CK938919

Overview
NameCK938919
Unique NameCK938919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:1..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.503e-23
Identity = 73/198 (36.87%), Postives = 103/198 (52.02%), Query Frame = 2
Query:  230 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 823
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA+FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLA--VNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVG----TPALSIGFSVALGHLLGIHYTGCSMNPARSL 189          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.671e-22
Identity = 69/197 (35.03%), Postives = 99/197 (50.25%), Query Frame = 2
Query:  230 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 820
            E +S+SF+RA  AEF  T  +++  +   +             +  IA AFG ++  +V     +SG HINPAVT    +  ++SL RA+FY+  Q LGA+ GA V+ G   A   G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L IGF++ L HL  +  TG  +NPARS
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASL-----KWAAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLA--LNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARS 188          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.671e-22
Identity = 74/198 (37.37%), Postives = 102/198 (51.52%), Query Frame = 2
Query:  230 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 823
            EL+S +F RA +AEF+AT LF++  + + +         S   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T  LV  +F++TD +RS           L IGF+V L HL  I  TG  +NPARSL
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----QWASSPPSVLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLA--VNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSL 189          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.183e-22
Identity = 73/198 (36.87%), Postives = 102/198 (51.52%), Query Frame = 2
Query:  230 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 823
            EL+S +F RA +AEF+AT LF++  + + +         S   +  IA AFG  I +LV     +SG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++         G LA   N + +  T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----QWASSPPSVLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLA--VNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSL 189          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.863e-22
Identity = 70/197 (35.53%), Postives = 99/197 (50.25%), Query Frame = 2
Query:  230 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 820
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA+ YM  Q LGA+ GA V+     A   G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L HL  +  TG G+NPARS
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLA--LNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARS 188          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.083e-21
Identity = 75/210 (35.71%), Postives = 107/210 (50.95%), Query Frame = 2
Query:  218 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            F  G LK++      +AEFIAT LF++  V + +   K  ++      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFG 203          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.083e-21
Identity = 75/210 (35.71%), Postives = 107/210 (50.95%), Query Frame = 2
Query:  218 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            F  G LK++      +AEFIAT LF++  V + +   K  ++      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFG 203          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.083e-21
Identity = 61/164 (37.20%), Postives = 90/164 (54.88%), Query Frame = 2
Query:  353 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV----KGFMGAGQYGRLA--GGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            +G+ G+A+AFG  +  + +    ISG H+NPAV+ GL +  +      L Y++ Q +GAI  AGV+     G  G      LA  G A+    GYT G G  +E++ T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G
Sbjct:   35 IGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTG 192          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.083e-21
Identity = 70/201 (34.83%), Postives = 104/201 (51.74%), Query Frame = 2
Query:  245 SFYRAGIAEFIATF-LFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAH------GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            S  +  +AEFI TF L L      V+     N     +G  G++ AFG  +  + +    ISG HINPAV++GL+ A++   T  L Y+  Q LG I GAGV+    G      L+GG     +      GYT    L  E++ TF+ +  +  +TD +R+ +       AP+ IG ++ L+HL +IP+T T +NPARS G
Sbjct:    2 SLVKRSVAEFIGTFWLVLGGCGAAVLAAAFPNLG---IGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGAGVLYLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTD-RRAPKG-----FAPIAIGLSLTLIHLISIPVTNTSVNPARSTG 193          
BLAST of CK938919 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.415e-21
Identity = 70/194 (36.08%), Postives = 101/194 (52.06%), Query Frame = 2
Query:  254 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 826
            +A +AEFI+T +F++  V + +   K          G+  +A   G  +FV V   A ISGGH+NPAVT GL L  ++++   +FY + Q LGAI GA +V+   G         G           +G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L   P +G  +NPARS G
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGAF-------EGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFG 202          
The following BLAST results are available for this feature:
BLAST of CK938919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
AQP2_BOVIN7.503e-2336.87Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
MIP_RANPI1.671e-2235.03Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP2_MOUSE1.671e-2237.37Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
AQP2_RAT2.183e-2236.87Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
MIP_RABIT4.863e-2235.53Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
TIP2_TOBAC1.083e-2135.71Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC1.083e-2135.71Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
AQPZ_PSEPK1.083e-2137.20Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
AQPZ_GLOVI1.083e-2134.83Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]
TIP22_ORYSJ1.415e-2136.08Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_F11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938919 ID=CK938919; Name=CK938919; organism=Citrus sinensis; type=EST; length=831bp
GGGGGACTCATTCTCATCACAACATCAAACGGCCACAAACAAAAAAGCAA
GTGCTTCTTATTGACTGTTTTGTGTTTTTGAGGGACCAGCAGAAATGGAA
GGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCA
GCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGC
CCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTT
TACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACAT
CTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAA
CCGTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTG
CTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGT
GACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTT
TCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTA
AAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAA
CGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTA
TTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAA
CGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATTGG
GTTCGCTGTGTTTTTGGTTCACTTGGCTACCATCCCAATTACCGGAACTG
GCATCAACCCAGCGAGGAGTCTTGGAGCTGC
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