +  A+FY   Q LGA   A +      AG+          +A   T   G   E + TF+LVYTV    + +  +      R+     L  L +G       LA   +TG  +NPARS G
Sbjct:   20 RSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFG--LFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATF-ACLSLNLFSAGE----EVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFG 214          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.160e-13
Identity = 63/194 (32.47%), Postives = 95/194 (48.97%), Query Frame = 2
Query:  263 IAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIF-VLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG-----LGAEIIGTFVLVY-TVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 823
            I+E +ATFL ++++        + N + S +G Q +A   GG+I  V++Y T  ISG H+NPAVTL     R     +  FY   Q  GA+C A V+K  +             +   G T   G     L  EI+ TF +++ T   ATD++       V  LA L +G AV +  +   P++G  +NPAR+L
Sbjct:   55 ISEVVATFLLVFVTCGAASIYGEDNRRISQLG-QSVA---GGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHP-----------IAVIGTTTPSGPHWHALLIEIVVTFNMMFVTCAVATDSRA------VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTL 227          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.160e-13
Identity = 61/218 (27.98%), Postives = 102/218 (46.79%), Query Frame = 2
Query:  188 DYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYI---SVLTVMGVVKSNTKCSTVG--IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            D ++ P   ++     K    ++   +EF+ T   +Y    SV     V   +   + +G  IQG+A A       L++  +G+SG ++NPAVTL   L+ ++ L  +L+Y+  Q LG I GAG++ G +    Y R+  G   +A G   G     E++ T +L   V     +  +  D  +  +AP  IG A+F+        +G  +NP R LG
Sbjct:   13 DPLKDPSKMIYRRPISKPVKAFKGFFSEFLGTLYLVYFCGGSVCAAFAVAGDSAARALLGGLIQGMALA------ALIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCL-PNMY-RIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGT--SVFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLG 220          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.126e-13
Identity = 72/240 (30.00%), Postives = 109/240 (45.42%), Query Frame = 2
Query:  128 ANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIF-VLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG-----LGAEIIGTFVLVY-TVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            AN   E   IGTA  +     Y +   A +F P  LK        ++E ++TFL ++++            + S +G Q +A   GG+I  V++Y    ISG H+NPAVTL   + R     +  FY   Q  G+IC + V+K  +             +   G T   G     L  EII TF +++ T+  ATD +       V  LA L +G AV +  +    ++G  +NPAR+LG
Sbjct:   11 ANFNNEIHDIGTAQNSSMPPTYYDRSLADIFPPHLLKKV------VSEVVSTFLLVFVTCGAAGIYGSDKDRISQLG-QSVA---GGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGSICASFVLKAVLHP-----------IAVLGTTTPTGPHWHSLVIEIIVTFNMMFVTLAVATDTRA------VGELAGLAVGSAVCITSIFAGAVSGGSMNPARTLG 223          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.126e-13
Identity = 63/204 (30.88%), Postives = 93/204 (45.59%), Query Frame = 2
Query:  263 IAEFIATFLFLY-------ISVLTVMGVVKSNTKCSTVGIQG-------IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG--AGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            IAEFI TF  ++       I+++   G    N     +G+ G       I  AFG  I   +Y    ISG HINPAVT+GL+  +K      + Y++ Q LGA   + +     G  A   G L   A     GY +   + AE +GTF+L+ T+      +R+ +       A + IG  V  +      ITG+ +NPAR+ G
Sbjct:    9 IAEFIGTFFLVFFGAGAAAITLMIASGGTAPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQ--AMLAETVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTIGNITGSSLNPARTFG 205          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.389e-13
Identity = 63/206 (30.58%), Postives = 96/206 (46.60%), Query Frame = 2
Query:  218 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSA-TDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            +EPG L      RA   E + TFLF++I V + +   K+            A A    + V V  TAG  +SGGH+NPAVTL L +   ++L R+  Y+  Q  G+     +++   G       A   + +A G     G+ AE + TF L+  + +   D +R+A     P+L  L +G       +A   +TG  +NPARS G
Sbjct:   18 WEPGCL------RAVAGELLFTFLFVFIGVASTITAGKAAGGAGEAAAVTAA-AMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGA-----ATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANT----VAGGALTGASMNPARSFG 207          
The following BLAST results are available for this feature:
BLAST of CK938919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
NIP11_ORYSJ4.874e-1431.61Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica G... [more]
AQP8_HUMAN6.366e-1433.83Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]
NIP23_MAIZE8.314e-1432.47Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]
AQPB_DICDI1.418e-1330.81Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
TIP51_MAIZE3.160e-1331.68Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
NIP22_MAIZE3.160e-1332.47Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1[more]
AQPA_DICDI3.160e-1327.98Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]
NIP21_MAIZE4.126e-1330.00Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2[more]
AQPM_METTH4.126e-1330.88Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
TIP42_ORYSJ5.389e-1330.58Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_F11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938919 ID=CK938919; Name=CK938919; organism=Citrus sinensis; type=EST; length=831bp
GGGGGACTCATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAA
GTGCTTCTTATTGACTGTTTTGTGTTTTTGAGGGACCAGCAGAAATGGAA
GGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCA
GCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGC
CCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTT
TACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACAT
CTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAA
CCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTG
CTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGT
GACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTT
TCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTA
AAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAA
CGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTA
TTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAA
CGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATTGG
GTTCGCTGTGTTTTTGGTTCACTTGGCTACCATCCCAATTACCGGAACTG
GCATCAACCCAGCGAGGAGTCTTGGAGCTGC
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