CK938916
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_GILMI (60S ribosomal protein L24 OS=Gillichthys mirabilis GN=rpl24 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K ELC FSG KIYPG G R+ R D +VF F N+KC+ F + P ++ WT +Y + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARIDGKVFQFLNAKCESAFLAKRNPRQINWTVLYRRKHKKGQSEEVTKKRTRRAVKFQRAITGASLAEIMAKRNQKPEVRKAQREQAI 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_BRABE (60S ribosomal protein L24 OS=Branchiostoma belcheri GN=RPL24 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K ELC +SG KIYPG G R+ R+D +V+ F N+KC+ F + P ++TWT +Y + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKIELCLYSGYKIYPGHGKRYARTDGRVYTFLNAKCEASFLMKRNPREITWTVLYRRKHKKGQQEEIQKKRSRRTAKFQRAITGASLTEIMAKRNQKPEVRKAQREQAV 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24A_YEAST (60S ribosomal protein L24-A OS=Saccharomyces cerevisiae GN=RPL24A PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14 Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K E+ FSGAKIYPG+G F+R DS++F F NSK F R P ++ WT ++ R I GA+L++I++RR+ KPEVR A RE L Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEVRKANREEKL 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24B_YEAST (60S ribosomal protein L24-B OS=Saccharomyces cerevisiae GN=RPL24B PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14 Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K E+ FSGAKIYPG+G F+R DS++F F NSK F R P ++ WT ++ R I GA+L++I++RR+ KPEVR A RE L Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEVRKANREEKL 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_ICTPU (60S ribosomal protein L24 OS=Ictalurus punctatus GN=rpl24 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14 Identity = 42/109 (38.53%), Postives = 57/109 (52.29%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K ELC FSG KIYPG G + R D +VF F N+KC+ F + P ++ WT +Y + R+I GA+L I +R +KPEVR A RE A+ Sbjct: 1 MKVELCSFSGYKIYPGHGPVYARIDGKVFQFLNAKCESAFLTKRNPRQINWTVLYRRKHKKGQSEEVTKKRTRRAVKFQRAITGASLAEILAKRNQKPEVRKAQREQAI 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_NEUCR (60S ribosomal protein L24 OS=Neurospora crassa GN=rpl-24 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13 Identity = 41/102 (40.20%), Postives = 57/102 (55.88%), Query Frame = 3 Query: 63 FSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 FSG +IYPGKG ++R DS++F F N K + F R P ++ WT +Y R+IVGA+LEVI++RR+ +PE R AAR AA+ Sbjct: 8 FSGQRIYPGKGKLYVRGDSKIFRFQNGKSESLFLQRKNPRRIAWTVLYRRQHKKGISEEVAKKRSRRTVKAQRAIVGASLEVIKERRSMRPEARSAARLAAI 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_SPOFR (60S ribosomal protein L24 OS=Spodoptera frugiperda GN=RpL24 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13 Identity = 42/109 (38.53%), Postives = 55/109 (50.46%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K LC +SG KIYPG G ++ D + F F NSKC+ R P K+TWT +Y Y R+IVGA+L I +R KPEVR A R+ A+ Sbjct: 1 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQTKKRTRRTQKYQRAIVGASLSDIMAKRNMKPEVRKAQRDQAI 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_PLUXY (60S ribosomal protein L24 OS=Plutella xylostella GN=RpL24 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13 Identity = 43/109 (39.45%), Postives = 55/109 (50.46%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K LC +SG KIYPG G ++ D + F F NSKC+ R P K+TWT +Y Y R+IVGA+L I +R KPEVR A RE A+ Sbjct: 1 MKIGLCAYSGYKIYPGHGKTMVKVDGKNFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTRRTQKYQRAIVGASLSDIMAKRNMKPEVRKAQREQAI 109
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_YARLI (60S ribosomal protein L24 OS=Yarrowia lipolytica GN=RPL24 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYXXXXXXXXXXXXXPYS--------RSIVGATLEVIQKRRTEKPEVRDAAR 332 +K EL FSG KIYPG+G F+R DS++F F +SK F R P ++ WT +Y R IVGA+L+VI+++R +PE R+A R Sbjct: 1 MKIELDSFSGNKIYPGRGTLFVRGDSKIFRFYSSKTASLFKQRKNPRRIAWTVLYRRKHKKGITEEVSKKRSRKSVKAVRGIVGASLDVIKEKRNARPETRNATR 105
BLAST of CK938916 vs. ExPASy Swiss-Prot
Match: RL24_DROME (60S ribosomal protein L24 OS=Drosophila melanogaster GN=RpL24 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 40/109 (36.70%), Postives = 56/109 (51.38%), Query Frame = 3 Query: 42 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMY--------XXXXXXXXXXXXXPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 344 +K LC FSG KIYPG G ++ D + F F + KC+R + + P K+TWT +Y + R+IVGA+L I +R KPEVR A R+ A+ Sbjct: 1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEVRKAQRDQAI 109 The following BLAST results are available for this feature:
BLAST of CK938916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938916 ID=CK938916; Name=CK938916; organism=Citrus sinensis; type=EST; length=695bpback to top |