CK938909

Overview
NameCK938909
Unique NameCK938909
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.902e-37
Identity = 95/251 (37.85%), Postives = 135/251 (53.78%), Query Frame = 2
Query:   11 DVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 757
            DV +  IA  TPGF+G                 G   +SS++++ + DRIV G E  T+     SK L AYHE GHAI    T G  P+ K T++PRG A G+   +PS+D T +SK+QL AR+   +GGR AEE+IFG   +TTGA+ DL Q T LA+ MV++ GMSE IGP               +  +   S  +   IDA V +L   AYE   S ++ + + +  +   LLE ET++ ++ + IL
Sbjct:  549 DVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDRIVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMVTQLPSNDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSEAIGP---------------VHIKERPSSDMQSRIDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYETLTAEDIKRIL 784          
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.163e-36
Identity = 94/250 (37.60%), Postives = 141/250 (56.40%), Query Frame = 2
Query:   11 DVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMT-DGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAI 754
            DV L ++A +TPGF G               RR K+ I + +ID++ DR++AG      T   K + LVAYHE GH I G +      V KVT+VPRG+A G    +P +D  L+SK+ +  ++ G +GGR AEE+IF     TTGA+ D +Q T +A+ MVT +GMSE +GP    +G+ +  ++     + S+SE+ A +ID  V+ L + A   A   I++NRE    I E LL+ ET+   + +A+
Sbjct:  378 DVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMSEKLGPVQ-YEGNHA--MLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKAL 622          
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 1.163e-36
Identity = 94/250 (37.60%), Postives = 141/250 (56.40%), Query Frame = 2
Query:   11 DVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMT-DGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAI 754
            DV L ++A +TPGF G               RR K+ I + +ID++ DR++AG      T   K + LVAYHE GH I G +      V KVT+VPRG+A G    +P +D  L+SK+ +  ++ G +GGR AEE+IF     TTGA+ D +Q T +A+ MVT +GMSE +GP    +G+ +  ++     + S+SE+ A +ID  V+ L + A   A   I++NRE    I E LL+ ET+   + +A+
Sbjct:  378 DVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMSEKLGPVQ-YEGNHA--MLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKAL 622          
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH_RICPR (Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.163e-36
Identity = 90/260 (34.62%), Postives = 144/260 (55.38%), Query Frame = 2
Query:   26 VIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGM-EGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS-EFVEILAENRVP 796
            +IA  TPGFSG               R GK  +   +++++ D+++ G+   ++    K K L AYHE GHA+ G   P   P+ K T++PRG A G+   +P  D    +++Q+ + I   + GR AEE+IFG  +VT+GA+ D++  T +A+ MVT  G+S+ IGP  +  GS S D+  R  + N +SE  AE IDA VKR+  + YE A   +  + + +  +   L+E ET+SG + + +LS   ++   EN+ P
Sbjct:  351 IIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGP--IFHGSNSDDMYGR-QSSNEISEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLSGRALDSEEENKFP 607          
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.163e-36
Identity = 99/270 (36.67%), Postives = 151/270 (55.93%), Query Frame = 2
Query:   14 VSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAG--MEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLM--DGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEILAEN-RVPPAV 805
            +SL  +A RTPGFSG               R  +  I+  +ID++IDR++AG   +  V++D + + LVAYHE GHA+ G     +D VQK+T++PRGQA G T   P S D  L  K  L A I   +GGRAAEE I+G  E+TTGA+ D  + T +A+ MVT  GMS++G    +   G+   +V +        SE+ A+DID  +  + +  Y+ A + I++NR+ ++ +VE LL  ET        IL   ++ + +N ++PP +
Sbjct:  423 ISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRVIAGPAKKSRVISD-EDRKLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYTLSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMVTQLGMSKLGQVQYVPSQGTLPSNVKL-------YSEQTAKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAET--------ILKSDIDFIHKNTKLPPEI 676          
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.518e-36
Identity = 98/269 (36.43%), Postives = 146/269 (54.28%), Query Frame = 2
Query:   14 VSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAG--MEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEILAENRVPPAVPA 811
            +SL  +A RTPGFSG               R  +  I+  +ID++IDR++AG   +  V++D   K LVAYHE GHA+ G     +D VQK+T++PRGQA G T   P S D  L  K  L A I   +GGRAAEE I+G  E+TTGA+ D  + T +A+ MVT  GMS++G    +    +     ++      SE+ A+DID  +  + +  Y+ A + I+ NR+ ++ +VE LL  ET+       + S+   I    ++PP + A
Sbjct:  420 ISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVIAGPAKKSRVVSDADRK-LVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYTLSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGPLEITTGASSDFYKATNIARAMVTQLGMSKLGQVQYVPSQGTVPPGTKL-----FSEQTAKDIDFEINAIIEEQYKKARTIIKTNRKELELLVEALLIAETI-------LKSDIDYIHEHTKLPPEILA 675          
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.983e-36
Identity = 89/260 (34.23%), Postives = 145/260 (55.77%), Query Frame = 2
Query:   26 VIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGM-EGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS-EFVEILAENRVP 796
            +IA  TPGFSG               R GK  +   +++++ D+++ G+   ++    K K L AYHE GHA+ G   P   P+ K T++PRG A G+   +P  D    +++Q+ + I   + GR AEE+IFG+ +VT+GAA D++  T +A+ MVT  G+S+ IGP  +  GS S D+  R  + N +SE  A+ IDA VK++  + YE A   +  + + +  +   L+E ET+SG + + +LS   ++   EN+ P
Sbjct:  351 IIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGKNKVTSGAASDIKGATNIARAMVTKAGLSDLIGP--IFHGSSSDDMYGRQQS-NEISEATAKLIDAEVKKIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLSGRALDSEEENKFP 607          
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.590e-36
Identity = 99/279 (35.48%), Postives = 150/279 (53.76%), Query Frame = 2
Query:   11 DVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEILAENR----------VPPAVPA 811
            DV L +IA  TPGFSG                 G   ++  +++ + DRI+ G E    V++D +S+ L A+HE GHA+    T G  PV K T+VPRG A G+   +P  D T IS++Q+ AR+   +GGR AEE+IFGE EVT+GA+ DL+Q T LA+ MVT FGMS+       +   +G          SMS +    I++ VK+L ++AY  A + +    + +  +   LL+ ET+SG + + +L++    L + R          VPP+ P+
Sbjct:  415 DVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAKDRIMMGSERKSAVISD-ESRKLTAFHEGGHALVAIHTEGALPVHKATIVPRGMALGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQATKLARAMVTKFGMSKEVGLVAHNYDDNG---------KSMSTETRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELLTDLNSPLLQKRQEVVTKQSNPVPPSTPS 683          
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH_RICCN (Cell division protease ftsH homolog OS=Rickettsia conorii GN=ftsH PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.383e-36
Identity = 90/260 (34.62%), Postives = 142/260 (54.62%), Query Frame = 2
Query:   26 VIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGM-EGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS-EFVEILAENRVP 796
            +IA  TPGFSG               R GK  +   +++++ D+++ G+   ++    K K L AYHE GHA+ G   P   P+ K T++PRG A G+   +P  D    +++Q+ + I   + GR AEE+IFG  +VT+GA+ D++  T +A+ MVT  G+S+ IGP  +  GS SGD +      N  SE  AE IDA VKR+  + YE A   +  + + +  +   L+E ET+SG + + +LS   ++   EN+ P
Sbjct:  351 IIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGP--IFHGS-SGDDMYGRQPNNETSEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLSGRALDSEEENKFP 607          
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.418e-36
Identity = 83/248 (33.47%), Postives = 142/248 (57.26%), Query Frame = 2
Query:   26 VIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS 760
            +IA  TPGFSG               RR K  +   +++++ D+++ G+E    +M+D + K L AYHE GHA+ G      DP+ K T++PRG+A G+   +P +D   + + ++ A I   + GR AEE+IFG+ +VT+GA+ D++  T +AK MVT +G+S+ +GP  +  GS S D+     + +  SE  +E ID  VK++    Y++A   +  + + +  + + L+E ET+SG + + +LS
Sbjct:  351 IIARGTPGFSGAELANLVNEATLIAARRNKKEVEMHDLEEAKDKVMMGVERRSMIMSD-EQKKLTAYHEGGHALVGLYCLASDPIHKATIIPRGRALGMVMRLPENDRFSMPRDKMEADIAVAMAGRVAEEIIFGKEKVTSGASSDIKMATRMAKAMVTDWGLSDKVGP--VYHGSASEDMYTNRNSSSDRSESTSELIDEEVKKIVTTGYDLAKDILTKHLDQLHILAKALIEYETLSGQQIKNLLS 595          
The following BLAST results are available for this feature:
BLAST of CK938909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
FTSHB_ARATH8.902e-3737.85Cell division protease ftsH homolog 11, chloroplas... [more]
FTSH_STRR61.163e-3637.60Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_STRPN1.163e-3637.60Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_RICPR1.163e-3634.62Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_MYCGE1.163e-3636.67Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_MYCPN1.518e-3636.43Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_RICTY1.983e-3634.23Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH4_ARATH2.590e-3635.48Cell division protease ftsH homolog 4, mitochondri... [more]
FTSH_RICCN3.383e-3634.62Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICBR4.418e-3633.47Cell division protease ftsH homolog OS=Rickettsia ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_G01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938909 ID=CK938909; Name=CK938909; organism=Citrus sinensis; type=EST; length=817bp
GGGTGATGCAGATGTGTCTCTTGATGTGATAGCCATGAGAACACCTGGGT
TCAGTGGTGCTGACCTTGCAAACCTCTTAAATGAGGCTGCTATATTGGCT
GGACGACGCGGGAAAGCTGCTATTTCATCTAAAGAGATTGATGATTCGAT
TGATAGGATTGTGGCTGGAATGGAAGGAACTGTCATGACAGATGGGAAGA
GTAAAAGTCTTGTTGCATACCATGAAGTTGGCCACGCAATATGCGGAACT
TTGACTCCAGGACACGATCCCGTTCAAAAAGTCACCCTTGTTCCACGTGG
TCAGGCAAGAGGTCTTACCTGGTTCATCCCTTCAGATGACCCCACCTTGA
TATCGAAGCAGCAGCTCTTTGCAAGAATTGTTGGTGGACTCGGTGGTAGA
GCTGCTGAGGAAGTGATTTTTGGAGAGCCTGAAGTGACAACAGGAGCAGC
TGGTGATTTGCAGCAGATCACTGGTTTGGCCAAACAGATGGTAACCACAT
TTGGAATGTCTGAAATTGGCCCATGGTCGCTCATGGACGGATCACAAAGT
GGTGATGTCATCATGAGAATGATGGCAAGGAACTCAATGTCTGAGAAGCT
TGCTGAAGACATTGATGCTGCAGTCAAGAGACTATCAGACCGTGCCTATG
AGATTGCGTTGAGCCAAATAAGGAACAACCGTGAAGCCATTGACAAGATC
GTGGAAGTTCTTCTTGAGAAGGAAACAATGTCAGGGGATGAATTCCGGGC
AATCCTCTCAGAGTTTGTCGAAATCCTAGCTGAGAATAGGGTCCCTCCAG
CTGTTCCAGCACCATNN
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