CK938881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938881 vs. ExPASy Swiss-Prot
Match: RR11_DIOEL (30S ribosomal protein S11, chloroplastic OS=Dioscorea elephantipes GN=rps11 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.493e-37 Identity = 79/104 (75.96%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 321 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGC 632 KGVIHVQASFNNTIVTV+DVRG+VISW+SA P+AAQ AA NAIR + DQ MQRAEVMIKG G GRDAALRAIRRSGILL+FVRDVTPMPHNGC Sbjct: 27 KGVIHVQASFNNTIVTVSDVRGQVISWASAGTSGFKGTRRGTPYAAQAAAVNAIRTIIDQDMQRAEVMIKGAGFGRDAALRAIRRSGILLSFVRDVTPMPHNGC 130
BLAST of CK938881 vs. ExPASy Swiss-Prot
Match: RR11_ANGEV (30S ribosomal protein S11, chloroplastic OS=Angiopteris evecta GN=rps11 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.958e-37 Identity = 75/104 (72.12%), Postives = 86/104 (82.69%), Query Frame = 3 Query: 321 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGC 632 KGVIH+QASFNNTIVTVTD+RG+V+SWSSA PFAAQTAA NAIR + DQGM++AEVMI GPG GR+ ALRAIRRSG++L+FVRDVTPMPHNGC Sbjct: 19 KGVIHIQASFNNTIVTVTDIRGQVVSWSSAGACGFKGTRKSTPFAAQTAAENAIRTLIDQGMKQAEVMISGPGPGRETALRAIRRSGVVLSFVRDVTPMPHNGC 122
BLAST of CK938881 vs. ExPASy Swiss-Prot
Match: RR11_ANEMR (30S ribosomal protein S11, plastid OS=Aneura mirabilis GN=rps11 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.782e-37 Identity = 75/104 (72.12%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 321 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGC 632 +GVIH+QASFNNTI+TVTD RGRV+SWSSA PFAAQTAA NAIR + D+G+++AEVMI GPG GRD ALRAIRRSGI+LNFVRDVTPMPHNGC Sbjct: 19 RGVIHIQASFNNTIITVTDTRGRVVSWSSAGACGFKGARKSTPFAAQTAAENAIRILIDRGLKQAEVMISGPGPGRDTALRAIRRSGIVLNFVRDVTPMPHNGC 122
BLAST of CK938881 vs. ExPASy Swiss-Prot
Match: RR11_PINTH (30S ribosomal protein S11, chloroplastic OS=Pinus thunbergii GN=rps11 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.862e-36 Identity = 76/104 (73.08%), Postives = 83/104 (79.81%), Query Frame = 3 Query: 321 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGC 632 KGVI+VQASFNNTIVT TDVRG+V+SWSSA PFAAQTAA N IRA+ D+GM+R EVMI GPG GRD ALR IRRSGILL+FVRDVTPMPHNGC Sbjct: 19 KGVIYVQASFNNTIVTATDVRGQVLSWSSAGACGFKGTRRGTPFAAQTAAENVIRALMDRGMERVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHNGC 122
BLAST of CK938881 vs. ExPASy Swiss-Prot
Match: RR11_CHAGL (30S ribosomal protein S11, chloroplastic OS=Chaetosphaeridium globosum GN=rps11 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.124e-35 Identity = 74/104 (71.15%), Postives = 83/104 (79.81%), Query Frame = 3 Query: 321 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGC 632 KGVIH+QASFNNTIVT+TDVRG+VISWSSA PFAAQTAA A+R + DQGM++AEVMI GPG GRD ALR IR+SGI LNFVRDVTP+PHNGC Sbjct: 19 KGVIHIQASFNNTIVTITDVRGQVISWSSAGACGFKGAKKSTPFAAQTAAEKALRPLIDQGMRQAEVMISGPGRGRDTALRIIRKSGITLNFVRDVTPIPHNGC 122
BLAST of CK938881 vs. ExPASy Swiss-Prot
Match: RR11_ANTFO (30S ribosomal protein S11, chloroplastic OS=Anthoceros formosae GN=rps11 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.468e-35 Identity = 72/104 (69.23%), Postives = 85/104 (81.73%), Query Frame = 3 Query: 321 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGC 632 +GV H+QASFNNTI+TVTDVRG+V+SWSSA PFAAQTAA NAIR + DQGM++AEVMI GPG GRD ALRAIRRSG++L++VRDVTP+PHNGC Sbjct: 19 RGVTHIQASFNNTIITVTDVRGQVVSWSSAGACGFKGTKKSTPFAAQTAAENAIRILIDQGMKQAEVMISGPGPGRDTALRAIRRSGVVLSYVRDVTPIPHNGC 122
BLAST of CK938881 vs. ExPASy Swiss-Prot
Match: RR11_PINKO (30S ribosomal protein S11, chloroplastic OS=Pinus koraiensis GN=rps11 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.577e-35 Identity = 75/104 (72.12%), Postives = 81/104 (77.88%), Query Frame = 3 Query: 321 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGC 632 KGVI+VQASFNNTIVT TDVRG+VISWSSA PFAAQTAA N IR + D+G+ R EVMI GPG GRD ALR IRRSGILL+FVRDVTPMPHNGC Sbjct: 19 KGVIYVQASFNNTIVTATDVRGQVISWSSAGACGFKGTRRGTPFAAQTAAENVIRTLMDRGIGRVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHNGC 122
BLAST of CK938881 vs. ExPASy Swiss-Prot
Match: RR11_STAPU (30S ribosomal protein S11, chloroplastic OS=Staurastrum punctulatum GN=rps11 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.283e-35 Identity = 73/104 (70.19%), Postives = 83/104 (79.81%), Query Frame = 3 Query: 321 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGC 632 KGVIHVQASFNNTIVTVTDVRG+ +SWSSA PFAAQTAA NAI + DQGM++AEVMI GPG GRD ALRAI+ SG++++FVRDVTPMPHNGC Sbjct: 19 KGVIHVQASFNNTIVTVTDVRGQTMSWSSAGSCGFKGAKKSTPFAAQTAAENAISLLIDQGMRQAEVMISGPGPGRDTALRAIKNSGLVISFVRDVTPMPHNGC 122
BLAST of CK938881 vs. ExPASy Swiss-Prot
Match: RR11_ZYGCR (30S ribosomal protein S11, chloroplastic OS=Zygnema circumcarinatum GN=rps11 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.513e-35 Identity = 73/104 (70.19%), Postives = 82/104 (78.85%), Query Frame = 3 Query: 321 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGC 632 KGVIHVQASFNNTI+T+TDVRG+VISWSSA PFAAQ AA NA+R + DQGM++AEVM+ GPG GRD ALRAI SGI L+FVRDVTPMPHNGC Sbjct: 19 KGVIHVQASFNNTIITITDVRGQVISWSSAGASGFKAAKKSTPFAAQIAAENALRVLIDQGMKQAEVMLSGPGRGRDTALRAIINSGIQLSFVRDVTPMPHNGC 122
BLAST of CK938881 vs. ExPASy Swiss-Prot
Match: RR11_ADICA (30S ribosomal protein S11, chloroplastic OS=Adiantum capillus-veneris GN=rps11 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 9.513e-35 Identity = 72/104 (69.23%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 321 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFVRDVTPMPHNGC 632 KGVIH+QASFNNTI+TVTDVRG+VI WSSA PFAAQ AA NAI+A D+GM++AEVM+ GPG GRD ALRAIRRSGI+L+F+RDVTPMP+NGC Sbjct: 19 KGVIHIQASFNNTIITVTDVRGQVIIWSSAGACGFKGTRKSTPFAAQAAAENAIKASVDRGMKQAEVMMSGPGPGRDTALRAIRRSGIILSFIRDVTPMPYNGC 122 The following BLAST results are available for this feature:
BLAST of CK938881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938881 ID=CK938881; Name=CK938881; organism=Citrus sinensis; type=EST; length=890bpback to top |