CK938909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.348e-29 Identity = 78/247 (31.58%), Postives = 131/247 (53.04%), Query Frame = 2 Query: 29 IAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQ-ARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSE 763 +A TPGFSG R + A+ + +I+R++ G+E + + + K +VAYHE GHA+CG DP+ KV+++PRGQ A G ++P D L+++QQL R+ LGGR +EE+ F P VT+GA+ D +++T +A MVT GMS+ W D+ S++ + ID+ V R+ ++ ++ E ++KI +VLL+KE ++ ++ +L + Sbjct: 548 LAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPG-DIFLLTEQQLKDRMTMSLGGRVSEELHF--PSVTSGASDDFKKVTSMATAMVTELGMSDKIGWVNYQKRDDSDL------TKPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGK 785
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.067e-29 Identity = 84/252 (33.33%), Postives = 126/252 (50.00%), Query Frame = 2 Query: 5 DADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 757 D V ++IA T GFSG GK ++ KE++ S D+I+ G E +V D K+K++ AYHE GHAI T P+ K T++PRG G +P +D + QL A++ +GGR AEE+IFG +TTGA+ D T +AK+MVT FGMSE +M S +G +S + I+ ++ L +YE A ++ + + + E LL ET+ E + +L Sbjct: 468 DKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSE--KLGVMTYSDTG----------KLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVL 707
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.067e-29 Identity = 79/244 (32.38%), Postives = 126/244 (51.64%), Query Frame = 2 Query: 29 IAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 757 +A TPGFSG R AI+ K + +I+R++ G+E T + + K VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +K+QL R+ LGGR +EE+ FG +TTGA DL+++T A + FGM+E D + GD+++ SE A ID V+ L AY ++ + + ++K+ +LLEKE + ++ +L Sbjct: 508 LASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVL----EKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQLL 744
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 5.231e-29 Identity = 78/244 (31.97%), Postives = 128/244 (52.46%), Query Frame = 2 Query: 29 IAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 757 +A TPGFSG R +I+ K + +I+R++ G+E T + + K VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +K+QL R+ LGGR +EE+ FG +TTGA DL+++T A + FGM+E D + GD+++ SE A ID V+ L + AY+ ++ + + ++K+ +LLEKE + ++ +L Sbjct: 509 LASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVL----EKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELL 745
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.522e-28 Identity = 77/244 (31.56%), Postives = 128/244 (52.46%), Query Frame = 2 Query: 29 IAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 757 +A TPGFSG R +I+ K + +I+R++ G+E T + + K VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +++QL R+ LGGR +EE+ FG +TTGA DL+++T A + FGM+E D + GD+++ SE A ID V+ L + AY+ ++ + + ++K+ +LLEKE + ++ +L Sbjct: 510 LASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPREQ-YLYTREQLLDRMCMTLGGRVSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVL----EKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELL 746
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.988e-28 Identity = 80/247 (32.39%), Postives = 126/247 (51.01%), Query Frame = 2 Query: 5 DADVSLDVIAMR----TPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETM 730 D +S D ++ + TPGF+G R ++ + + +I+R++ G+E T + K+ VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +++QLF R+ LGGR AE++ FG ++TTGA DL+++T A + FGMSE D + G+ M SE A+ ID V+ L AY L + RE ++K+ LLEKE + Sbjct: 489 DGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQYLPREQ-FLYTREQLFDRMCMMLGGRVAEQLFFG--QITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQGET----MVEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVL 728
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.596e-28 Identity = 83/246 (33.74%), Postives = 127/246 (51.63%), Query Frame = 2 Query: 29 IAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQ-ARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 757 +A TPGF+G R I+ + +I+R++AG+E T + + K VAYHE GHA+CG DP+ KV+++PRGQ A G ++P D LIS++Q R++ LGGR +EE+ F P VT+GA D +++T +A MVT+ GMS +IG S + V S K A ID VK + D A+ + N + +D + + LL KE ++ ++ +L Sbjct: 493 LATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQ-YLISEEQFRHRMIMALGGRVSEELHF--PSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGNFKV------NKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLL 729
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.784e-28 Identity = 81/248 (32.66%), Postives = 128/248 (51.61%), Query Frame = 2 Query: 29 IAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSE 763 +A TPGF+G R I+ + + +IDR++ G+E K + VAYHE GHA+ G +P+ KVT+VPRG A G ++P+D+ L++K+QLF LGGRAAEEV+ G +++TGA DL+++T + V +G SE +G S ++ S + A ID V+ +AYE + I+ +++ + +I E+LLEKE + D+ +L E Sbjct: 520 LAALTPGFAGADIANVCNEAALIAARSEGTLITMQHFESAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDN-LLMTKEQLFDMTCMTLGGRAAEEVLIG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDGFEM------SKPYSSQTASIIDTEVREWVAKAYEKTVELIKQHKDQVAQIAELLLEKEVLHQDDLVQVLGE 758
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.865e-28 Identity = 73/251 (29.08%), Postives = 136/251 (54.18%), Query Frame = 2 Query: 11 DVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 757 DV L +IA T GF+G + A+S ++++ S DRI+ G E + ++K + AYHE GHA+ T K T++PRG + G+T +P D ++++ A + +GGRAAEE+++G+ ++T+GA D+ + T +A++MVT FGMS+ IGP SL +++S +++ +K L + +YE +LS ++++++ +D + L++ E ++ +E ++ Sbjct: 459 DVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKATIMPRGSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDKATQVARRMVTEFGMSDRIGPVSL------------EAEMDNLSPATRALVESEIKSLLEASYERSLSLLKSHKKELDALATALVDYEFLTAEEMNRVV 697
BLAST of CK938909 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.865e-28 Identity = 83/247 (33.60%), Postives = 126/247 (51.01%), Query Frame = 2 Query: 29 IAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSE 763 +A TPGF+G R + I+ + + +IDRI+ G+E K + VAYHE GHA+ G +P+ KVT+VPRG A G ++P+++ L++K+QLF LGGRAAEEV+ G ++TGA DL+++T + V +G SE L+ Q D S + A ID V+ +AY+ + I ++E + KI E+LLEKE + D+ +L E Sbjct: 535 LAALTPGFAGADIANVCNEAALIAARSEETQITMQHFESAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEEVLIG--RISTGAQNDLEKVTKMTYAQVAVYGFSE--KVGLLSFPQRDD---GFEMTKPYSNQTASIIDDEVREWVGKAYKKTVELITEHKEQVAKIAEMLLEKEVLHQDDLVRVLGE 773 The following BLAST results are available for this feature:
BLAST of CK938909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938909 ID=CK938909; Name=CK938909; organism=Citrus sinensis; type=EST; length=817bpback to top |